> top > docs > PMC:7039956 > spans > 7077-7692 > annotations

PMC:7039956 / 7077-7692 JSONTXT

Annnotations TAB JSON ListView MergeView

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
218 195-198 Gene denotes SFN Gene:104444
219 200-205 Gene denotes KRT6A Gene:16687
220 211-216 Gene denotes KRT10 Gene:16661
221 255-258 Gene denotes FAP Gene:14089
222 260-264 Gene denotes PDPN Gene:14726
223 266-272 Gene denotes COL1A2 Gene:12843
224 274-277 Gene denotes DCN Gene:13179
225 279-285 Gene denotes COL3A1 Gene:1281
226 287-293 Gene denotes COL6A1 Gene:1291
227 328-331 Gene denotes CD2 Gene:914
228 333-337 Gene denotes CD3D Gene:915
229 339-343 Gene denotes CD3E Gene:916
230 349-353 Gene denotes CD3G Gene:917
231 392-397 Gene denotes CD163 Gene:9332
232 399-404 Gene denotes CSF1R Gene:1436
233 416-422 Gene denotes FCGR2A Gene:2212
234 460-464 Gene denotes CMA1 Gene:1215
235 466-471 Gene denotes MS4A2 Gene:2206
236 473-479 Gene denotes TPSAB1 Gene:100503895
237 481-486 Gene denotes TPSB2 Gene:17229
238 521-527 Gene denotes SLAMF7 Gene:75345
239 529-534 Gene denotes FCRL5 Gene:329693
240 540-545 Gene denotes CD79A Gene:12518
241 593-599 Gene denotes PECAM1 Gene:18613
242 601-604 Gene denotes VWF Gene:22371
243 610-613 Gene denotes ENG Gene:13805

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T116 80-85 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T117 106-110 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T118 154-170 Body_part denotes epithelial cells http://purl.org/sig/ont/fma/fma66768
T119 165-170 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T120 219-230 Body_part denotes fibroblasts http://purl.org/sig/ont/fma/fma63877
T121 298-303 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T122 356-367 Body_part denotes macrophages http://purl.org/sig/ont/fma/fma63261
T123 425-435 Body_part denotes mast cells http://purl.org/sig/ont/fma/fma66784
T124 430-435 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T125 491-496 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T126 551-568 Body_part denotes endothelial cells http://purl.org/sig/ont/fma/fma66772
T127 563-568 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T28 255-258 Disease denotes FAP http://purl.obolibrary.org/obo/MONDO_0021055
T29 333-337 Disease denotes CD3D http://purl.obolibrary.org/obo/MONDO_0014280

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T125 73-75 http://purl.obolibrary.org/obo/CLO_0050507 denotes 22
T126 80-85 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T127 106-116 http://purl.obolibrary.org/obo/CL_0000000 denotes cell types
T128 139-141 http://purl.obolibrary.org/obo/CLO_0001236 denotes 2a
T129 154-164 http://purl.obolibrary.org/obo/CL_0000066 denotes epithelial
T130 165-170 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T131 179-184 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes
T132 219-230 http://purl.obolibrary.org/obo/CL_0000057 denotes fibroblasts
T133 239-244 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes
T134 296-303 http://purl.obolibrary.org/obo/CL_0000084 denotes T cells
T135 312-317 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes
T136 376-381 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes
T137 399-404 http://purl.obolibrary.org/obo/PR_000002062 denotes CSF1R
T138 406-410 http://purl.obolibrary.org/obo/PR_000002064 denotes CD68
T139 430-435 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T140 444-449 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes
T141 489-496 http://purl.obolibrary.org/obo/CL_0000236 denotes B cells
T142 505-510 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes
T143 551-568 http://purl.obolibrary.org/obo/CL_0000115 denotes endothelial cells
T144 577-582 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T13 255-258 Chemical denotes FAP http://purl.obolibrary.org/obo/CHEBI_73617

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T55 0-615 Sentence denotes After the data preprocessing (shown in section “Materials and methods”), 22 969 cells were acquired and 7 cell types were identified (Fig. 2a), including epithelial cells (marker genes including SFN, KRT6A, and KRT10), fibroblasts (marker genes including FAP, PDPN, COL1A2, DCN, COL3A1, COL6A1), T cells (marker genes including CD2, CD3D, CD3E, and CD3G), macrophages (marker genes including CD163, CSF1R, CD68, and FCGR2A), mast cells (marker genes including CMA1, MS4A2, TPSAB1, TPSB2), B cells (marker genes including SLAMF7, FCRL5, and CD79A) and endothelial cells (marker genes including PECAM1, VWF, and ENG).