PMC:3589482 / 35017-35151 JSONTXT

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    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T25778","span":{"begin":128,"end":133},"obj":"NN"},{"id":"T25779","span":{"begin":133,"end":134},"obj":"."},{"id":"T25777","span":{"begin":126,"end":127},"obj":"-RRB-"},{"id":"T25776","span":{"begin":122,"end":126},"obj":"NNP"},{"id":"T25775","span":{"begin":121,"end":122},"obj":"-LRB-"},{"id":"T25774","span":{"begin":101,"end":120},"obj":"NN"},{"id":"T25773","span":{"begin":91,"end":100},"obj":"NN"},{"id":"T25772","span":{"begin":88,"end":90},"obj":"IN"},{"id":"T25771","span":{"begin":77,"end":87},"obj":"VBN"},{"id":"T25770","span":{"begin":73,"end":76},"obj":"VBD"},{"id":"T25769","span":{"begin":68,"end":72},"obj":"NN"},{"id":"T25768","span":{"begin":65,"end":67},"obj":"IN"},{"id":"T25767","span":{"begin":56,"end":64},"obj":"NN"},{"id":"T25766","span":{"begin":47,"end":55},"obj":"JJ"},{"id":"T25765","span":{"begin":38,"end":46},"obj":"NNP"},{"id":"T25764","span":{"begin":34,"end":37},"obj":"DT"},{"id":"T25763","span":{"begin":31,"end":33},"obj":"IN"},{"id":"T25762","span":{"begin":21,"end":30},"obj":"NN"},{"id":"T25761","span":{"begin":14,"end":20},"obj":"NN"},{"id":"T25760","span":{"begin":0,"end":13},"obj":"NNP"}],"relations":[{"id":"R18359","pred":"compound","subj":"T25760","obj":"T25761"},{"id":"R18360","pred":"compound","subj":"T25761","obj":"T25762"},{"id":"R18361","pred":"nsubjpass","subj":"T25762","obj":"T25771"},{"id":"R18362","pred":"prep","subj":"T25763","obj":"T25762"},{"id":"R18363","pred":"det","subj":"T25764","obj":"T25767"},{"id":"R18364","pred":"nmod","subj":"T25765","obj":"T25767"},{"id":"R18365","pred":"amod","subj":"T25766","obj":"T25767"},{"id":"R18366","pred":"pobj","subj":"T25767","obj":"T25763"},{"id":"R18367","pred":"prep","subj":"T25768","obj":"T25767"},{"id":"R18368","pred":"pobj","subj":"T25769","obj":"T25768"},{"id":"R18369","pred":"auxpass","subj":"T25770","obj":"T25771"},{"id":"R18370","pred":"ROOT","subj":"T25771","obj":"T25771"},{"id":"R18371","pred":"agent","subj":"T25772","obj":"T25771"},{"id":"R18372","pred":"compound","subj":"T25773","obj":"T25774"},{"id":"R18373","pred":"pobj","subj":"T25774","obj":"T25772"},{"id":"R18374","pred":"punct","subj":"T25775","obj":"T25776"},{"id":"R18375","pred":"appos","subj":"T25776","obj":"T25774"},{"id":"R18376","pred":"punct","subj":"T25777","obj":"T25776"},{"id":"R18377","pred":"conj","subj":"T25778","obj":"T25774"},{"id":"R18378","pred":"punct","subj":"T25779","obj":"T25771"}],"text":"Transcription factor occupancy on the SerpinB2 proximal promoter in vivo was determined by chromatin immunoprecipitation (ChIP) assay."}

