The average LD (r2) is shown as a function of the physical distance on autosomes. LD was estimated in Danes, Greenlanders without European admixture, and all Greenlanders (the full data set was used, and admixture was ignored). Additionally, LD in all Greenlanders (the full data set) was estimated with a method that takes admixture into account. This was done under the assumption of two ancestral populations, and the estimates correspond to estimates for the ancestral European population (EU component) and the ancestral Inuit population (Inuit component). Note that only 50 Danes were used for the estimate of LD for Danes, which is why the mean r2 is higher at greater distances for the Danes than for the European component of the Greenlandic population. For each subset of the data, a minor allele cutoff of 5% was used.