PMC:3589482 / 41657-41940 JSONTXT

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    bionlp-st-ge-2016-spacy-parsed

    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of the murine SerpinB2 proximal promoter sequence shows that a CRE and two AP-1-like elements, demonstrated to mediate PMA-stimulated transcription of the human SERPINB2 gene [37], also are present in the murine SerpinB2 proximal promoter between nucleotides −189 and −87."}

    pmc-enju-pas

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of the murine SerpinB2 proximal promoter sequence shows that a CRE and two AP-1-like elements, demonstrated to mediate PMA-stimulated transcription of the human SERPINB2 gene [37], also are present in the murine SerpinB2 proximal promoter between nucleotides −189 and −87."}

    bionlp-st-ge-2016-test-proteins

    {"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T18730","span":{"begin":223,"end":231},"obj":"Protein"},{"id":"T18729","span":{"begin":172,"end":180},"obj":"Protein"},{"id":"T18728","span":{"begin":25,"end":33},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"Inspection of the murine SerpinB2 proximal promoter sequence shows that a CRE and two AP-1-like elements, demonstrated to mediate PMA-stimulated transcription of the human SERPINB2 gene [37], also are present in the murine SerpinB2 proximal promoter between nucleotides −189 and −87."}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T20269","span":{"begin":86,"end":90},"obj":"http://www.uniprot.org/uniprot/P05412"},{"id":"T20242","span":{"begin":172,"end":180},"obj":"http://www.uniprot.org/uniprot/P05120"},{"id":"T20216","span":{"begin":223,"end":231},"obj":"http://www.uniprot.org/uniprot/P05120"},{"id":"T20215","span":{"begin":25,"end":33},"obj":"http://www.uniprot.org/uniprot/P05120"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"Inspection of the murine SerpinB2 proximal promoter sequence shows that a CRE and two AP-1-like elements, demonstrated to mediate PMA-stimulated transcription of the human SERPINB2 gene [37], also are present in the murine SerpinB2 proximal promoter between nucleotides −189 and −87."}

    GO-BP

    {"project":"GO-BP","denotations":[{"id":"T18800","span":{"begin":145,"end":158},"obj":"http://purl.obolibrary.org/obo/GO_0006351"}],"text":"Inspection of the murine SerpinB2 proximal promoter sequence shows that a CRE and two AP-1-like elements, demonstrated to mediate PMA-stimulated transcription of the human SERPINB2 gene [37], also are present in the murine SerpinB2 proximal promoter between nucleotides −189 and −87."}

    sentences

    {"project":"sentences","denotations":[{"id":"T18486","span":{"begin":0,"end":283},"obj":"Sentence"},{"id":"T251","span":{"begin":0,"end":283},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Inspection of the murine SerpinB2 proximal promoter sequence shows that a CRE and two AP-1-like elements, demonstrated to mediate PMA-stimulated transcription of the human SERPINB2 gene [37], also are present in the murine SerpinB2 proximal promoter between nucleotides −189 and −87."}

    simple1

    {"project":"simple1","denotations":[{"id":"T18867","span":{"begin":223,"end":231},"obj":"Protein"},{"id":"T18866","span":{"begin":172,"end":180},"obj":"Protein"},{"id":"T18865","span":{"begin":25,"end":33},"obj":"Protein"}],"text":"Inspection of the murine SerpinB2 proximal promoter sequence shows that a CRE and two AP-1-like elements, demonstrated to mediate PMA-stimulated transcription of the human SERPINB2 gene [37], also are present in the murine SerpinB2 proximal promoter between nucleotides −189 and −87."}

    BioNLP16_DUT

    {"project":"BioNLP16_DUT","denotations":[{"id":"T20075","span":{"begin":223,"end":231},"obj":"Protein"},{"id":"T20074","span":{"begin":172,"end":180},"obj":"Protein"},{"id":"T20073","span":{"begin":25,"end":33},"obj":"Protein"},{"id":"T20148","span":{"begin":201,"end":208},"obj":"Positive_regulation"},{"id":"T20147","span":{"begin":145,"end":158},"obj":"Transcription"},{"id":"T20146","span":{"begin":130,"end":144},"obj":"Positive_regulation"},{"id":"T20145","span":{"begin":122,"end":129},"obj":"Positive_regulation"}],"relations":[{"id":"R14513","pred":"themeOf","subj":"T20074","obj":"T20147"},{"id":"R14514","pred":"themeOf","subj":"T20075","obj":"T20148"},{"id":"R14578","pred":"themeOf","subj":"T20147","obj":"T20145"},{"id":"R14579","pred":"themeOf","subj":"T20147","obj":"T20146"}],"text":"Inspection of the murine SerpinB2 proximal promoter sequence shows that a CRE and two AP-1-like elements, demonstrated to mediate PMA-stimulated transcription of the human SERPINB2 gene [37], also are present in the murine SerpinB2 proximal promoter between nucleotides −189 and −87."}

    BioNLP16_Messiy

    {"project":"BioNLP16_Messiy","denotations":[{"id":"T20525","span":{"begin":223,"end":231},"obj":"Protein"},{"id":"T20524","span":{"begin":172,"end":180},"obj":"Protein"},{"id":"T20523","span":{"begin":25,"end":33},"obj":"Protein"},{"id":"T20592","span":{"begin":145,"end":158},"obj":"Transcription"}],"relations":[{"id":"R14735","pred":"themeOf","subj":"T20524","obj":"T20592"}],"text":"Inspection of the murine SerpinB2 proximal promoter sequence shows that a CRE and two AP-1-like elements, demonstrated to mediate PMA-stimulated transcription of the human SERPINB2 gene [37], also are present in the murine SerpinB2 proximal promoter between nucleotides −189 and −87."}

