> top > docs > PMC:549712 > spans > 20045-20397 > annotations

PMC:549712 / 20045-20397 JSONTXT

Annnotations TAB JSON ListView MergeView

craft-sa-dev

Id Subject Object Predicate Lexical cue
T5932 0-352 sentence denotes In summary, we observed a wide range of ocular malformations in Ptdsr-deficient mice that ranged from differentiation defects in retinal cell layers (for example, the inner granular layer) in mildly affected homozygotes to anophthalmia in severely affected Ptdsr -/- mice that was associated with induction of ectopic eye structures in nasal cavities.
T5933 1-3 IN denotes In
T5934 16-24 VBD denotes observed
T5935 4-11 NN denotes summary
T5936 11-13 , denotes ,
T5937 13-15 PRP denotes we
T5938 25-26 DT denotes a
T5939 32-37 NN denotes range
T5940 27-31 JJ denotes wide
T5941 38-40 IN denotes of
T5942 41-47 JJ denotes ocular
T5943 48-61 NNS denotes malformations
T5944 62-64 IN denotes in
T5945 65-70 NN denotes Ptdsr
T5946 71-80 JJ denotes deficient
T5947 70-71 HYPH denotes -
T5948 81-85 NNS denotes mice
T5949 86-90 WDT denotes that
T5950 91-97 VBD denotes ranged
T5951 98-102 IN denotes from
T5952 103-118 NN denotes differentiation
T5953 119-126 NNS denotes defects
T5954 127-129 IN denotes in
T5955 130-137 JJ denotes retinal
T5956 143-149 NNS denotes layers
T5957 138-142 NN denotes cell
T5958 150-151 -LRB- denotes (
T5959 183-188 NN denotes layer
T5960 151-154 IN denotes for
T5961 155-162 NN denotes example
T5962 162-164 , denotes ,
T5963 164-167 DT denotes the
T5964 168-173 JJ denotes inner
T5965 174-182 JJ denotes granular
T5966 188-189 -RRB- denotes )
T5967 190-192 IN denotes in
T5968 193-199 RB denotes mildly
T5969 200-208 VBN denotes affected
T5970 209-220 NNS denotes homozygotes
T5971 221-223 IN denotes to
T5972 224-236 NN denotes anophthalmia
T5973 237-239 IN denotes in
T5974 240-248 RB denotes severely
T5975 249-257 VBN denotes affected
T5976 268-272 NNS denotes mice
T5977 258-263 NN denotes Ptdsr
T5978 264-265 SYM denotes -
T5979 265-266 HYPH denotes /
T5980 266-267 SYM denotes -
T5981 273-277 WDT denotes that
T5982 282-292 VBN denotes associated
T5983 278-281 VBD denotes was
T5984 293-297 IN denotes with
T5985 298-307 NN denotes induction
T5986 308-310 IN denotes of
T5987 311-318 JJ denotes ectopic
T5988 323-333 NNS denotes structures
T5989 319-322 NN denotes eye
T5990 334-336 IN denotes in
T5991 337-342 JJ denotes nasal
T5992 343-351 NNS denotes cavities
T5993 351-352 . denotes .
R3541 T5933 T5934 prep In,observed
R3542 T5935 T5933 pobj summary,In
R3543 T5936 T5934 punct ", ",observed
R3544 T5937 T5934 nsubj we,observed
R3545 T5938 T5939 det a,range
R3546 T5939 T5934 dobj range,observed
R3547 T5940 T5939 amod wide,range
R3548 T5941 T5939 prep of,range
R3549 T5942 T5943 amod ocular,malformations
R3550 T5943 T5941 pobj malformations,of
R3551 T5944 T5939 prep in,range
R3552 T5945 T5946 npadvmod Ptdsr,deficient
R3553 T5946 T5948 amod deficient,mice
R3554 T5947 T5946 punct -,deficient
R3555 T5948 T5944 pobj mice,in
R3556 T5949 T5950 dep that,ranged
R3557 T5950 T5939 relcl ranged,range
R3558 T5951 T5950 prep from,ranged
R3559 T5952 T5953 compound differentiation,defects
R3560 T5953 T5951 pobj defects,from
R3561 T5954 T5953 prep in,defects
R3562 T5955 T5956 amod retinal,layers
R3563 T5956 T5954 pobj layers,in
R3564 T5957 T5956 compound cell,layers
R3565 T5958 T5959 punct (,layer
R3566 T5959 T5953 parataxis layer,defects
R3567 T5960 T5959 prep for,layer
R3568 T5961 T5960 pobj example,for
R3569 T5962 T5959 punct ", ",layer
R3570 T5963 T5959 det the,layer
R3571 T5964 T5959 amod inner,layer
R3572 T5965 T5959 amod granular,layer
R3573 T5966 T5959 punct ),layer
R3574 T5967 T5953 prep in,defects
R3575 T5968 T5969 advmod mildly,affected
R3576 T5969 T5970 amod affected,homozygotes
R3577 T5970 T5967 pobj homozygotes,in
R3578 T5971 T5951 prep to,from
R3579 T5972 T5971 pobj anophthalmia,to
R3580 T5973 T5972 prep in,anophthalmia
R3581 T5974 T5975 advmod severely,affected
R3582 T5975 T5976 amod affected,mice
R3583 T5976 T5973 pobj mice,in
R3584 T5977 T5976 nmod Ptdsr,mice
R3585 T5978 T5977 punct -,Ptdsr
R3586 T5979 T5977 punct /,Ptdsr
R3587 T5980 T5977 punct -,Ptdsr
R3588 T5981 T5982 dep that,associated
R3589 T5982 T5972 relcl associated,anophthalmia
R3590 T5983 T5982 auxpass was,associated
R3591 T5984 T5982 prep with,associated
R3592 T5985 T5984 pobj induction,with
R3593 T5986 T5985 prep of,induction
R3594 T5987 T5988 amod ectopic,structures
R3595 T5988 T5986 pobj structures,of
R3596 T5989 T5988 compound eye,structures
R3597 T5990 T5985 prep in,induction
R3598 T5991 T5992 amod nasal,cavities
R3599 T5992 T5990 pobj cavities,in
R3600 T5993 T5934 punct .,observed

