PMC:3589482 / 32011-32134 JSONTXT

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    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T25049","span":{"begin":122,"end":123},"obj":"."},{"id":"T25048","span":{"begin":112,"end":122},"obj":"NN"},{"id":"T25047","span":{"begin":107,"end":111},"obj":"NNP"},{"id":"T25046","span":{"begin":98,"end":106},"obj":"NNP"},{"id":"T25045","span":{"begin":86,"end":97},"obj":"JJ"},{"id":"T25044","span":{"begin":82,"end":85},"obj":"CC"},{"id":"T25043","span":{"begin":69,"end":81},"obj":"JJ"},{"id":"T25042","span":{"begin":65,"end":68},"obj":"IN"},{"id":"T25041","span":{"begin":55,"end":64},"obj":"JJ"},{"id":"T25040","span":{"begin":52,"end":54},"obj":"VBZ"},{"id":"T25039","span":{"begin":50,"end":51},"obj":"NN"},{"id":"T25038","span":{"begin":49,"end":50},"obj":":"},{"id":"T25037","span":{"begin":44,"end":49},"obj":"SYM"}],"relations":[{"id":"R17904","pred":"dep","subj":"T25037","obj":"T25040"},{"id":"R17905","pred":"punct","subj":"T25038","obj":"T25040"},{"id":"R17906","pred":"nsubj","subj":"T25039","obj":"T25040"},{"id":"R17907","pred":"ROOT","subj":"T25040","obj":"T25040"},{"id":"R17908","pred":"acomp","subj":"T25041","obj":"T25040"},{"id":"R17909","pred":"prep","subj":"T25042","obj":"T25041"},{"id":"R17910","pred":"amod","subj":"T25043","obj":"T25048"},{"id":"R17911","pred":"cc","subj":"T25044","obj":"T25043"},{"id":"R17912","pred":"conj","subj":"T25045","obj":"T25043"},{"id":"R17913","pred":"compound","subj":"T25046","obj":"T25047"},{"id":"R17914","pred":"compound","subj":"T25047","obj":"T25048"},{"id":"R17915","pred":"pobj","subj":"T25048","obj":"T25042"},{"id":"R17916","pred":"punct","subj":"T25049","obj":"T25040"}],"text":"10.1371/journal.pone.0057855.g006 Figure 6 C/EBP-β is essential for constitutive and LPS-induced SerpinB2 mRNA expression."}

    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T24639","span":{"begin":112,"end":122},"obj":"NN"},{"id":"T24638","span":{"begin":107,"end":111},"obj":"NN"},{"id":"T24637","span":{"begin":98,"end":106},"obj":"NN"},{"id":"T24636","span":{"begin":86,"end":97},"obj":"JJ"},{"id":"T24635","span":{"begin":82,"end":85},"obj":"CC"},{"id":"T24634","span":{"begin":69,"end":81},"obj":"JJ"},{"id":"T24633","span":{"begin":65,"end":68},"obj":"IN"},{"id":"T24632","span":{"begin":55,"end":64},"obj":"JJ"},{"id":"T24631","span":{"begin":52,"end":54},"obj":"VB"},{"id":"T24630","span":{"begin":44,"end":51},"obj":"NN"}],"relations":[{"id":"R17623","pred":"arg1Of","subj":"T24630","obj":"T24631"},{"id":"R17624","pred":"arg1Of","subj":"T24630","obj":"T24632"},{"id":"R17625","pred":"arg2Of","subj":"T24632","obj":"T24631"},{"id":"R17626","pred":"arg1Of","subj":"T24632","obj":"T24633"},{"id":"R17627","pred":"arg1Of","subj":"T24634","obj":"T24635"},{"id":"R17628","pred":"arg2Of","subj":"T24636","obj":"T24635"},{"id":"R17629","pred":"arg2Of","subj":"T24639","obj":"T24633"},{"id":"R17630","pred":"arg1Of","subj":"T24639","obj":"T24634"},{"id":"R17631","pred":"arg1Of","subj":"T24639","obj":"T24636"},{"id":"R17632","pred":"arg1Of","subj":"T24639","obj":"T24637"},{"id":"R17633","pred":"arg1Of","subj":"T24639","obj":"T24638"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"10.1371/journal.pone.0057855.g006 Figure 6 C/EBP-β is essential for constitutive and LPS-induced SerpinB2 mRNA expression."}

