PMC:3589482 / 29546-29651 JSONTXT

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    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T13611","span":{"begin":97,"end":105},"obj":"NNP"},{"id":"T13610","span":{"begin":88,"end":96},"obj":"NNP"},{"id":"T13609","span":{"begin":79,"end":87},"obj":"NNP"},{"id":"T13608","span":{"begin":75,"end":78},"obj":"DT"},{"id":"T13607","span":{"begin":72,"end":74},"obj":"IN"},{"id":"T13606","span":{"begin":64,"end":71},"obj":"NNP"},{"id":"T13605","span":{"begin":58,"end":63},"obj":"NNP"},{"id":"T13604","span":{"begin":54,"end":57},"obj":"DT"},{"id":"T13603","span":{"begin":51,"end":53},"obj":"TO"},{"id":"T13602","span":{"begin":45,"end":50},"obj":"VBZ"},{"id":"T13601","span":{"begin":40,"end":44},"obj":"WDT"},{"id":"T13600","span":{"begin":33,"end":39},"obj":"NNP"},{"id":"T13599","span":{"begin":25,"end":32},"obj":"NNP"},{"id":"T13598","span":{"begin":13,"end":24},"obj":"JJ"},{"id":"T13597","span":{"begin":11,"end":12},"obj":"DT"},{"id":"T13596","span":{"begin":8,"end":10},"obj":"VBZ"},{"id":"T13595","span":{"begin":6,"end":7},"obj":"NN"},{"id":"T13594","span":{"begin":5,"end":6},"obj":":"},{"id":"T13593","span":{"begin":0,"end":5},"obj":"SYM"}],"relations":[{"id":"R10013","pred":"amod","subj":"T13593","obj":"T13595"},{"id":"R10014","pred":"punct","subj":"T13594","obj":"T13595"},{"id":"R10015","pred":"nsubj","subj":"T13595","obj":"T13596"},{"id":"R10016","pred":"ROOT","subj":"T13596","obj":"T13596"},{"id":"R10017","pred":"det","subj":"T13597","obj":"T13600"},{"id":"R10018","pred":"amod","subj":"T13598","obj":"T13600"},{"id":"R10019","pred":"compound","subj":"T13599","obj":"T13600"},{"id":"R10021","pred":"nsubj","subj":"T13601","obj":"T13602"},{"id":"R10022","pred":"relcl","subj":"T13602","obj":"T13600"},{"id":"R10023","pred":"prep","subj":"T13603","obj":"T13602"},{"id":"R10024","pred":"det","subj":"T13604","obj":"T13606"},{"id":"R10025","pred":"compound","subj":"T13605","obj":"T13606"},{"id":"R10026","pred":"pobj","subj":"T13606","obj":"T13603"},{"id":"R10027","pred":"prep","subj":"T13607","obj":"T13606"},{"id":"R10028","pred":"det","subj":"T13608","obj":"T13610"},{"id":"R10029","pred":"compound","subj":"T13609","obj":"T13610"},{"id":"R10030","pred":"pobj","subj":"T13610","obj":"T13607"},{"id":"R10031","pred":"prep","subj":"T13611","obj":"T13610"}],"text":"C/EBP-β is a LPS-induced Nuclear Factor that Binds to the C/EBP Element of the SerpinB2 Proximal Promoter"}

    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T13270","span":{"begin":97,"end":105},"obj":"NN"},{"id":"T13269","span":{"begin":88,"end":96},"obj":"JJ"},{"id":"T13268","span":{"begin":79,"end":87},"obj":"NN"},{"id":"T13267","span":{"begin":75,"end":78},"obj":"DT"},{"id":"T13266","span":{"begin":72,"end":74},"obj":"IN"},{"id":"T13265","span":{"begin":64,"end":71},"obj":"NN"},{"id":"T13264","span":{"begin":58,"end":63},"obj":"NN"},{"id":"T13263","span":{"begin":54,"end":57},"obj":"DT"},{"id":"T13262","span":{"begin":51,"end":53},"obj":"TO"},{"id":"T13261","span":{"begin":45,"end":50},"obj":"VB"},{"id":"T13260","span":{"begin":40,"end":44},"obj":"WDT"},{"id":"T13259","span":{"begin":33,"end":39},"obj":"NN"},{"id":"T13258","span":{"begin":25,"end":32},"obj":"JJ"},{"id":"T13257","span":{"begin":13,"end":24},"obj":"JJ"},{"id":"T13256","span":{"begin":11,"end":12},"obj":"DT"},{"id":"T13255","span":{"begin":8,"end":10},"obj":"VB"},{"id":"T13254","span":{"begin":0,"end":7},"obj":"NN"}],"relations":[{"id":"R9773","pred":"arg1Of","subj":"T13254","obj":"T13255"},{"id":"R9774","pred":"arg2Of","subj":"T13259","obj":"T13255"},{"id":"R9775","pred":"arg1Of","subj":"T13259","obj":"T13256"},{"id":"R9776","pred":"arg1Of","subj":"T13259","obj":"T13257"},{"id":"R9777","pred":"arg1Of","subj":"T13259","obj":"T13258"},{"id":"R9778","pred":"arg1Of","subj":"T13259","obj":"T13260"},{"id":"R9779","pred":"arg1Of","subj":"T13259","obj":"T13261"},{"id":"R9780","pred":"arg1Of","subj":"T13261","obj":"T13262"},{"id":"R9781","pred":"arg2Of","subj":"T13265","obj":"T13262"},{"id":"R9782","pred":"arg1Of","subj":"T13265","obj":"T13263"},{"id":"R9783","pred":"arg1Of","subj":"T13265","obj":"T13264"},{"id":"R9784","pred":"arg1Of","subj":"T13265","obj":"T13266"},{"id":"R9785","pred":"arg2Of","subj":"T13270","obj":"T13266"},{"id":"R9786","pred":"arg1Of","subj":"T13270","obj":"T13267"},{"id":"R9787","pred":"arg1Of","subj":"T13270","obj":"T13268"},{"id":"R9788","pred":"arg1Of","subj":"T13270","obj":"T13269"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"C/EBP-β is a LPS-induced Nuclear Factor that Binds to the C/EBP Element of the SerpinB2 Proximal Promoter"}

