Table 1 Dataset statistics. Dataset #Proteins #Networks #BPs #MFs #CCs Yeast 3904 44 1089 307 224 Human 13281 8 3413 681 438 Mouse 21603 10 4123 818 511 Fly 13562 38 1883 481 315 '#Proteins' represents the number of proteins in a dataset, '#Networks' means the number of functional association networks, '#BPs' denotes the number of BP labels, '#MFs' denotes the number of MF labels, and '#CCs' denotes the number of CC labels.