PMC:3589482 / 34649-34879 JSONTXT

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    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T15631","span":{"begin":229,"end":230},"obj":"."},{"id":"T15630","span":{"begin":226,"end":229},"obj":"NNP"},{"id":"T15629","span":{"begin":223,"end":225},"obj":"TO"},{"id":"T15628","span":{"begin":214,"end":222},"obj":"NN"},{"id":"T15627","span":{"begin":211,"end":213},"obj":"IN"},{"id":"T15626","span":{"begin":202,"end":210},"obj":"NN"},{"id":"T15625","span":{"begin":193,"end":201},"obj":"NNP"},{"id":"T15624","span":{"begin":189,"end":192},"obj":"DT"},{"id":"T15623","span":{"begin":184,"end":188},"obj":"IN"},{"id":"T15622","span":{"begin":170,"end":183},"obj":"NN"},{"id":"T15621","span":{"begin":160,"end":169},"obj":"VBN"},{"id":"T15620","span":{"begin":156,"end":159},"obj":"IN"},{"id":"T15619","span":{"begin":144,"end":155},"obj":"JJ"},{"id":"T15618","span":{"begin":141,"end":143},"obj":"VB"},{"id":"T15617","span":{"begin":137,"end":140},"obj":"RB"},{"id":"T15616","span":{"begin":133,"end":136},"obj":"MD"},{"id":"T15615","span":{"begin":131,"end":132},"obj":"NN"},{"id":"T15614","span":{"begin":130,"end":131},"obj":":"},{"id":"T15613","span":{"begin":125,"end":130},"obj":"NNP"},{"id":"T15612","span":{"begin":105,"end":124},"obj":"JJ"},{"id":"T15611","span":{"begin":100,"end":104},"obj":"IN"},{"id":"T15610","span":{"begin":91,"end":99},"obj":"VBP"},{"id":"T15609","span":{"begin":87,"end":90},"obj":"CC"},{"id":"T15608","span":{"begin":85,"end":86},"obj":","},{"id":"T15607","span":{"begin":74,"end":85},"obj":"NN"},{"id":"T15606","span":{"begin":68,"end":73},"obj":"NNP"},{"id":"T15605","span":{"begin":67,"end":68},"obj":":"},{"id":"T15604","span":{"begin":60,"end":67},"obj":"NN"},{"id":"T15603","span":{"begin":56,"end":59},"obj":"CC"},{"id":"T15602","span":{"begin":54,"end":55},"obj":"NN"},{"id":"T15601","span":{"begin":53,"end":54},"obj":":"},{"id":"T15600","span":{"begin":48,"end":53},"obj":"NNP"},{"id":"T15599","span":{"begin":40,"end":47},"obj":"IN"},{"id":"T15598","span":{"begin":27,"end":39},"obj":"NN"},{"id":"T15597","span":{"begin":19,"end":26},"obj":"JJ"},{"id":"T15596","span":{"begin":16,"end":18},"obj":"DT"},{"id":"T15595","span":{"begin":11,"end":15},"obj":"VBP"},{"id":"T15594","span":{"begin":6,"end":10},"obj":"NNS"},{"id":"T15593","span":{"begin":0,"end":5},"obj":"DT"}],"relations":[{"id":"R11541","pred":"det","subj":"T15593","obj":"T15594"},{"id":"R11542","pred":"nsubj","subj":"T15594","obj":"T15595"},{"id":"R11