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PMC:549712 / 3552-4005 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T1591 1-2 . denotes .
T1592 2-248 sentence denotes These include, for example, scavenger receptors and pattern recognition receptors such as CD36, SR-A and CD14, integrins such as the vitronectin receptor αvβ3, and members of the collectin family and their receptors CD91 and calreticulin [9-13].
T1593 3-8 DT denotes These
T1594 9-16 VBP denotes include
T1595 16-18 , denotes ,
T1596 18-21 IN denotes for
T1597 22-29 NN denotes example
T1598 29-31 , denotes ,
T1599 31-40 NN denotes scavenger
T1600 41-50 NNS denotes receptors
T1601 51-54 CC denotes and
T1602 55-62 NN denotes pattern
T1603 63-74 NN denotes recognition
T1604 75-84 NNS denotes receptors
T1605 85-89 JJ denotes such
T1606 90-92 IN denotes as
T1607 93-97 NN denotes CD36
T1608 97-99 , denotes ,
T1609 99-101 NN denotes SR
T1610 102-103 NN denotes A
T1611 101-102 HYPH denotes -
T1612 104-107 CC denotes and
T1613 108-112 NN denotes CD14
T1614 112-114 , denotes ,
T1615 114-123 NNS denotes integrins
T1616 124-128 JJ denotes such
T1617 129-131 IN denotes as
T1618 132-135 DT denotes the
T1619 148-156 NN denotes receptor
T1620 136-147 NN denotes vitronectin
T1621 157-161 NN denotes αvβ3
T1622 161-163 , denotes ,
T1623 163-166 CC denotes and
T1624 167-174 NNS denotes members
T1625 175-177 IN denotes of
T1626 178-181 DT denotes the
T1627 192-198 NN denotes family
T1628 182-191 NN denotes collectin
T1629 199-202 CC denotes and
T1630 203-208 PRP$ denotes their
T1631 209-218 NNS denotes receptors
T1632 219-223 NN denotes CD91
T1633 224-227 CC denotes and
T1634 228-240 NN denotes calreticulin
T1635 241-242 -LRB- denotes [
T1636 242-243 CD denotes 9
T1637 243-244 SYM denotes -
T1638 244-246 CD denotes 13
T1639 246-247 -RRB- denotes ]
T1640 247-248 . denotes .
T1641 248-436 sentence denotes The individual roles of these molecules in binding, phagocytosis or transduction of anti-inflammatory signals upon apoptotic cell recognition have not been well defined, however [5,6,14].
T1642 249-252 DT denotes The
T1643 264-269 NNS denotes roles
T1644 253-263 JJ denotes individual
T1645 410-417 VBN denotes defined
T1646 270-272 IN denotes of
T1647 273-278 DT denotes these
T1648 279-288 NNS denotes molecules
T1649 289-291 IN denotes in
T1650 292-299 NN denotes binding
T1651 299-301 , denotes ,
T1652 301-313 NN denotes phagocytosis
T1653 314-316 CC denotes or
T1654 317-329 NN denotes transduction
T1655 330-332 IN denotes of
T1656 333-350 JJ denotes anti-inflammatory
T1657 351-358 NNS denotes signals
T1658 359-363 IN denotes upon
T1659 364-373 JJ denotes apoptotic
T1660 374-378 NN denotes cell
T1661 379-390 NN denotes recognition
T1662 391-395 VBP denotes have
T1663 396-399 RB denotes not
T1664 400-404 VBN denotes been
T1665 405-409 RB denotes well
T1666 417-419 , denotes ,
T1667 419-426 RB denotes however
T1668 427-428 -LRB- denotes [
T1669 432-434 CD denotes 14
T1670 428-429 CD denotes 5
T1671 429-430 , denotes ,
T1672 430-431 CD denotes 6
T1673 431-432 , denotes ,
T1674 434-435 -RRB- denotes ]
T1675 435-436 . denotes .
T1677 437-440 DT denotes The
T1678 441-451 NN denotes importance
R543 T1593 T1594 nsubj These,include
R544 T1595 T1594 punct ", ",include
R545 T1596 T1594 prep for,include
R546 T1597 T1596 pobj example,for
R547 T1598 T1594 punct ", ",include
R548 T1599 T1600 compound scavenger,receptors
R549 T1600 T1594 dobj receptors,include
R550 T1601 T1600 cc and,receptors
R551 T1602 T1603 compound pattern,recognition
R552 T1603 T1604 compound recognition,receptors
R553 T1604 T1600 conj receptors,receptors
R554 T1605 T1606 amod such,as
R555 T1606 T1600 prep as,receptors
R556 T1607 T1606 pobj CD36,as
R557 T1608 T1607 punct ", ",CD36
R558 T1609 T1610 compound SR,A
R559 T1610 T1607 conj A,CD36
R560 T1611 T1610 punct -,A
R561 T1612 T1610 cc and,A
R562 T1613 T1610 conj CD14,A
R563 T1614 T1600 punct ", ",receptors
R564 T1615 T1600 conj integrins,receptors
R565 T1616 T1617 amod such,as
R566 T1617 T1615 prep as,integrins
R567 T1618 T1619 det the,receptor
R568 T1619 T1617 pobj receptor,as
R569 T1620 T1619 compound vitronectin,receptor
R570 T1621 T1619 appos αvβ3,receptor
R571 T1622 T1615 punct ", ",integrins
R572 T1623 T1615 cc and,integrins
R573 T1624 T1615 conj members,integrins
R574 T1625 T1624 prep of,members
R575 T1626 T1627 det the,family
R576 T1627 T1625 pobj family,of
R577 T1628 T1627 compound collectin,family
R578 T1629 T1624 cc and,members
R579 T1630 T1631 poss their,receptors
R580 T1631 T1624 conj receptors,members
R581 T1632 T1631 appos CD91,receptors
R582 T1633 T1632 cc and,CD91
R583 T1634 T1632 conj calreticulin,CD91
R584 T1635 T1636 punct [,9
R585 T1636 T1594 parataxis 9,include
R586 T1637 T1638 punct -,13
R587 T1638 T1636 prep 13,9
R588 T1639 T1636 punct ],9
R589 T1640 T1594 punct .,include
R590 T1642 T1643 det The,roles
R591 T1643 T1645 nsubjpass roles,defined
R592 T1644 T1643 amod individual,roles
R593 T1646 T1643 prep of,roles
R594 T1647 T1648 det these,molecules
R595 T1648 T1646 pobj molecules,of
R596 T1649 T1643 prep in,roles
R597 T1650 T1649 pobj binding,in
R598 T1651 T1650 punct ", ",binding
R599 T1652 T1650 conj phagocytosis,binding
R600 T1653 T1652 cc or,phagocytosis
R601 T1654 T1652 conj transduction,phagocytosis
R602 T1655 T1654 prep of,transduction
R603 T1656 T1657 amod anti-inflammatory,signals
R604 T1657 T1655 pobj signals,of
R605 T1658 T1654 prep upon,transduction
R606 T1659 T1660 amod apoptotic,cell
R607 T1660 T1661 compound cell,recognition
R608 T1661 T1658 pobj recognition,upon
R609 T1662 T1645 aux have,defined
R610 T1663 T1645 neg not,defined
R611 T1664 T1645 auxpass been,defined
R612 T1665 T1645 advmod well,defined
R613 T1666 T1645 punct ", ",defined
R614 T1667 T1645 advmod however,defined
R615 T1668 T1669 punct [,14
R616 T1669 T1645 parataxis 14,defined
R617 T1670 T1669 nummod 5,14
R618 T1671 T1669 punct ",",14
R619 T1672 T1669 nummod 6,14
R620 T1673 T1669 punct ",",14
R621 T1674 T1669 punct ],14
R622 T1675 T1645 punct .,defined
R623 T1677 T1678 det The,importance

