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PMC:3589482 / 6444-6606 JSONTXT

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bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T3545 161-162 . denotes .
T3544 160-161 -RRB- denotes )
T3543 155-160 NNP denotes Lonza
T3542 154-155 -LRB- denotes (
T3541 150-153 NNP denotes Kit
T3540 140-149 NNP denotes Detection
T3539 130-139 NNP denotes MycoAlert
T3538 126-129 DT denotes the
T3537 122-125 CC denotes and
T3536 120-121 -RRB- denotes )
T3535 115-120 NNP denotes Sigma
T3534 114-115 -LRB- denotes (
T3533 108-113 CD denotes 33258
T3532 102-107 VB denotes stain
T3531 94-101 NNP denotes Hoechst
T3530 88-93 VBG denotes using
T3529 79-87 NN denotes staining
T3528 71-78 JJ denotes nuclear
T3527 68-70 IN denotes by
T3526 58-67 NN denotes infection
T3525 47-57 NNP denotes Mycoplasma
T3524 39-46 VB denotes exclude
T3523 36-38 TO denotes to
T3522 28-35 VBN denotes checked
T3521 18-27 RB denotes routinely
T3520 13-17 VBD denotes were
T3519 4-12 NNS denotes cultures
T3518 0-3 DT denotes All
R2578 T3518 T3519 det All,cultures
R2579 T3519 T3522 nsubjpass cultures,checked
R2580 T3520 T3522 auxpass were,checked
R2581 T3521 T3522 advmod routinely,checked
R2582 T3522 T3522 ROOT checked,checked
R2583 T3523 T3524 aux to,exclude
R2584 T3524 T3522 xcomp exclude,checked
R2585 T3525 T3526 compound Mycoplasma,infection
R2586 T3526 T3524 dobj infection,exclude
R2587 T3527 T3526 prep by,infection
R2588 T3528 T3529 amod nuclear,staining
R2589 T3529 T3527 pobj staining,by
R2590 T3530 T3524 advcl using,exclude
R2591 T3531 T3532 nsubj Hoechst,stain
R2592 T3532 T3530 xcomp stain,using
R2593 T3533 T3535 nummod 33258,Sigma
R2594 T3534 T3535 punct (,Sigma
R2595 T3535 T3524 npadvmod Sigma,exclude
R2596 T3536 T3535 punct ),Sigma
R2597 T3537 T3535 cc and,Sigma
R2598 T3538 T3541 det the,Kit
R2599 T3539 T3541 compound MycoAlert,Kit
R2600 T3540 T3541 compound Detection,Kit
R2601 T3541 T3535 conj Kit,Sigma
R2602 T3542 T3541 punct (,Kit
R2603 T3543 T3541 appos Lonza,Kit
R2604 T3544 T3541 punct ),Kit
R2605 T3545 T3522 punct .,checked

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T3272 160-161 -RRB- denotes )
T3271 155-160 NN denotes Lonza
T3270 154-155 -LRB- denotes (
T3269 150-153 NN denotes Kit
T3268 140-149 NNP denotes Detection
T3267 130-139 NNP denotes MycoAlert
T3266 126-129 DT denotes the
T3265 122-125 CC denotes and
T3264 120-121 -RRB- denotes )
T3263 115-120 NN denotes Sigma
T3262 114-115 -LRB- denotes (
T3261 108-113 CD denotes 33258
T3260 102-107 NN denotes stain
T3259 94-101 NNP denotes Hoechst
T3258 88-93 VB denotes using
T3257 79-87 NN denotes staining
T3256 71-78 JJ denotes nuclear
T3255 68-70 IN denotes by
T3254 58-67 NN denotes infection
T3253 47-57 NN denotes Mycoplasma
T3252 39-46 VB denotes exclude
T3251 36-38 TO denotes to
T3250 28-35 VB denotes checked
T3249 18-27 RB denotes routinely
T3248 13-17 VB denotes were
T3247 4-12 NN denotes cultures
T3246 0-3 DT denotes All
R2334 T3247 T3246 arg1Of cultures,All
R2335 T3247 T3248 arg1Of cultures,were
R2336 T3247 T3250 arg2Of cultures,checked
R2337 T3250 T3248 arg2Of checked,were
R2338 T3250 T3249 arg1Of checked,routinely
R2339 T3250 T3251 modOf checked,to
R2340 T3252 T3251 arg1Of exclude,to
R2341 T3254 T3252 arg2Of infection,exclude
R2342 T3254 T3253 arg1Of infection,Mycoplasma
R2343 T3254 T3255 arg1Of infection,by
R2344 T3257 T3256 arg1Of staining,nuclear
R2345 T3257 T3258 arg1Of staining,using
R2346 T3257 T3265 arg1Of staining,and
R2347 T3260 T3258 arg2Of stain,using
R2348 T3260 T3259 arg1Of stain,Hoechst
R2349 T3260 T3261 arg1Of stain,33258
R2350 T3260 T3262 arg1Of stain,(
R2351 T3263 T3262 arg2Of Sigma,(
R2352 T3264 T3262 arg3Of ),(
R2353 T3265 T3255 arg2Of and,by
R2354 T3268 T3267 arg1Of Detection,MycoAlert
R2355 T3269 T3265 arg2Of Kit,and
R2356 T3269 T3266 arg1Of Kit,the
R2357 T3269 T3268 arg1Of Kit,Detection
R2358 T3269 T3270 arg1Of Kit,(
R2359 T3271 T3270 arg2Of Lonza,(
R2360 T3272 T3270 arg3Of ),(

sentences

Id Subject Object Predicate Lexical cue
T3164 0-162 Sentence denotes All cultures were routinely checked to exclude Mycoplasma infection by nuclear staining using Hoechst stain 33258 (Sigma) and the MycoAlert Detection Kit (Lonza).
T40 0-162 Sentence denotes All cultures were routinely checked to exclude Mycoplasma infection by nuclear staining using Hoechst stain 33258 (Sigma) and the MycoAlert Detection Kit (Lonza).

ICD10

Id Subject Object Predicate Lexical cue
T3171 47-67 http://purl.bioontology.org/ontology/ICD10/A49.3 denotes Mycoplasma infection

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T3314 39-87 Regulation denotes exclude Mycoplasma infection by nuclear staining
T3300 140-161 Protein denotes Detection Kit (Lonza)
T3296 115-120 Protein denotes Sigma