543","pred":"ROOT","subj":"T15595","obj":"T15595"},{"id":"R11544","pred":"det","subj":"T15596","obj":"T15598"},{"id":"R11545","pred":"compound","subj":"T15597","obj":"T15598"},{"id":"R11546","pred":"dobj","subj":"T15598","obj":"T15595"},{"id":"R11547","pred":"prep","subj":"T15599","obj":"T15598"},{"id":"R11548","pred":"pobj","subj":"T15600","obj":"T15599"},{"id":"R11549","pred":"punct","subj":"T15601","obj":"T15602"},{"id":"R11550","pred":"appos","subj":"T15602","obj":"T15598"},{"id":"R11551","pred":"cc","subj":"T15603","obj":"T15602"},{"id":"R11552","pred":"conj","subj":"T15604","obj":"T15602"},{"id":"R11553","pred":"punct","subj":"T15605","obj":"T15607"},{"id":"R11554","pred":"compound","subj":"T15606","obj":"T15607"},{"id":"R11555","pred":"conj","subj":"T15607","obj":"T15598"},{"id":"R11556","pred":"punct","subj":"T15608","obj":"T15607"},{"id":"R11557","pred":"cc","subj":"T15609","obj":"T15607"},{"id":"R11558","pred":"advcl","subj":"T15610","obj":"T15595"},{"id":"R11559","pred":"mark","subj":"T15611","obj":"T15618"},{"id":"R11560","pred":"amod","subj":"T15612","obj":"T15615"},{"id":"R11561","pred":"compound","subj":"T15613","obj":"T15615"},{"id":"R11562","pred":"punct","subj":"T15614","obj":"T15615"},{"id":"R11563","pred":"nsubj","subj":"T15615","obj":"T15618"},{"id":"R11564","pred":"aux","subj":"T15616","obj":"T15618"},{"id":"R11565","pred":"neg","subj":"T15617","obj":"T15618"},{"id":"R11566","pred":"ccomp","subj":"T15618","obj":"T15610"},{"id":"R11567","pred":"acomp","subj":"T15619","obj":"T15618"},{"id":"R11568","pred":"prep","subj":"T15620","obj":"T15619"},{"id":"R11569","pred":"amod","subj":"T15621","obj":"T15622"},{"id":"R11570","pred":"pobj","subj":"T15622","obj":"T15620"},{"id":"R11571","pred":"prep","subj":"T15623","obj":"T15622"},{"id":"R11572","pred":"det","subj":"T15624","obj":"T15626"},{"id":"R11573","pred":"compound","subj":"T15625","obj":"T15626"},{"id":"R11574","pred":"pobj","subj":"T15626","obj":"T15623"},{"id":"R11575","pred":"prep","subj":"T15627","obj":"T15618"},{"id":"R11576","pred":"pobj","subj":"T15628","obj":"T15627"},{"id":"R11577","pred":"prep","subj":"T15629","obj":"T15628"},{"id":"R11578","pred":"pobj","subj":"T15630","obj":"T15629"},{"id":"R11579","pred":"punct","subj":"T15631","obj":"T15595"}],"text":"These data show an inverse relationship between C/EBP-β and p-C/EBP-βT217 recruitment, and indicate that T217-phosphorylated C/EBP-β may not be responsible for increased transcription from the SerpinB2 promoter in response to LPS."}