    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T25426","span":{"begin":128,"end":133},"obj":"NN"},{"id":"T25425","span":{"begin":126,"end":127},"obj":"-RRB-"},{"id":"T25424","span":{"begin":122,"end":126},"obj":"NN"},{"id":"T25423","span":{"begin":121,"end":122},"obj":"-LRB-"},{"id":"T25422","span":{"begin":101,"end":120},"obj":"NN"},{"id":"T25421","span":{"begin":91,"end":100},"obj":"NN"},{"id":"T25420","span":{"begin":88,"end":90},"obj":"IN"},{"id":"T25419","span":{"begin":77,"end":87},"obj":"VB"},{"id":"T25418","span":{"begin":73,"end":76},"obj":"VB"},{"id":"T25417","span":{"begin":68,"end":72},"obj":"FW"},{"id":"T25416","span":{"begin":65,"end":67},"obj":"FW"},{"id":"T25415","span":{"begin":56,"end":64},"obj":"NN"},{"id":"T25414","span":{"begin":47,"end":55},"obj":"JJ"},{"id":"T25410","span":{"begin":21,"end":30},"obj":"NN"},{"id":"T25409","span":{"begin":14,"end":20},"obj":"NN"},{"id":"T25408","span":{"begin":0,"end":13},"obj":"NN"},{"id":"T25413","span":{"begin":38,"end":46},"obj":"NN"},{"id":"T25412","span":{"begin":34,"end":37},"obj":"DT"},{"id":"T25411","span":{"begin":31,"end":33},"obj":"IN"}],"relations":[{"id":"R18149","pred":"arg1Of","subj":"T25410","obj":"T25408"},{"id":"R18150","pred":"arg1Of","subj":"T25410","obj":"T25409"},{"id":"R18151","pred":"arg1Of","subj":"T25410","obj":"T25411"},{"id":"R18152","pred":"arg1Of","subj":"T25410","obj":"T25418"},{"id":"R18153","pred":"arg2Of","subj":"T25410","obj":"T25419"},{"id":"R18154","pred":"arg2Of","subj":"T25415","obj":"T25411"},{"id":"R18155","pred":"arg1Of","subj":"T25415","obj":"T25412"},{"id":"R18156","pred":"arg1Of","subj":"T25415","obj":"T25413"},{"id":"R18157","pred":"arg1Of","subj":"T25415","obj":"T25414"},{"id":"R18158","pred":"arg1Of","subj":"T25415","obj":"T25417"},{"id":"R18159","pred":"arg1Of","subj":"T25417","obj":"T25416"},{"id":"R18160","pred":"arg2Of","subj":"T25419","obj":"T25418"},{"id":"R18161","pred":"arg1Of","subj":"T25422","obj":"T25421"},{"id":"R18162","pred":"arg1Of","subj":"T25422","obj":"T25423"},{"id":"R18163","pred":"arg2Of","subj":"T25424","obj":"T25423"},{"id":"R18164","pred":"arg3Of","subj":"T25425","obj":"T25423"},{"id":"R18165","pred":"arg1Of","subj":"T25426","obj":"T25419"},{"id":"R18166","pred":"arg2Of","subj":"T25426","obj":"T25420"},{"id":"R18167","pred":"arg1Of","subj":"T25426","obj":"T25422"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"Transcription factor occupancy on the SerpinB2 proximal promoter in vivo was determined by chromatin immunoprecipitation (ChIP) assay."}

    bionlp-st-ge-2016-test-proteins

    {"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T25351","span":{"begin":38,"end":46},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"Transcription factor occupancy on the SerpinB2 proximal promoter in vivo was determined by chromatin immunoprecipitation (ChIP) assay."}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T25613","span":{"begin":38,"end":46},"obj":"http://www.uniprot.org/uniprot/P05120"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"Transcription factor occupancy on the SerpinB2 proximal promoter in vivo was determined by chromatin immunoprecipitation (ChIP) assay."}

    GO-BP

    {"project":"GO-BP","denotations":[{"id":"T25361","span":{"begin":0,"end":13},"obj":"http://purl.obolibrary.org/obo/GO_0006351"}],"text":"Transcription factor occupancy on the SerpinB2 proximal promoter in vivo was determined by chromatin immunoprecipitation (ChIP) assay."}

