PMC:549712 / 50498-51109
Annnotations
craft-sa-dev
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T14751 | 0-2 | DT | denotes | An |
T14752 | 11-15 | NN | denotes | line |
T14753 | 3-5 | NN | denotes | ES |
T14754 | 6-10 | NN | denotes | cell |
T14755 | 5-6 | HYPH | denotes | - |
T14756 | 73-83 | VBN | denotes | identified |
T14757 | 16-24 | VBG | denotes | carrying |
T14758 | 25-26 | DT | denotes | a |
T14759 | 43-49 | NN | denotes | vector |
T14760 | 27-28 | NN | denotes | β |
T14761 | 29-32 | NN | denotes | geo |
T14762 | 28-29 | HYPH | denotes | - |
T14763 | 33-37 | NN | denotes | gene |
T14764 | 38-42 | NN | denotes | trap |
T14765 | 37-38 | HYPH | denotes | - |
T14766 | 50-52 | IN | denotes | in |
T14767 | 53-56 | DT | denotes | the |
T14768 | 63-68 | NN | denotes | locus |
T14769 | 57-62 | NN | denotes | Ptdsr |
T14770 | 69-72 | VBD | denotes | was |
T14771 | 84-86 | IN | denotes | by |
T14772 | 87-96 | VBG | denotes | searching |
T14773 | 97-100 | DT | denotes | the |
T14774 | 113-121 | NN | denotes | database |
T14775 | 101-112 | NNP | denotes | BayGenomics |
T14776 | 122-123 | -LRB- | denotes | ( |
T14777 | 157-159 | CD | denotes | 48 |
T14778 | 123-134 | NNP | denotes | BayGenomics |
T14779 | 134-136 | , | denotes | , |
T14780 | 136-139 | NNP | denotes | San |
T14781 | 140-149 | NNP | denotes | Francisco |
T14782 | 149-151 | , | denotes | , |
T14783 | 151-154 | NNP | denotes | USA |
T14784 | 154-155 | : | denotes | ; |
T14785 | 156-157 | -LRB- | denotes | [ |
T14786 | 159-160 | -RRB- | denotes | ] |
T14787 | 160-161 | -RRB- | denotes | ) |
T14788 | 162-166 | IN | denotes | with |
T14789 | 167-170 | DT | denotes | the |
T14790 | 189-193 | NN | denotes | cDNA |
T14791 | 171-175 | JJ | denotes | full |
T14792 | 176-182 | NN | denotes | length |
T14793 | 175-176 | HYPH | denotes | - |
T14794 | 183-188 | NN | denotes | Ptdsr |
T14795 | 193-194 | . | denotes | . |
T14796 | 194-309 | sentence | denotes | A single ES-cell line was identified carrying the gene-trap in intron V, between exons V and VI of the Ptdsr gene. |
T14797 | 195-196 | DT | denotes | A |
T14798 | 212-216 | NN | denotes | line |
T14799 | 197-203 | JJ | denotes | single |
T14800 | 204-206 | NN | denotes | ES |
T14801 | 207-211 | NN | denotes | cell |
T14802 | 206-207 | HYPH | denotes | - |
T14803 | 232-240 | VBG | denotes | carrying |
T14804 | 217-220 | VBD | denotes | was |
T14805 | 221-231 | VBN | denotes | identified |
T14806 | 241-244 | DT | denotes | the |
T14807 | 250-254 | NN | denotes | trap |
T14808 | 245-249 | NN | denotes | gene |
T14809 | 249-250 | HYPH | denotes | - |
T14810 | 255-257 | IN | denotes | in |
T14811 | 258-264 | NN | denotes | intron |
T14812 | 265-266 | CD | denotes | V |
T14813 | 266-268 | , | denotes | , |
T14814 | 268-275 | IN | denotes | between |
T14815 | 276-281 | NNS | denotes | exons |
T14816 | 282-283 | CD | denotes | V |
T14817 | 284-287 | CC | denotes | and |
T14818 | 288-290 | CD | denotes | VI |
T14819 | 291-293 | IN | denotes | of |
T14820 | 294-297 | DT | denotes | the |
T14821 | 304-308 | NN | denotes | gene |
T14822 | 298-303 | NN | denotes | Ptdsr |
T14823 | 308-309 | . | denotes | . |
T14824 | 309-425 | sentence | denotes | Chimeric mice were generated by microinjection into CB20 blastocysts and transfer to pseudopregnant foster mothers. |
T14825 | 310-318 | JJ | denotes | Chimeric |
T14826 | 319-323 | NNS | denotes | mice |
T14827 | 329-338 | VBN | denotes | generated |
T14828 | 324-328 | VBD | denotes | were |
T14829 | 339-341 | IN | denotes | by |
T14830 | 342-356 | NN | denotes | microinjection |
T14831 | 357-361 | IN | denotes | into |
T14832 | 362-366 | NN | denotes | CB20 |
T14833 | 367-378 | NNS | denotes | blastocysts |
T14834 | 379-382 | CC | denotes | and |
T14835 | 383-391 | NN | denotes | transfer |
T14836 | 392-394 | IN | denotes | to |
T14837 | 395-409 | JJ | denotes | pseudopregnant |