    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T15137","span":{"begin":226,"end":229},"obj":"NN"},{"id":"T15136","span":{"begin":223,"end":225},"obj":"TO"},{"id":"T15135","span":{"begin":214,"end":222},"obj":"NN"},{"id":"T15134","span":{"begin":211,"end":213},"obj":"IN"},{"id":"T15133","span":{"begin":202,"end":210},"obj":"NN"},{"id":"T15132","span":{"begin":193,"end":201},"obj":"NN"},{"id":"T15131","span":{"begin":189,"end":192},"obj":"DT"},{"id":"T15130","span":{"begin":184,"end":188},"obj":"IN"},{"id":"T15129","span":{"begin":170,"end":183},"obj":"NN"},{"id":"T15128","span":{"begin":160,"end":169},"obj":"VB"},{"id":"T15127","span":{"begin":156,"end":159},"obj":"IN"},{"id":"T15126","span":{"begin":144,"end":155},"obj":"JJ"},{"id":"T15125","span":{"begin":141,"end":143},"obj":"VB"},{"id":"T15124","span":{"begin":137,"end":140},"obj":"RB"},{"id":"T15123","span":{"begin":133,"end":136},"obj":"MD"},{"id":"T15122","span":{"begin":125,"end":132},"obj":"NN"},{"id":"T15121","span":{"begin":105,"end":124},"obj":"JJ"},{"id":"T15120","span":{"begin":100,"end":104},"obj":"IN"},{"id":"T15119","span":{"begin":91,"end":99},"obj":"VB"},{"id":"T15118","span":{"begin":87,"end":90},"obj":"CC"},{"id":"T15117","span":{"begin":85,"end":86},"obj":"-COMMA-"},{"id":"T15116","span":{"begin":74,"end":85},"obj":"NN"},{"id":"T15115","span":{"begin":60,"end":73},"obj":"NN"},{"id":"T15114","span":{"begin":56,"end":59},"obj":"CC"},{"id":"T15113","span":{"begin":48,"end":55},"obj":"NN"},{"id":"T15112","span":{"begin":40,"end":47},"obj":"IN"},{"id":"T15111","span":{"begin":27,"end":39},"obj":"NN"},{"id":"T15110","span":{"begin":19,"end":26},"obj":"JJ"},{"id":"T15109","span":{"begin":16,"end":18},"obj":"DT"},{"id":"T15108","span":{"begin":11,"end":15},"obj":"VB"},{"id":"T15107","span":{"begin":6,"end":10},"obj":"NN"},{"id":"T15106","span":{"begin":0,"end":5},"obj":"DT"}],"relations":[{"id":"R11143","pred":"arg1Of","subj":"T15107","obj":"T15106"},{"id":"R11144","pred":"arg1Of","subj":"T15107","obj":"T15108"},{"id":"R11145","pred":"arg1Of","subj":"T15107","obj":"T15119"},{"id":"R11146","pred":"arg1Of","subj":"T15108","obj":"T15118"},{"id":"R11147","pred":"arg2Of","subj":"T15111","obj":"T15108"},{"id":"R11148","pred":"arg1Of","subj":"T15111","obj":"T15109"},{"id":"R11149","pred":"arg1Of","subj":"T15111","obj":"T15110"},{"id":"R11150","pred":"arg1Of","subj":"T15111","obj":"T15112"},{"id":"R11151","pred":"arg1Of","subj":"T15113","obj":"T15114"},{"id":"R11152","pred":"arg2Of","subj":"T15114","obj":"T15112"},{"id":"R11153","pred":"arg2Of","subj":"T15116","obj":"T15114"},{"id":"R11154","pred":"arg1Of","subj":"T15116","obj":"T15115"},{"id":"R11155","pred":"arg1Of","subj":"T15118","obj":"T15117"},{"id":"R11156","pred":"arg2Of","subj":"T15119","obj":"T15118"},{"id":"R11157","pred":"arg1Of","subj":"T15122","obj":"T15121"},{"id":"R11158","pred":"arg1Of","subj":"T15122","obj":"T15123"},{"id":"R11159","pred":"arg1Of","subj":"T15122","obj":"T15125"},{"id":"R11160","pred":"arg1Of","subj":"T15122","obj":"T15126"},{"id":"R11161","pred":"arg2Of","subj":"T15125","obj":"T15119"},{"id":"R11162","pred":"arg1Of","subj":"T15125","obj":"T15120"},{"id":"R11163","pred":"arg2Of","subj":"T15125","obj":"T15123"},{"id":"R11164","pred":"arg1Of","subj":"T15125","obj":"T15124"},{"id":"R11165","pred":"arg2Of","subj":"T15126","obj":"T15125"},{"id":"R11166","pred":"arg1Of","subj":"T15126","obj":"T15127"},{"id":"R11167","pred":"arg2Of","subj":"T15129","obj":"T15127"},{"id":"R11168","pred":"arg2Of","subj":"T15129","obj":"T15128"},{"id":"R11169","pred":"arg1Of","subj":"T15129","obj":"T15130"},{"id":"R11170","pred":"arg1Of","subj":"T15129","obj":"T15134"},{"id":"R11171","pred":"arg2Of","subj":"T15133","obj":"T15130"},{"id":"R11172","pred":"arg1Of","subj":"T15133","obj":"T15131"},{"id":"R11173","pred":"arg1Of","subj":"T15133","obj":"T15132"},{"id":"R11174","pred":"arg1Of","subj":"T15134","obj":"T15136"},{"id":"R11175","pred":"arg2Of","subj":"T15135","obj":"T15134"},{"id":"R11176","pred":"arg3Of","subj":"T15137","obj":"T15134"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"These data show an inverse relationship between C/EBP-β and p-C/EBP-βT217 recruitment, and indicate that T217-phosphorylated C/EBP-β may not be responsible for increased transcription from the SerpinB2 promoter in response to LPS."}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T15192","span":{"begin":193,"end":201},"obj":"http://www.uniprot.org/uniprot/P05120"},{"id":"T15184","span":{"begin":125,"end":132},"obj":"http://www.uniprot.org/uniprot/P28033"},{"id":"T15183","span":{"begin":48,"end":55},"obj":"http://www.uniprot.org/uniprot/P28033"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"These data show an inverse relationship between C/EBP-β and p-C/EBP-βT217 recruitment, and indicate that T217-phosphorylated C/EBP-β may not be responsible for increased transcription from the SerpinB2 promoter in response to LPS."}

