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PMC:7049657 / 3220-4363 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
109 349-364 Species denotes new Coronavirus Tax:2697049
110 377-384 Species denotes patient Tax:9606
111 423-431 Species denotes SARS-CoV Tax:694009
112 450-460 Species denotes SARS-CoV-2 Tax:2697049
113 570-575 Species denotes human Tax:9606
114 655-669 Species denotes Paguma larvata Tax:9675
115 679-690 Species denotes raccoon dog Tax:34880
116 692-716 Species denotes Nyctereutes procyonoides Tax:34880
117 101-122 Disease denotes respiratory infection MESH:D012141
118 1012-1021 Disease denotes infection MESH:D007239
119 1113-1119 Disease denotes deaths MESH:D003643

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T115 59-66 GO:0007605 denotes hearing
T114 101-112 UBERON:0001004 denotes respiratory
T113 214-218 SP_10 denotes SARS
T112 353-364 NCBITaxon:11118 denotes Coronavirus
T111 372-376 SP_10 denotes SARS
T110 398-403 NCBITaxon:10239 denotes virus
T109 423-431 SP_10 denotes SARS-CoV
T108 433-437 SP_10 denotes SARS
T107 450-460 SP_7 denotes SARS-CoV-2
T106 552-556 SP_2;NCBITaxon:9397 denotes bats
T105 570-575 SP_6;NCBITaxon:9606 denotes human
T104 632-641 NCBITaxon:9347 denotes Himalayan
T103 642-652 SP_5 denotes palm civet
T102 655-669 SP_5 denotes Paguma larvata
T101 679-686 NCBITaxon:9654 denotes raccoon
T100 687-690 SP_4;NCBITaxon:9615 denotes dog
T99 692-716 NCBITaxon:34880 denotes Nyctereutes procyonoides
T98 905-909 SP_10 denotes SARS
T97 1007-1011 SP_10 denotes SARS
T96 1113-1119 GO:0016265 denotes deaths
T95 1129-1133 SP_10 denotes SARS

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T8 642-646 Body_part denotes palm http://purl.org/sig/ont/fma/fma24920

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T21 101-122 Disease denotes respiratory infection http://purl.obolibrary.org/obo/MONDO_0024355
T22 113-122 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T23 214-218 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T24 372-376 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T25 423-431 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T26 423-427 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T27 433-437 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T28 450-458 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T29 450-454 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T30 905-909 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T31 1007-1011 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T32 1012-1021 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T33 1129-1133 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T35 87-88 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T36 296-299 http://purl.obolibrary.org/obo/CL_0000990 denotes CDC
T37 347-348 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T38 370-371 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T39 398-403 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T40 552-556 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T41 570-575 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T42 679-686 http://purl.obolibrary.org/obo/NCBITaxon_9654 denotes raccoon
T43 744-745 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T44 775-781 http://purl.obolibrary.org/obo/UBERON_0000033 denotes headed
T45 775-781 http://www.ebi.ac.uk/efo/EFO_0000964 denotes headed
T46 802-814 http://purl.obolibrary.org/obo/OBI_0000245 denotes Organisation
T47 930-931 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T48 981-984 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T49 994-995 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T1 59-66 http://purl.obolibrary.org/obo/GO_0007605 denotes hearing

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T7 101-122 Phenotype denotes respiratory infection http://purl.obolibrary.org/obo/HP_0011947

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T21 0-432 Sentence denotes In the fall of 2002, the US National Security Agency began hearing “chatter” regarding a new serious respiratory infection in the Guangdong province of China and by the winter of 2002–2003 an alarming new disease, SARS, was making headlines worldwide. it was not until 24 March 2003, that the US CDC and Hong Kong announced that they had isolated a new Coronavirus from a SARS patient [7], and the virus received its name, SARS-CoV.
T22 433-722 Sentence denotes SARS, similar to SARS-CoV-2, originated in the Republic of China with evidence that while it most likely originated in bats, entered the human population through intermediate hosts, most likely the ‘Himalayan palm civet’ (Paguma larvata) and the raccoon dog (Nyctereutes procyonoides) [8].
T23 723-1033 Sentence denotes Thanks to the use of a massive international effort headed by the World Health Organisation (WHO), of case identification, isolation (quarantine), treatment, and contact tracing the SARS outbreak ended only a few months (July 2003), after it began and there has not been a documented SARS infection since 2004.
T24 1034-1143 Sentence denotes In total, there were approximately 8096 probably cases in 29 countries and 774 deaths from the SARS outbreak.