T14838 | 417-424 | NNS | denotes | mothers |
T14839 | 410-416 | JJ | denotes | foster |
T14840 | 424-425 | . | denotes | . |
T14841 | 425-478 | sentence | denotes | Chimeric males were mated with 129P2/OlaHsd females. |
T14842 | 426-434 | JJ | denotes | Chimeric |
T14843 | 435-440 | NNS | denotes | males |
T14844 | 446-451 | VBN | denotes | mated |
T14845 | 441-445 | VBD | denotes | were |
T14846 | 452-456 | IN | denotes | with |
T14847 | 457-462 | NN | denotes | 129P2 |
T14848 | 463-469 | NN | denotes | OlaHsd |
T14849 | 462-463 | HYPH | denotes | / |
T14850 | 470-477 | NNS | denotes | females |
T14851 | 477-478 | . | denotes | . |
T14852 | 478-611 | sentence | denotes | Germ-line transmission of the mutant gene-trap allele was verified by expression analysis using β-galactosidase staining and RT-PCR. |
T14853 | 479-483 | NN | denotes | Germ |
T14854 | 484-488 | NN | denotes | line |
T14855 | 483-484 | HYPH | denotes | - |
T14856 | 489-501 | NN | denotes | transmission |
T14857 | 537-545 | VBN | denotes | verified |
T14858 | 502-504 | IN | denotes | of |
T14859 | 505-508 | DT | denotes | the |
T14860 | 526-532 | NN | denotes | allele |
T14861 | 509-515 | JJ | denotes | mutant |
T14862 | 516-520 | NN | denotes | gene |
T14863 | 521-525 | NN | denotes | trap |
T14864 | 520-521 | HYPH | denotes | - |
T14865 | 533-536 | VBD | denotes | was |
T14866 | 546-548 | IN | denotes | by |
T14867 | 549-559 | NN | denotes | expression |
T14868 | 560-568 | NN | denotes | analysis |
T14869 | 569-574 | VBG | denotes | using |
T14870 | 575-576 | NN | denotes | β |
T14871 | 577-590 | NN | denotes | galactosidase |
T14872 | 576-577 | HYPH | denotes | - |
T14873 | 591-599 | NN | denotes | staining |
T14874 | 600-603 | CC | denotes | and |
T14875 | 604-606 | NN | denotes | RT |
T14876 | 607-610 | NN | denotes | PCR |
T14877 | 606-607 | HYPH | denotes | - |
T14878 | 610-611 | . | denotes | . |
R8886 | T14751 | T14752 | det | An,line |
R8887 | T14752 | T14756 | nsubjpass | line,identified |
R8888 | T14753 | T14754 | compound | ES,cell |
R8889 | T14754 | T14752 | compound | cell,line |
R8890 | T14755 | T14754 | punct | -,cell |
R8891 | T14757 | T14752 | acl | carrying,line |
R8892 | T14758 | T14759 | det | a,vector |
R8893 | T14759 | T14757 | dobj | vector,carrying |
R8894 | T14760 | T14761 | compound | β,geo |
R8895 | T14761 | T14759 | compound | geo,vector |
R8896 | T14762 | T14761 | punct | -,geo |
R8897 | T14763 | T14764 | compound | gene,trap |
R8898 | T14764 | T14759 | compound | trap,vector |
R8899 | T14765 | T14764 | punct | -,trap |
R8900 | T14766 | T14757 | prep | in,carrying |
R8901 | T14767 | T14768 | det | the,locus |
R8902 | T14768 | T14766 | pobj | locus,in |
R8903 | T14769 | T14768 | compound | Ptdsr,locus |
R8904 | T14770 | T14756 | auxpass | was,identified |
R8905 | T14771 | T14756 | prep | by,identified |
R8906 | T14772 | T14771 | pcomp | searching,by |
R8907 | T14773 | T14774 | det | the,database |
R8908 | T14774 | T14772 | dobj | database,searching |
R8909 | T14775 | T14774 | compound | BayGenomics,database |
R8910 | T14776 | T14777 | punct | (,48 |
R8911 | T14777 | T14774 | parataxis | 48,database |
R8912 | T14778 | T14777 | dep | BayGenomics,48 |
R8913 | T14779 | T14778 | punct | ", ",BayGenomics |
R8914 | T14780 | T14781 | compound | San,Francisco |
R8915 | T14781 | T14778 | npadvmod | Francisco,BayGenomics |
R8916 | T14782 | T14778 | punct | ", ",BayGenomics |
R8917 | T14783 | T14778 | npadvmod | USA,BayGenomics |
R8918 | T14784 | T14777 | punct | ;,48 |
R8919 | T14785 | T14777 | punct | [,48 |
R8920 | T14786 | T14777 | punct | ],48 |
R8921 | T14787 | T14777 | punct | ),48 |
R8922 | T14788 | T14772 | prep | with,searching |
R8923 | T14789 | T14790 | det | the,cDNA |
R8924 | T14790 | T14788 | pobj | cDNA,with |
R8925 | T14791 | T14792 | amod | full,length |
R8926 | T14792 | T14790 | compound | length,cDNA |
R8927 | T14793 | T14792 | punct | -,length |