    GO-BP

    {"project":"GO-BP","denotations":[{"id":"T14854","span":{"begin":170,"end":183},"obj":"http://purl.obolibrary.org/obo/GO_0006351"},{"id":"T14851","span":{"begin":214,"end":229},"obj":"http://purl.obolibrary.org/obo/GO_0032496"}],"text":"These data show an inverse relationship between C/EBP-β and p-C/EBP-βT217 recruitment, and indicate that T217-phosphorylated C/EBP-β may not be responsible for increased transcription from the SerpinB2 promoter in response to LPS."}

    sentences

    {"project":"sentences","denotations":[{"id":"T14846","span":{"begin":0,"end":230},"obj":"Sentence"},{"id":"T211","span":{"begin":0,"end":230},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"These data show an inverse relationship between C/EBP-β and p-C/EBP-βT217 recruitment, and indicate that T217-phosphorylated C/EBP-β may not be responsible for increased transcription from the SerpinB2 promoter in response to LPS."}

    BioNLP16_DUT

    {"project":"BioNLP16_DUT","denotations":[{"id":"T15176","span":{"begin":74,"end":85},"obj":"Binding"},{"id":"T15175","span":{"begin":144,"end":155},"obj":"Regulation"},{"id":"T15174","span":{"begin":105,"end":124},"obj":"Phosphorylation"},{"id":"T15173","span":{"begin":170,"end":183},"obj":"Transcription"},{"id":"T15172","span":{"begin":160,"end":169},"obj":"Positive_regulation"},{"id":"T15158","span":{"begin":193,"end":201},"obj":"Protein"},{"id":"T15157","span":{"begin":125,"end":132},"obj":"Protein"},{"id":"T15156","span":{"begin":60,"end":73},"obj":"Protein"},{"id":"T15155","span":{"begin":48,"end":55},"obj":"Protein"}],"relations":[{"id":"R11201","pred":"themeOf","subj":"T15155","obj":"T15176"},{"id":"R11202","pred":"themeOf","subj":"T15156","obj":"T15176"},{"id":"R11203","pred":"themeOf","subj":"T15157","obj":"T15174"},{"id":"R11204","pred":"themeOf","subj":"T15157","obj":"T15175"},{"id":"R11205","pred":"themeOf","subj":"T15158","obj":"T15172"},{"id":"R11206","pred":"themeOf","subj":"T15158","obj":"T15173"},{"id":"R11207","pred":"themeOf","subj":"T15173","obj":"T15172"}],"text":"These data show an inverse relationship between C/EBP-β and p-C/EBP-βT217 recruitment, and indicate that T217-phosphorylated C/EBP-β may not be responsible for increased transcription from the SerpinB2 promoter in response to LPS."}

    BioNLP16_Messiy

    {"project":"BioNLP16_Messiy","denotations":[{"id":"T15268","span":{"begin":74,"end":85},"obj":"Binding"},{"id":"T15267","span":{"begin":105,"end":124},"obj":"Phosphorylation"},{"id":"T15266","span":{"begin":144,"end":155},"obj":"Regulation"},{"id":"T15254","span":{"begin":193,"end":201},"obj":"Protein"},{"id":"T15253","span":{"begin":125,"end":132},"obj":"Protein"},{"id":"T15252","span":{"begin":60,"end":73},"obj":"Protein"},{"id":"T15251","span":{"begin":48,"end":55},"obj":"Protein"}],"relations":[{"id":"R11255","pred":"themeOf","subj":"T15251","obj":"T15268"},{"id":"R11256","pred":"themeOf","subj":"T15252","obj":"T15268"},{"id":"R11257","pred":"themeOf","subj":"T15253","obj":"T15267"},{"id":"R11258","pred":"themeOf","subj":"T15253","obj":"T15266"}],"text":"These data show an inverse relationship between C/EBP-β and p-C/EBP-βT217 recruitment, and indicate that T217-phosphorylated C/EBP-β may not be responsible for increased transcription from the SerpinB2 promoter in response to LPS."}