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the bag model. You can change it to the chain model.

Id Subject Object Predicate Lexical cue
T5386 41-47 UBERON:0000970 denotes ocular
T5387 65-70 PR_EXT:000009218 denotes Ptdsr
T5388 81-85 NCBITaxon:10088 denotes mice
T5389 103-118 GO_RO_EXT:developmental_differentiation_process denotes differentiation
T5390 130-142 CL:0009004 denotes retinal cell
T5392 130-137,143-149 UBERON:0001781 denotes retinal layers
T5393 138-142 CL_GO_EXT:cell denotes cell
T5394 138-149 UBERON:0000119 denotes cell layers
T5395 168-188 UBERON:0001791 denotes inner granular layer
T5396 258-263 PR_EXT:000009218 denotes Ptdsr
T5397 264-265 SO_EXT:sequence_nullness_or_absence denotes -
T5398 266-267 SO_EXT:sequence_nullness_or_absence denotes -
T5399 268-272 NCBITaxon:10088 denotes mice
T5400 319-322 UBERON:0000970 denotes eye
T5401 337-351 UBERON:0001707 denotes nasal cavities

craft-ca-core-dev

Below, discontinuous spans are shown in the bag model. You can change it to the chain model.

Id Subject Object Predicate Lexical cue
T5275 41-47 UBERON:0000970 denotes ocular
T5276 65-70 PR:000009218 denotes Ptdsr
T5277 81-85 NCBITaxon:10088 denotes mice
T5278 130-142 CL:0009004 denotes retinal cell
T5280 130-137,143-149 UBERON:0001781 denotes retinal layers
T5281 138-149 UBERON:0000119 denotes cell layers
T5282 168-188 UBERON:0001791 denotes inner granular layer
T5283 258-263 PR:000009218 denotes Ptdsr
T5284 268-272 NCBITaxon:10088 denotes mice
T5285 319-322 UBERON:0000970 denotes eye
T5286 337-351 UBERON:0001707 denotes nasal cavities