R8928 | T14794 | T14790 | compound | Ptdsr,cDNA |
R8929 | T14795 | T14756 | punct | .,identified |
R8930 | T14797 | T14798 | det | A,line |
R8931 | T14798 | T14803 | nsubjpass | line,carrying |
R8932 | T14799 | T14798 | amod | single,line |
R8933 | T14800 | T14801 | compound | ES,cell |
R8934 | T14801 | T14798 | compound | cell,line |
R8935 | T14802 | T14801 | punct | -,cell |
R8936 | T14804 | T14803 | auxpass | was,carrying |
R8937 | T14805 | T14803 | aux | identified,carrying |
R8938 | T14806 | T14807 | det | the,trap |
R8939 | T14807 | T14803 | dobj | trap,carrying |
R8940 | T14808 | T14807 | compound | gene,trap |
R8941 | T14809 | T14807 | punct | -,trap |
R8942 | T14810 | T14803 | prep | in,carrying |
R8943 | T14811 | T14810 | pobj | intron,in |
R8944 | T14812 | T14811 | nummod | V,intron |
R8945 | T14813 | T14811 | punct | ", ",intron |
R8946 | T14814 | T14811 | prep | between,intron |
R8947 | T14815 | T14816 | nmod | exons,V |
R8948 | T14816 | T14814 | pobj | V,between |
R8949 | T14817 | T14816 | cc | and,V |
R8950 | T14818 | T14816 | conj | VI,V |
R8951 | T14819 | T14816 | prep | of,V |
R8952 | T14820 | T14821 | det | the,gene |
R8953 | T14821 | T14819 | pobj | gene,of |
R8954 | T14822 | T14821 | compound | Ptdsr,gene |
R8955 | T14823 | T14803 | punct | .,carrying |
R8956 | T14825 | T14826 | amod | Chimeric,mice |
R8957 | T14826 | T14827 | nsubjpass | mice,generated |
R8958 | T14828 | T14827 | auxpass | were,generated |
R8959 | T14829 | T14827 | prep | by,generated |
R8960 | T14830 | T14829 | pobj | microinjection,by |
R8961 | T14831 | T14830 | prep | into,microinjection |
R8962 | T14832 | T14833 | compound | CB20,blastocysts |
R8963 | T14833 | T14831 | pobj | blastocysts,into |
R8964 | T14834 | T14830 | cc | and,microinjection |
R8965 | T14835 | T14830 | conj | transfer,microinjection |
R8966 | T14836 | T14835 | prep | to,transfer |
R8967 | T14837 | T14838 | amod | pseudopregnant,mothers |
R8968 | T14838 | T14836 | pobj | mothers,to |
R8969 | T14839 | T14838 | amod | foster,mothers |
R8970 | T14840 | T14827 | punct | .,generated |
R8971 | T14842 | T14843 | amod | Chimeric,males |
R8972 | T14843 | T14844 | nsubjpass | males,mated |
R8973 | T14845 | T14844 | auxpass | were,mated |
R8974 | T14846 | T14844 | prep | with,mated |
R8975 | T14847 | T14848 | compound | 129P2,OlaHsd |
R8976 | T14848 | T14850 | compound | OlaHsd,females |
R8977 | T14849 | T14848 | punct | /,OlaHsd |
R8978 | T14850 | T14846 | pobj | females,with |
R8979 | T14851 | T14844 | punct | .,mated |
R8980 | T14853 | T14854 | compound | Germ,line |
R8981 | T14854 | T14856 | compound | line,transmission |
R8982 | T14855 | T14854 | punct | -,line |
R8983 | T14856 | T14857 | nsubjpass | transmission,verified |
R8984 | T14858 | T14856 | prep | of,transmission |
R8985 | T14859 | T14860 | det | the,allele |
R8986 | T14860 | T14858 | pobj | allele,of |
R8987 | T14861 | T14860 | amod | mutant,allele |
R8988 | T14862 | T14863 | compound | gene,trap |
R8989 | T14863 | T14860 | compound | trap,allele |
R8990 | T14864 | T14863 | punct | -,trap |
R8991 | T14865 | T14857 | auxpass | was,verified |
R8992 | T14866 | T14857 | prep | by,verified |
R8993 | T14867 | T14868 | compound | expression,analysis |
R8994 | T14868 | T14866 | pobj | analysis,by |
R8995 | T14869 | T14857 | advcl | using,verified |
R8996 | T14870 | T14871 | compound | β,galactosidase |
R8997 | T14871 | T14873 | compound | galactosidase,staining |
R8998 | T14872 | T14871 | punct | -,galactosidase |
R8999 | T14873 | T14869 | dobj | staining,using |
R9000 | T14874 | T14873 | cc | and,staining |
R9001 | T14875 | T14876 | compound | RT,PCR |
R9002 | T14876 | T14873 | conj | PCR,staining |
R9003 | T14877 | T14876 | punct | -,PCR |
R9004 | T14878 | T14857 | punct | .,verified |
craft-ca-core-ex-dev
Below, discontinuous spans are shown in the chain model. You can change it to the bag model.
