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PMC:3589482 / 44111-44225 JSONTXT

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bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T21759 113-114 . denotes .
T21758 101-113 NN denotes inflammation
T21757 98-100 IN denotes in
T21756 93-97 NN denotes role
T21755 82-92 JJ denotes functional
T21754 78-81 PRP$ denotes its
T21753 73-77 IN denotes with
T21752 62-72 JJ denotes consistent
T21751 59-61 VBZ denotes is
T21750 57-58 NN denotes β
T21749 56-57 : denotes -
T21748 51-56 NNP denotes C/EBP
T21747 48-50 IN denotes by
T21746 37-47 NN denotes expression
T21745 32-36 NN denotes gene
T21744 23-31 NNP denotes SerpinB2
T21743 20-22 IN denotes of
T21742 9-19 NN denotes regulation
T21741 5-8 DT denotes the
T21740 0-4 RB denotes Thus
R15546 T21755 T21756 amod functional,role
R15547 T21756 T21753 pobj role,with
R15549 T21757 T21756 prep in,role
R15551 T21758 T21757 pobj inflammation,in
R15552 T21759 T21751 punct .,is
R15741 T21740 T21751 advmod Thus,is
R15747 T21741 T21742 det the,regulation
R15751 T21742 T21751 nsubj regulation,is
R15755 T21743 T21742 prep of,regulation
R15756 T21744 T21746 compound SerpinB2,expression
R15759 T21745 T21746 compound gene,expression
R15762 T21746 T21743 pobj expression,of
R15767 T21747 T21742 prep by,regulation
R15769 T21748 T21747 pobj C/EBP,by
R15773 T21749 T21750 punct -,β
R15777 T21750 T21751 nsubj β,is
R15780 T21751 T21751 ROOT is,is
R15783 T21752 T21751 acomp consistent,is
R15787 T21753 T21752 prep with,consistent
R15791 T21754 T21756 poss its,role

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T19505 101-113 NN denotes inflammation
T19504 98-100 IN denotes in
T19503 93-97 NN denotes role
T19502 82-92 JJ denotes functional
T19501 78-81 PRP-DOLLAR- denotes its
T19500 73-77 IN denotes with
T19499 62-72 JJ denotes consistent
T19498 59-61 VB denotes is
T19497 51-58 NN denotes C/EBP-β
T19496 48-50 IN denotes by
T19495 37-47 NN denotes expression
T19494 32-36 NN denotes gene
T19493 23-31 NN denotes SerpinB2
T19492 20-22 IN denotes of
T19491 9-19 NN denotes regulation
T19490 5-8 DT denotes the
T19489 0-4 RB denotes Thus
R13973 T19491 T19490 arg1Of regulation,the
R13974 T19491 T19492 arg1Of regulation,of
R13975 T19491 T19496 arg1Of regulation,by
R13976 T19491 T19498 arg1Of regulation,is
R13977 T19491 T19499 arg1Of regulation,consistent
R13978 T19495 T19492 arg2Of expression,of
R13979 T19495 T19493 arg1Of expression,SerpinB2
R13980 T19495 T19494 arg1Of expression,gene
R13981 T19497 T19496 arg2Of C/EBP-β,by
R13982 T19498 T19489 arg1Of is,Thus
R13983 T19499 T19498 arg2Of consistent,is
R13984 T19499 T19500 arg1Of consistent,with
R13985 T19503 T19500 arg2Of role,with
R13986 T19503 T19501 arg1Of role,its
R13987 T19503 T19502 arg1Of role,functional
R13988 T19503 T19504 arg1Of role,in
R13989 T19505 T19504 arg2Of inflammation,in

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T18754 51-58 Protein denotes C/EBP-β
T18753 23-31 Protein denotes SerpinB2

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T20258 51-58 http://www.uniprot.org/uniprot/P28033 denotes C/EBP-β
T20227 23-31 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2