    bionlp-st-ge-2016-test-proteins

    {"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T24605","span":{"begin":98,"end":106},"obj":"Protein"},{"id":"T24604","span":{"begin":44,"end":51},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"10.1371/journal.pone.0057855.g006 Figure 6 C/EBP-β is essential for constitutive and LPS-induced SerpinB2 mRNA expression."}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T24853","span":{"begin":44,"end":51},"obj":"http://www.uniprot.org/uniprot/P28033"},{"id":"T24861","span":{"begin":98,"end":106},"obj":"http://www.uniprot.org/uniprot/P05120"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"10.1371/journal.pone.0057855.g006 Figure 6 C/EBP-β is essential for constitutive and LPS-induced SerpinB2 mRNA expression."}

    sentences

    {"project":"sentences","denotations":[{"id":"T24569","span":{"begin":44,"end":123},"obj":"Sentence"},{"id":"T196","span":{"begin":0,"end":123},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"10.1371/journal.pone.0057855.g006 Figure 6 C/EBP-β is essential for constitutive and LPS-induced SerpinB2 mRNA expression."}

    simple1

    {"project":"simple1","denotations":[{"id":"T24618","span":{"begin":98,"end":106},"obj":"Protein"},{"id":"T24617","span":{"begin":44,"end":51},"obj":"Protein"}],"text":"10.1371/journal.pone.0057855.g006 Figure 6 C/EBP-β is essential for constitutive and LPS-induced SerpinB2 mRNA expression."}

    BioNLP16_DUT

    {"project":"BioNLP16_DUT","denotations":[{"id":"T24843","span":{"begin":55,"end":64},"obj":"Positive_regulation"},{"id":"T24842","span":{"begin":86,"end":97},"obj":"Positive_regulation"},{"id":"T24841","span":{"begin":112,"end":122},"obj":"Transcription"},{"id":"T24829","span":{"begin":98,"end":106},"obj":"Protein"},{"id":"T24828","span":{"begin":44,"end":51},"obj":"Protein"}],"relations":[{"id":"R17808","pred":"causeOf","subj":"T24828","obj":"T24843"},{"id":"R17809","pred":"themeOf","subj":"T24829","obj":"T24842"},{"id":"R17810","pred":"themeOf","subj":"T24829","obj":"T24841"},{"id":"R17821","pred":"themeOf","subj":"T24841","obj":"T24843"},{"id":"R17822","pred":"themeOf","subj":"T24841","obj":"T24842"}],"text":"10.1371/journal.pone.0057855.g006 Figure 6 C/EBP-β is essential for constitutive and LPS-induced SerpinB2 mRNA expression."}

    BioNLP16_Messiy

    {"project":"BioNLP16_Messiy","denotations":[{"id":"T24922","span":{"begin":112,"end":122},"obj":"Transcription"},{"id":"T24910","span":{"begin":98,"end":106},"obj":"Protein"},{"id":"T24909","span":{"begin":44,"end":51},"obj":"Protein"},{"id":"T24924","span":{"begin":86,"end":97},"obj":"Positive_regulation"},{"id":"T24923","span":{"begin":55,"end":64},"obj":"Positive_regulation"}],"relations":[{"id":"R17844","pred":"themeOf","subj":"T24910","obj":"T24922"},{"id":"R17857","pred":"themeOf","subj":"T24922","obj":"T24923"},{"id":"R17858","pred":"themeOf","subj":"T24922","obj":"T24924"},{"id":"R17843","pred":"causeOf","subj":"T24909","obj":"T24923"}],"text":"10.1371/journal.pone.0057855.g006 Figure 6 C/EBP-β is essential for constitutive and LPS-induced SerpinB2 mRNA expression."}