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T14431 | 3-10 | CL:0002322 | denotes | ES-cell |
T14432 | 6-10 | CL_GO_EXT:cell | denotes | cell |
T14433 | 27-32 | GO_EXT:beta_geo | denotes | β-geo |
T14434 | 33-42 | SO_EXT:gene_trap_or_trap_construct | denotes | gene-trap |
T14435 | 43-49 | SO_EXT:0000440 | denotes | vector |
T14436 | 57-62 | PR_EXT:000009218 | denotes | Ptdsr |
T14437 | 183-188 | PR_EXT:000009218 | denotes | Ptdsr |
T14438 | 189-193 | SO_EXT:cDNA | denotes | cDNA |
T14439 | 204-211 | CL:0002322 | denotes | ES-cell |
T14440 | 207-211 | CL_GO_EXT:cell | denotes | cell |
T14441 | 245-254 | SO_EXT:gene_trap_or_trap_construct | denotes | gene-trap |
T14442 | 258-264 | SO_EXT:0000188 | denotes | intron |
T14443 | 276-281 | SO_EXT:0000147 | denotes | exons |
T14444 | 298-303 | PR_EXT:000009218 | denotes | Ptdsr |
T14445 | 304-308 | SO_EXT:0000704 | denotes | gene |
T14446 | 319-323 | NCBITaxon:10088 | denotes | mice |
T14447 | 367-378 | UBERON:0000358 | denotes | blastocysts |
T14448 | 383-391 | GO_EXT:biological_movement_or_translocation_process | denotes | transfer |
T14449 | 435-440 | PATO_UBERON_EXT:male_or_bearer_of_maleness | denotes | males |
T14450 | 446-451 | GO:0007618 | denotes | mated |
T14451 | 470-477 | PATO_UBERON_EXT:female_or_bearer_of_femaleness | denotes | females |
T14452 | 509-515 | SO_EXT:sequence_altered_entity_or_alteration_process | denotes | mutant |
T14453 | 516-525 | SO_EXT:gene_trap_or_trap_construct | denotes | gene-trap |
T14454 | 526-532 | SO_EXT:0001023 | denotes | allele |
T14455 | 549-559 | GO:0010467 | denotes | expression |
T14456 | 575-590 | GO_EXT:0004565 | denotes | β-galactosidase |
T14457 | 604-606 | GO_EXT:reverse_transcription_or_reverse_transcriptase | denotes | RT |
craft-ca-core-dev
Below, discontinuous spans are shown in the chain model. You can change it to the bag model.
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T14345 | 3-10 | CL:0002322 | denotes | ES-cell |
T14346 | 33-37 | SO:0000704 | denotes | gene |
T14347 | 43-49 | SO:0000440 | denotes | vector |
T14348 | 57-62 | PR:000009218 | denotes | Ptdsr |
T14349 | 183-188 | PR:000009218 | denotes | Ptdsr |
T14350 | 204-211 | CL:0002322 | denotes | ES-cell |
T14351 | 245-249 | SO:0000704 | denotes | gene |
T14352 | 258-264 | SO:0000188 | denotes | intron |
T14353 | 276-281 | SO:0000147 | denotes | exons |
T14354 | 298-303 | PR:000009218 | denotes | Ptdsr |
T14355 | 304-308 | SO:0000704 | denotes | gene |
T14356 | 319-323 | NCBITaxon:10088 | denotes | mice |
T14357 | 367-378 | UBERON:0000358 | denotes | blastocysts |
T14358 | 446-451 | GO:0007618 | denotes | mated |
T14359 | 516-520 | SO:0000704 | denotes | gene |
T14360 | 526-532 | SO:0001023 | denotes | allele |
T14361 | 549-559 | GO:0010467 | denotes | expression |
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
15345036-12520002-55938561 | 157-159 | 12520002 | denotes | 48 |