    DLUT931

    {"project":"DLUT931","denotations":[{"id":"T15233","span":{"begin":160,"end":169},"obj":"Positive_regulation"},{"id":"T15232","span":{"begin":144,"end":155},"obj":"Positive_regulation"},{"id":"T15231","span":{"begin":170,"end":183},"obj":"Transcription"},{"id":"T15230","span":{"begin":105,"end":124},"obj":"Phosphorylation"},{"id":"T15229","span":{"begin":74,"end":85},"obj":"Binding"},{"id":"T15217","span":{"begin":193,"end":201},"obj":"Protein"},{"id":"T15216","span":{"begin":125,"end":132},"obj":"Protein"},{"id":"T15215","span":{"begin":60,"end":73},"obj":"Protein"},{"id":"T15214","span":{"begin":48,"end":55},"obj":"Protein"}],"relations":[{"id":"R11229","pred":"themeOf","subj":"T15214","obj":"T15229"},{"id":"R11230","pred":"themeOf","subj":"T15215","obj":"T15229"},{"id":"R11231","pred":"themeOf","subj":"T15216","obj":"T15230"},{"id":"R11232","pred":"causeOf","subj":"T15216","obj":"T15232"},{"id":"R11233","pred":"themeOf","subj":"T15217","obj":"T15231"},{"id":"R11237","pred":"themeOf","subj":"T15231","obj":"T15232"},{"id":"R11238","pred":"themeOf","subj":"T15231","obj":"T15233"}],"text":"These data show an inverse relationship between C/EBP-β and p-C/EBP-βT217 recruitment, and indicate that T217-phosphorylated C/EBP-β may not be responsible for increased transcription from the SerpinB2 promoter in response to LPS."}

    bionlp-st-ge-2016-test-ihmc

    {"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T15328","span":{"begin":105,"end":132},"obj":"Phosphorylation"},{"id":"T15322","span":{"begin":60,"end":85},"obj":"Binding"},{"id":"T15315","span":{"begin":105,"end":124},"obj":"Entity"},{"id":"T15308","span":{"begin":48,"end":55},"obj":"Protein"},{"id":"T15297","span":{"begin":193,"end":201},"obj":"Protein"},{"id":"T15293","span":{"begin":189,"end":210},"obj":"Entity"},{"id":"T15277","span":{"begin":60,"end":73},"obj":"Protein"},{"id":"T15271","span":{"begin":105,"end":132},"obj":"Protein"}],"relations":[{"id":"R11261","pred":"themeOf","subj":"T15271","obj":"T15328"},{"id":"R11263","pred":"themeOf","subj":"T15277","obj":"T15322"},{"id":"R11265","pred":"partOf","subj":"T15293","obj":"T15297"},{"id":"R11275","pred":"partOf","subj":"T15315","obj":"T15271"},{"id":"R11276","pred":"siteOf","subj":"T15315","obj":"T15328"}],"text":"These data show an inverse relationship between C/EBP-β and p-C/EBP-βT217 recruitment, and indicate that T217-phosphorylated C/EBP-β may not be responsible for increased transcription from the SerpinB2 promoter in response to LPS."}

    testone

    {"project":"testone","denotations":[{"id":"T14821","span":{"begin":170,"end":183},"obj":"Transcription"},{"id":"T14820","span":{"begin":160,"end":169},"obj":"Positive_regulation"},{"id":"T14819","span":{"begin":110,"end":124},"obj":"Phosphorylation"},{"id":"T14818","span":{"begin":74,"end":85},"obj":"Binding"}],"relations":[{"id":"R10896","pred":"themeOf","subj":"T14821","obj":"T14820"}],"text":"These data show an inverse relationship between C/EBP-β and p-C/EBP-βT217 recruitment, and indicate that T217-phosphorylated C/EBP-β may not be responsible for increased transcription from the SerpinB2 promoter in response to LPS."}

    test3

    {"project":"test3","denotations":[{"id":"T14838","span":{"begin":170,"end":183},"obj":"Transcription"},{"id":"T14837","span":{"begin":160,"end":169},"obj":"Positive_regulation"},{"id":"T14836","span":{"begin":144,"end":155},"obj":"Positive_regulation"},{"id":"T14835","span":{"begin":110,"end":124},"obj":"Phosphorylation"},{"id":"T14834","span":{"begin":74,"end":85},"obj":"Binding"}],"relations":[{"id":"R10900","pred":"themeOf","subj":"T14837","obj":"T14836"},{"id":"R10901","pred":"themeOf","subj":"T14838","obj":"T14837"}],"text":"These data show an inverse relationship between C/EBP-β and p-C/EBP-βT217 recruitment, and indicate that T217-phosphorylated C/EBP-β may not be responsible for increased transcription from the SerpinB2 promoter in response to LPS."}