    bionlp-st-ge-2016-coref

    {"project":"bionlp-st-ge-2016-coref","denotations":[{"id":"T13180","span":{"begin":25,"end":39},"obj":"Antecedent"},{"id":"T13179","span":{"begin":40,"end":44},"obj":"Anaphor"},{"id":"T13178","span":{"begin":0,"end":7},"obj":"Antecedent"},{"id":"T13177","span":{"begin":25,"end":39},"obj":"Anaphor"}],"relations":[{"id":"R9767","pred":"boundBy","subj":"T13177","obj":"T13178"},{"id":"R9768","pred":"boundBy","subj":"T13179","obj":"T13177"}],"namespaces":[{"prefix":"_base","uri":"https://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"C/EBP-β is a LPS-induced Nuclear Factor that Binds to the C/EBP Element of the SerpinB2 Proximal Promoter"}

    bionlp-st-ge-2016-test-proteins

    {"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T13187","span":{"begin":79,"end":87},"obj":"Protein"},{"id":"T13186","span":{"begin":0,"end":7},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"C/EBP-β is a LPS-induced Nuclear Factor that Binds to the C/EBP Element of the SerpinB2 Proximal Promoter"}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T13471","span":{"begin":79,"end":87},"obj":"http://www.uniprot.org/uniprot/P05120"},{"id":"T13466","span":{"begin":0,"end":7},"obj":"http://www.uniprot.org/uniprot/P28033"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"C/EBP-β is a LPS-induced Nuclear Factor that Binds to the C/EBP Element of the SerpinB2 Proximal Promoter"}

    sentences

    {"project":"sentences","denotations":[{"id":"T13141","span":{"begin":0,"end":105},"obj":"Sentence"},{"id":"T181","span":{"begin":0,"end":105},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"C/EBP-β is a LPS-induced Nuclear Factor that Binds to the C/EBP Element of the SerpinB2 Proximal Promoter"}

    simple1

    {"project":"simple1","denotations":[{"id":"T13231","span":{"begin":79,"end":87},"obj":"Protein"},{"id":"T13230","span":{"begin":0,"end":7},"obj":"Protein"}],"text":"C/EBP-β is a LPS-induced Nuclear Factor that Binds to the C/EBP Element of the SerpinB2 Proximal Promoter"}

    BioNLP16_DUT

    {"project":"BioNLP16_DUT","denotations":[{"id":"T13465","span":{"begin":13,"end":24},"obj":"Positive_regulation"},{"id":"T13464","span":{"begin":45,"end":50},"obj":"Binding"},{"id":"T13453","span":{"begin":79,"end":87},"obj":"Protein"},{"id":"T13452","span":{"begin":0,"end":7},"obj":"Protein"}],"relations":[{"id":"R9977","pred":"themeOf","subj":"T13452","obj":"T13465"},{"id":"R9978","pred":"themeOf","subj":"T13452","obj":"T13464"}],"text":"C/EBP-β is a LPS-induced Nuclear Factor that Binds to the C/EBP Element of the SerpinB2 Proximal Promoter"}

    BioNLP16_Messiy

    {"project":"BioNLP16_Messiy","denotations":[{"id":"T13510","span":{"begin":13,"end":24},"obj":"Positive_regulation"},{"id":"T13509","span":{"begin":45,"end":50},"obj":"Binding"},{"id":"T13498","span":{"begin":79,"end":87},"obj":"Protein"},{"id":"T13497","span":{"begin":0,"end":7},"obj":"Protein"}],"relations":[{"id":"R9981","pred":"themeOf","subj":"T13497","obj":"T13510"},{"id":"R9982","pred":"themeOf","subj":"T13497","obj":"T13509"}],"text":"C/EBP-β is a LPS-induced Nuclear Factor that Binds to the C/EBP Element of the SerpinB2 Proximal Promoter"}