GO-BP

Id Subject Object Predicate Lexical cue
T18827 9-19 http://purl.obolibrary.org/obo/GO_0065007 denotes regulation
T18821 101-113 http://purl.obolibrary.org/obo/GO_0006954 denotes inflammation
T18815 32-47 http://purl.obolibrary.org/obo/GO_0010467 denotes gene expression

sentences

Id Subject Object Predicate Lexical cue
T18498 0-114 Sentence denotes Thus the regulation of SerpinB2 gene expression by C/EBP-β is consistent with its functional role in inflammation.
T263 0-114 Sentence denotes Thus the regulation of SerpinB2 gene expression by C/EBP-β is consistent with its functional role in inflammation.

simple1

Id Subject Object Predicate Lexical cue
T18891 51-58 Protein denotes C/EBP-β
T18890 23-31 Protein denotes SerpinB2

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T20174 37-47 Gene_expression denotes expression
T20173 9-19 Regulation denotes regulation
T20099 51-58 Protein denotes C/EBP-β
T20098 23-31 Protein denotes SerpinB2
R14539 T20098 T20174 themeOf SerpinB2,expression
R14540 T20099 T20173 causeOf C/EBP-β,regulation
R14598 T20174 T20173 themeOf expression,regulation

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T20549 51-58 Protein denotes C/EBP-β
T20548 23-31 Protein denotes SerpinB2
T20614 37-47 Gene_expression denotes expression
T20613 9-19 Regulation denotes regulation
R14754 T20548 T20614 themeOf SerpinB2,expression
R14755 T20549 T20613 causeOf C/EBP-β,regulation
R14788 T20614 T20613 themeOf expression,regulation

DLUT931

Id Subject Object Predicate Lexical cue
T20394 9-19 Regulation denotes regulation
T20393 37-47 Gene_expression denotes expression
T20323 51-58 Protein denotes C/EBP-β
T20322 23-31 Protein denotes SerpinB2
R14641 T20322 T20393 themeOf SerpinB2,expression
R14642 T20323 T20394 causeOf C/EBP-β,regulation
R14686 T20393 T20394 themeOf expression,regulation

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T21088 20-47 Gene_expression denotes of SerpinB2 gene expression
T21086 5-58 Regulation denotes the regulation of SerpinB2 gene expression by C/EBP-β
T21055 23-31 Protein denotes SerpinB2
T21013 48-58 Protein denotes by C/EBP-β
T21000 23-36 Protein denotes SerpinB2 gene
R14956 T21000 T21088 themeOf SerpinB2 gene,of SerpinB2 gene expression
R14961 T21013 T21086 causeOf by C/EBP-β,the regulation of SerpinB2 gene expression by C/EBP-β
R14973 T21088 T21086 themeOf of SerpinB2 gene expression,the regulation of SerpinB2 gene expression by C/EBP-β

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T20712 9-19 Regulation denotes regulation
T20711 37-47 Gene_expression denotes expression
T20710 51-58 Protein denotes C/EBP-β
T20709 23-36 Protein denotes SerpinB2 gene
R14835 T20709 T20711 themeOf SerpinB2 gene,expression
R14836 T20710 T20712 causeOf C/EBP-β,regulation
R14837 T20711 T20712 themeOf expression,regulation

testone

Id Subject Object Predicate Lexical cue
T18263 37-47 Gene_expression denotes expression
T18262 9-19 Regulation denotes regulation
T18202 51-58 Protein denotes C/EBP-β
T18201 23-31 Protein denotes SerpinB2
R13130 T18201 T18263 themeOf SerpinB2,expression
R13131 T18202 T18262 causeOf C/EBP-β,regulation
R13152 T18263 T18262 themeOf expression,regulation

test3

Id Subject Object Predicate Lexical cue
T18417 51-58 Protein denotes C/EBP-β
T18416 37-47 Gene_expression denotes expression
T18415 23-31 Protein denotes SerpinB2
T18414 9-19 Regulation denotes regulation
T18319 51-58 Protein denotes C/EBP-β
T18318 23-31 Protein denotes SerpinB2
R13193 T18415 T18416 themeOf SerpinB2,expression
R13194 T18416 T18414 themeOf expression,regulation
R13195 T18417 T18414 causeOf C/EBP-β,regulation