    GO-CC

    {"project":"GO-CC","denotations":[{"id":"T25372","span":{"begin":91,"end":100},"obj":"http://purl.obolibrary.org/obo/GO_0000785"}],"text":"Transcription factor occupancy on the SerpinB2 proximal promoter in vivo was determined by chromatin immunoprecipitation (ChIP) assay."}

    sentences

    {"project":"sentences","denotations":[{"id":"T25323","span":{"begin":0,"end":134},"obj":"Sentence"},{"id":"T213","span":{"begin":0,"end":134},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Transcription factor occupancy on the SerpinB2 proximal promoter in vivo was determined by chromatin immunoprecipitation (ChIP) assay."}

    simple1

    {"project":"simple1","denotations":[{"id":"T25385","span":{"begin":38,"end":46},"obj":"Protein"}],"text":"Transcription factor occupancy on the SerpinB2 proximal promoter in vivo was determined by chromatin immunoprecipitation (ChIP) assay."}

    BioNLP16_DUT

    {"project":"BioNLP16_DUT","denotations":[{"id":"T25603","span":{"begin":21,"end":30},"obj":"Binding"},{"id":"T25592","span":{"begin":38,"end":46},"obj":"Protein"}],"relations":[{"id":"R18322","pred":"themeOf","subj":"T25592","obj":"T25603"}],"text":"Transcription factor occupancy on the SerpinB2 proximal promoter in vivo was determined by chromatin immunoprecipitation (ChIP) assay."}

    BioNLP16_Messiy

    {"project":"BioNLP16_Messiy","denotations":[{"id":"T25658","span":{"begin":21,"end":30},"obj":"Binding"},{"id":"T25647","span":{"begin":38,"end":46},"obj":"Protein"}],"relations":[{"id":"R18332","pred":"themeOf","subj":"T25647","obj":"T25658"}],"text":"Transcription factor occupancy on the SerpinB2 proximal promoter in vivo was determined by chromatin immunoprecipitation (ChIP) assay."}

    DLUT931

    {"project":"DLUT931","denotations":[{"id":"T25618","span":{"begin":38,"end":46},"obj":"Protein"}],"text":"Transcription factor occupancy on the SerpinB2 proximal promoter in vivo was determined by chromatin immunoprecipitation (ChIP) assay."}

    bionlp-st-ge-2016-test-ihmc

    {"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T25717","span":{"begin":91,"end":100},"obj":"Entity"},{"id":"T25714","span":{"begin":56,"end":72},"obj":"Entity"},{"id":"T25709","span":{"begin":34,"end":55},"obj":"Protein"}],"text":"Transcription factor occupancy on the SerpinB2 proximal promoter in vivo was determined by chromatin immunoprecipitation (ChIP) assay."}

    bionlp-st-ge-2016-test-tees

    {"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T25663","span":{"begin":38,"end":64},"obj":"Protein"}],"text":"Transcription factor occupancy on the SerpinB2 proximal promoter in vivo was determined by chromatin immunoprecipitation (ChIP) assay."}

    testone

    {"project":"testone","denotations":[{"id":"T25290","span":{"begin":56,"end":64},"obj":"Entity"},{"id":"T25278","span":{"begin":38,"end":46},"obj":"Protein"}],"relations":[{"id":"R18122","pred":"partOf","subj":"T25290","obj":"T25278"}],"text":"Transcription factor occupancy on the SerpinB2 proximal promoter in vivo was determined by chromatin immunoprecipitation (ChIP) assay."}

    test3

    {"project":"test3","denotations":[{"id":"T25310","span":{"begin":38,"end":46},"obj":"Protein"},{"id":"T25309","span":{"begin":21,"end":30},"obj":"Binding"},{"id":"T25296","span":{"begin":38,"end":46},"obj":"Protein"}],"text":"Transcription factor occupancy on the SerpinB2 proximal promoter in vivo was determined by chromatin immunoprecipitation (ChIP) assay."}