    DLUT931

    {"project":"DLUT931","denotations":[{"id":"T24899","span":{"begin":86,"end":97},"obj":"Positive_regulation"},{"id":"T24898","span":{"begin":55,"end":64},"obj":"Positive_regulation"},{"id":"T24897","span":{"begin":112,"end":122},"obj":"Transcription"},{"id":"T24885","span":{"begin":98,"end":106},"obj":"Protein"},{"id":"T24884","span":{"begin":44,"end":51},"obj":"Protein"}],"relations":[{"id":"R17831","pred":"themeOf","subj":"T24885","obj":"T24897"},{"id":"R17839","pred":"themeOf","subj":"T24897","obj":"T24898"},{"id":"R17830","pred":"causeOf","subj":"T24884","obj":"T24898"},{"id":"R17840","pred":"themeOf","subj":"T24897","obj":"T24899"}],"text":"10.1371/journal.pone.0057855.g006 Figure 6 C/EBP-β is essential for constitutive and LPS-induced SerpinB2 mRNA expression."}

    bionlp-st-ge-2016-test-ihmc

    {"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T25032","span":{"begin":65,"end":122},"obj":"Gene_expression"},{"id":"T25028","span":{"begin":44,"end":51},"obj":"Protein"},{"id":"T25021","span":{"begin":98,"end":111},"obj":"Protein"},{"id":"T25020","span":{"begin":98,"end":106},"obj":"Protein"},{"id":"T25018","span":{"begin":86,"end":97},"obj":"Entity"}],"relations":[{"id":"R17902","pred":"themeOf","subj":"T25021","obj":"T25032"}],"text":"10.1371/journal.pone.0057855.g006 Figure 6 C/EBP-β is essential for constitutive and LPS-induced SerpinB2 mRNA expression."}

    bionlp-st-ge-2016-test-tees

    {"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T24937","span":{"begin":55,"end":64},"obj":"Positive_regulation"},{"id":"T24936","span":{"begin":112,"end":122},"obj":"Gene_expression"},{"id":"T24935","span":{"begin":98,"end":111},"obj":"Protein"},{"id":"T24934","span":{"begin":44,"end":51},"obj":"Protein"}],"relations":[{"id":"R17862","pred":"causeOf","subj":"T24934","obj":"T24937"},{"id":"R17863","pred":"themeOf","subj":"T24935","obj":"T24936"},{"id":"R17864","pred":"themeOf","subj":"T24936","obj":"T24937"}],"text":"10.1371/journal.pone.0057855.g006 Figure 6 C/EBP-β is essential for constitutive and LPS-induced SerpinB2 mRNA expression."}

    testone

    {"project":"testone","denotations":[{"id":"T24530","span":{"begin":107,"end":122},"obj":"Transcription"},{"id":"T24529","span":{"begin":90,"end":97},"obj":"Positive_regulation"},{"id":"T24528","span":{"begin":55,"end":64},"obj":"Positive_regulation"},{"id":"T24516","span":{"begin":98,"end":106},"obj":"Protein"},{"id":"T24515","span":{"begin":44,"end":51},"obj":"Protein"}],"relations":[{"id":"R17591","pred":"causeOf","subj":"T24515","obj":"T24528"},{"id":"R17592","pred":"themeOf","subj":"T24516","obj":"T24530"},{"id":"R17596","pred":"themeOf","subj":"T24529","obj":"T24528"},{"id":"R17597","pred":"themeOf","subj":"T24530","obj":"T24529"}],"text":"10.1371/journal.pone.0057855.g006 Figure 6 C/EBP-β is essential for constitutive and LPS-induced SerpinB2 mRNA expression."}

    test3

    {"project":"test3","denotations":[{"id":"T24551","span":{"begin":107,"end":122},"obj":"Transcription"},{"id":"T24550","span":{"begin":98,"end":106},"obj":"Protein"},{"id":"T24549","span":{"begin":90,"end":97},"obj":"Positive_regulation"},{"id":"T24548","span":{"begin":44,"end":51},"obj":"Protein"},{"id":"T24536","span":{"begin":98,"end":106},"obj":"Protein"},{"id":"T24535","span":{"begin":44,"end":51},"obj":"Protein"}],"relations":[{"id":"R17598","pred":"causeOf","subj":"T24548","obj":"T24549"},{"id":"R17599","pred":"themeOf","subj":"T24550","obj":"T24551"},{"id":"R17600","pred":"themeOf","subj":"T24551","obj":"T24549"}],"text":"10.1371/journal.pone.0057855.g006 Figure 6 C/EBP-β is essential for constitutive and LPS-induced SerpinB2 mRNA expression."}