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PMC:549712 / 25561-25878 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T7718 0-317 sentence denotes To re-examine and further independently validate the result of normal apoptotic cell uptake by Ptdsr -/- macrophages, we performed phagocytosis assays for 60 min and determined the percentage of macrophages that had engulfed apoptotic cells, in a total of at least 300 macrophages counted by fluorescence microscopy.
T7719 1-3 TO denotes To
T7720 4-14 VB denotes re-examine
T7721 122-131 VBD denotes performed
T7722 15-18 CC denotes and
T7723 19-26 RBR denotes further
T7724 41-49 VB denotes validate
T7725 27-40 RB denotes independently
T7726 50-53 DT denotes the
T7727 54-60 NN denotes result
T7728 61-63 IN denotes of
T7729 64-70 JJ denotes normal
T7730 86-92 NN denotes uptake
T7731 71-80 JJ denotes apoptotic
T7732 81-85 NN denotes cell
T7733 93-95 IN denotes by
T7734 96-101 NN denotes Ptdsr
T7735 106-117 NNS denotes macrophages
T7736 102-103 SYM denotes -
T7737 103-104 HYPH denotes /
T7738 104-105 SYM denotes -
T7739 117-119 , denotes ,
T7740 119-121 PRP denotes we
T7741 132-144 NN denotes phagocytosis
T7742 145-151 NNS denotes assays
T7743 152-155 IN denotes for
T7744 156-158 CD denotes 60
T7745 159-162 NNS denotes min
T7746 163-166 CC denotes and
T7747 167-177 VBD denotes determined
T7748 178-181 DT denotes the
T7749 182-192 NN denotes percentage
T7750 193-195 IN denotes of
T7751 196-207 NNS denotes macrophages
T7752 208-212 WDT denotes that
T7753 217-225 VBN denotes engulfed
T7754 213-216 VBD denotes had
T7755 226-235 JJ denotes apoptotic
T7756 236-241 NNS denotes cells
T7757 241-243 , denotes ,
T7758 243-245 IN denotes in
T7759 246-247 DT denotes a
T7760 248-253 NN denotes total
T7761 254-256 IN denotes of
T7762 257-259 RB denotes at
T7763 266-269 CD denotes 300
T7764 260-265 RBS denotes least
T7765 270-281 NNS denotes macrophages
T7766 282-289 VBN denotes counted
T7767 290-292 IN denotes by
T7768 293-305 NN denotes fluorescence
T7769 306-316 NN denotes microscopy
T7770 316-317 . denotes .
R4530 T7719 T7720 aux To,re-examine
R4531 T7720 T7721 advcl re-examine,performed
R4532 T7722 T7720 cc and,re-examine
R4533 T7723 T7724 advmod further,validate
R4534 T7724 T7720 conj validate,re-examine
R4535 T7725 T7724 advmod independently,validate
R4536 T7726 T7727 det the,result
R4537 T7727 T7724 dobj result,validate
R4538 T7728 T7727 prep of,result
R4539 T7729 T7730 amod normal,uptake
R4540 T7730 T7728 pobj uptake,of
R4541 T7731 T7732 amod apoptotic,cell
R4542 T7732 T7730 compound cell,uptake
R4543 T7733 T7730 prep by,uptake
R4544 T7734 T7735 nmod Ptdsr,macrophages
R4545 T7735 T7733 pobj macrophages,by
R4546 T7736 T7734 punct -,Ptdsr
R4547 T7737 T7734 punct /,Ptdsr
R4548 T7738 T7734 punct -,Ptdsr
R4549 T7739 T7721 punct ", ",performed
R4550 T7740 T7721 nsubj we,performed
R4551 T7741 T7742 compound phagocytosis,assays
R4552 T7742 T7721 dobj assays,performed
R4553 T7743 T7721 prep for,performed
R4554 T7744 T7745 nummod 60,min
R4555 T7745 T7743 pobj min,for
R4556 T7746 T7721 cc and,performed
R4557 T7747 T7721 conj determined,performed
R4558 T7748 T7749 det the,percentage
R4559 T7749 T7747 dobj percentage,determined
R4560 T7750 T7749 prep of,percentage
R4561 T7751 T7750 pobj macrophages,of
R4562 T7752 T7753 dep that,engulfed
R4563 T7753 T7751 relcl engulfed,macrophages
R4564 T7754 T7753 aux had,engulfed
R4565 T7755 T7756 amod apoptotic,cells
R4566 T7756 T7753 dobj cells,engulfed
R4567 T7757 T7747 punct ", ",determined
R4568 T7758 T7747 prep in,determined
R4569 T7759 T7760 det a,total
R4570 T7760 T7758 pobj total,in
R4571 T7761 T7760 prep of,total
R4572 T7762 T7763 advmod at,300
R4573 T7763 T7765 nummod 300,macrophages
R4574 T7764 T7763 advmod least,300
R4575 T7765 T7761 pobj macrophages,of
R4576 T7766 T7765 acl counted,macrophages
R4577 T7767 T7766 prep by,counted
R4578 T7768 T7769 compound fluorescence,microscopy
R4579 T7769 T7767 pobj microscopy,by
R4580 T7770 T7721 punct .,performed

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T6686 71-85 CL:0000445 denotes apoptotic cell
T6687 71-92 GO:0043652 denotes apoptotic cell uptake
T6688 81-85 CL_GO_EXT:cell denotes cell
T6689 96-101 PR_EXT:000009218 denotes Ptdsr
T6690 102-103 SO_EXT:sequence_nullness_or_absence denotes -
T6691 104-105 SO_EXT:sequence_nullness_or_absence denotes -
T6692 106-117 CL:0000235 denotes macrophages
T6693 132-144 GO:0006909 denotes phagocytosis
T6694 196-207 CL:0000235 denotes macrophages
T6695 226-235 GO_PATO_EXT:apoptotic_process_or_quality denotes apoptotic
T6696 226-241 CL:0000445 denotes apoptotic cells
T6697 236-241 CL_GO_EXT:cell denotes cells
T6698 270-281 CL:0000235 denotes macrophages

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T6404 71-85 CL:0000445 denotes apoptotic cell
T6405 71-92 GO:0043652 denotes apoptotic cell uptake
T6406 96-101 PR:000009218 denotes Ptdsr
T6407 106-117 CL:0000235 denotes macrophages
T6408 132-144 GO:0006909 denotes phagocytosis
T6409 196-207 CL:0000235 denotes macrophages
T6410 226-241 CL:0000445 denotes apoptotic cells
T6411 270-281 CL:0000235 denotes macrophages