    DLUT931

    {"project":"DLUT931","denotations":[{"id":"T20371","span":{"begin":145,"end":158},"obj":"Transcription"},{"id":"T20299","span":{"begin":223,"end":231},"obj":"Protein"},{"id":"T20298","span":{"begin":172,"end":180},"obj":"Protein"},{"id":"T20297","span":{"begin":25,"end":33},"obj":"Protein"}],"relations":[{"id":"R14624","pred":"themeOf","subj":"T20298","obj":"T20371"}],"text":"Inspection of the murine SerpinB2 proximal promoter sequence shows that a CRE and two AP-1-like elements, demonstrated to mediate PMA-stimulated transcription of the human SERPINB2 gene [37], also are present in the murine SerpinB2 proximal promoter between nucleotides −189 and −87."}

    bionlp-st-ge-2016-test-ihmc

    {"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T21119","span":{"begin":130,"end":190},"obj":"Transcription"},{"id":"T21109","span":{"begin":130,"end":190},"obj":"Positive_regulation"},{"id":"T21076","span":{"begin":223,"end":231},"obj":"Protein"},{"id":"T21036","span":{"begin":74,"end":77},"obj":"Protein"},{"id":"T21034","span":{"begin":11,"end":33},"obj":"Protein"},{"id":"T21021","span":{"begin":258,"end":269},"obj":"Entity"},{"id":"T21020","span":{"begin":86,"end":190},"obj":"Protein"},{"id":"T20993","span":{"begin":130,"end":144},"obj":"Entity"},{"id":"T20989","span":{"begin":159,"end":190},"obj":"Protein"},{"id":"T20984","span":{"begin":43,"end":51},"obj":"Entity"},{"id":"T20958","span":{"begin":172,"end":180},"obj":"Protein"},{"id":"T20932","span":{"begin":212,"end":282},"obj":"Entity"}],"relations":[{"id":"R14952","pred":"themeOf","subj":"T20989","obj":"T21119"},{"id":"R14953","pred":"causeOf","subj":"T20993","obj":"T21109"},{"id":"R14982","pred":"themeOf","subj":"T21119","obj":"T21109"}],"text":"Inspection of the murine SerpinB2 proximal promoter sequence shows that a CRE and two AP-1-like elements, demonstrated to mediate PMA-stimulated transcription of the human SERPINB2 gene [37], also are present in the murine SerpinB2 proximal promoter between nucleotides −189 and −87."}

    bionlp-st-ge-2016-test-tees

    {"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T20667","span":{"begin":216,"end":249},"obj":"Protein"},{"id":"T20666","span":{"begin":86,"end":90},"obj":"Protein"},{"id":"T20665","span":{"begin":18,"end":60},"obj":"Protein"}],"text":"Inspection of the murine SerpinB2 proximal promoter sequence shows that a CRE and two AP-1-like elements, demonstrated to mediate PMA-stimulated transcription of the human SERPINB2 gene [37], also are present in the murine SerpinB2 proximal promoter between nucleotides −189 and −87."}

    testone

    {"project":"testone","denotations":[{"id":"T18243","span":{"begin":145,"end":158},"obj":"Transcription"},{"id":"T18242","span":{"begin":134,"end":144},"obj":"Positive_regulation"},{"id":"T18241","span":{"begin":122,"end":129},"obj":"Positive_regulation"},{"id":"T18178","span":{"begin":223,"end":231},"obj":"Protein"},{"id":"T18177","span":{"begin":172,"end":180},"obj":"Protein"},{"id":"T18176","span":{"begin":25,"end":33},"obj":"Protein"}],"relations":[{"id":"R13112","pred":"themeOf","subj":"T18177","obj":"T18243"},{"id":"R13144","pred":"themeOf","subj":"T18242","obj":"T18241"},{"id":"R13145","pred":"themeOf","subj":"T18243","obj":"T18242"},{"id":"R13146","pred":"themeOf","subj":"T18243","obj":"T18241"}],"text":"Inspection of the murine SerpinB2 proximal promoter sequence shows that a CRE and two AP-1-like elements, demonstrated to mediate PMA-stimulated transcription of the human SERPINB2 gene [37], also are present in the murine SerpinB2 proximal promoter between nucleotides −189 and −87."}

    test3

    {"project":"test3","denotations":[{"id":"T18376","span":{"begin":223,"end":231},"obj":"Protein"},{"id":"T18375","span":{"begin":172,"end":180},"obj":"Protein"},{"id":"T18374","span":{"begin":145,"end":158},"obj":"Transcription"},{"id":"T18373","span":{"begin":134,"end":144},"obj":"Positive_regulation"},{"id":"T18372","span":{"begin":25,"end":33},"obj":"Protein"},{"id":"T18295","span":{"begin":223,"end":231},"obj":"Protein"},{"id":"T18294","span":{"begin":172,"end":180},"obj":"Protein"},{"id":"T18293","span":{"begin":25,"end":33},"obj":"Protein"}],"relations":[{"id":"R13168","pred":"themeOf","subj":"T18374","obj":"T18373"},{"id":"R13169","pred":"themeOf","subj":"T18375","obj":"T18374"},{"id":"R13170","pred":"themeOf","subj":"T18376","obj":"T18374"}],"text":"Inspection of the murine SerpinB2 proximal promoter sequence shows that a CRE and two AP-1-like elements, demonstrated to mediate PMA-stimulated transcription of the human SERPINB2 gene [37], also are present in the murine SerpinB2 proximal promoter between nucleotides −189 and −87."}