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T1103 31-50 GO_EXT:0005044 denotes scavenger receptors
T1104 55-84 GO_EXT:0038187 denotes pattern recognition receptors
T1105 93-97 PR_EXT:000001905 denotes CD36
T1106 99-103 PR_EXT:000001885 denotes SR-A
T1107 108-112 PR_EXT:000001889 denotes CD14
T1108 114-123 GO_PR_EXT:integrin denotes integrins
T1109 148-156 GO_EXT:0004872 denotes receptor
T1110 157-161 GO:0034683 denotes αvβ3
T1111 209-218 GO_EXT:0004872 denotes receptors
T1112 219-223 PR_EXT:000002058 denotes CD91
T1113 228-240 PR_EXT:000004984 denotes calreticulin
T1114 279-288 CHEBI:36357 denotes molecules
T1115 292-299 CHEMINF_GO_EXT:chemical_binding_or_bond_formation denotes binding
T1116 301-313 GO:0006909 denotes phagocytosis
T1117 317-332 _FRAGMENT denotes transduction of
T1118 351-358 GO_EXT:cell_communication_or_signaling_or_signal_transduction denotes signals
T1119 338-350 GO_PATO_EXT:inflammatory_process_or_quality denotes inflammatory
T1120 364-373 GO_PATO_EXT:apoptotic_process_or_quality denotes apoptotic
T1121 364-378 CL:0000445 denotes apoptotic cell
T1122 374-378 CL_GO_EXT:cell denotes cell
R280 T1118 T1117 _lexicallyChainedTo signals,transduction of

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T890 93-97 PR:000001905 denotes CD36
T891 99-103 PR:000001885 denotes SR-A
T892 108-112 PR:000001889 denotes CD14
T893 157-161 GO:0034683 denotes αvβ3
T894 219-223 PR:000002058 denotes CD91
T895 228-240 PR:000004984 denotes calreticulin
T896 279-288 CHEBI:36357 denotes molecules
T897 301-313 GO:0006909 denotes phagocytosis
T898 364-378 CL:0000445 denotes apoptotic cell

2_test

Id Subject Object Predicate Lexical cue
15345036-9834113-55938476 242-243 9834113 denotes 9
15345036-8901603-55938476 242-243 8901603 denotes 9
15345036-9548256-55938476 242-243 9548256 denotes 9
15345036-1383273-55938476 242-243 1383273 denotes 9
15345036-11560994-55938476 242-243 11560994 denotes 9
15345036-15125832-55938477 428-429 15125832 denotes 5
15345036-12461569-55938478 430-431 12461569 denotes 6
15345036-14624843-55938479 432-434 14624843 denotes 14