    DLUT931

    {"project":"DLUT931","denotations":[{"id":"T13484","span":{"begin":45,"end":50},"obj":"Binding"},{"id":"T13473","span":{"begin":79,"end":87},"obj":"Protein"},{"id":"T13472","span":{"begin":0,"end":7},"obj":"Protein"}],"relations":[{"id":"R9979","pred":"themeOf","subj":"T13472","obj":"T13484"},{"id":"R9980","pred":"themeOf","subj":"T13473","obj":"T13484"}],"text":"C/EBP-β is a LPS-induced Nuclear Factor that Binds to the C/EBP Element of the SerpinB2 Proximal Promoter"}

    bionlp-st-ge-2016-test-ihmc

    {"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T13591","span":{"begin":58,"end":63},"obj":"Protein"},{"id":"T13587","span":{"begin":0,"end":7},"obj":"Protein"},{"id":"T13586","span":{"begin":79,"end":87},"obj":"Protein"},{"id":"T13572","span":{"begin":13,"end":24},"obj":"Entity"},{"id":"T13565","span":{"begin":72,"end":105},"obj":"Entity"}],"text":"C/EBP-β is a LPS-induced Nuclear Factor that Binds to the C/EBP Element of the SerpinB2 Proximal Promoter"}

    bionlp-st-ge-2016-test-tees

    {"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T13511","span":{"begin":0,"end":7},"obj":"Protein"},{"id":"T13518","span":{"begin":45,"end":50},"obj":"Binding"},{"id":"T13517","span":{"begin":45,"end":50},"obj":"Binding"},{"id":"T13516","span":{"begin":45,"end":50},"obj":"Binding"},{"id":"T13515","span":{"begin":45,"end":50},"obj":"Binding"},{"id":"T13514","span":{"begin":97,"end":105},"obj":"Entity"},{"id":"T13513","span":{"begin":79,"end":96},"obj":"Protein"},{"id":"T13512","span":{"begin":58,"end":71},"obj":"Protein"}],"relations":[{"id":"R9983","pred":"themeOf","subj":"T13511","obj":"T13515"},{"id":"R9984","pred":"themeOf","subj":"T13511","obj":"T13516"},{"id":"R9985","pred":"themeOf","subj":"T13511","obj":"T13518"},{"id":"R9986","pred":"themeOf","subj":"T13512","obj":"T13515"},{"id":"R9987","pred":"themeOf","subj":"T13512","obj":"T13517"},{"id":"R9988","pred":"themeOf","subj":"T13512","obj":"T13518"},{"id":"R9989","pred":"themeOf","subj":"T13513","obj":"T13516"},{"id":"R9990","pred":"themeOf","subj":"T13513","obj":"T13517"},{"id":"R9991","pred":"themeOf","subj":"T13513","obj":"T13518"},{"id":"R9992","pred":"partOf","subj":"T13513","obj":"T13514"},{"id":"R9993","pred":"Site","subj":"T13514","obj":"T13515"},{"id":"R9994","pred":"Site","subj":"T13514","obj":"T13516"},{"id":"R9995","pred":"Site","subj":"T13514","obj":"T13517"},{"id":"R9996","pred":"Site","subj":"T13514","obj":"T13518"}],"text":"C/EBP-β is a LPS-induced Nuclear Factor that Binds to the C/EBP Element of the SerpinB2 Proximal Promoter"}

    testone

    {"project":"testone","denotations":[{"id":"T13113","span":{"begin":97,"end":105},"obj":"Entity"},{"id":"T13112","span":{"begin":64,"end":71},"obj":"Entity"},{"id":"T13111","span":{"begin":45,"end":50},"obj":"Binding"},{"id":"T13110","span":{"begin":17,"end":24},"obj":"Positive_regulation"},{"id":"T13099","span":{"begin":79,"end":87},"obj":"Protein"},{"id":"T13098","span":{"begin":0,"end":7},"obj":"Protein"}],"relations":[{"id":"R9745","pred":"causeOf","subj":"T13098","obj":"T13110"},{"id":"R9746","pred":"themeOf","subj":"T13098","obj":"T13111"},{"id":"R9747","pred":"themeOf","subj":"T13111","obj":"T13110"},{"id":"R9748","pred":"themeOf","subj":"T13113","obj":"T13111"}],"text":"C/EBP-β is a LPS-induced Nuclear Factor that Binds to the C/EBP Element of the SerpinB2 Proximal Promoter"}

    test3

    {"project":"test3","denotations":[{"id":"T13130","span":{"begin":79,"end":87},"obj":"Protein"},{"id":"T13129","span":{"begin":45,"end":50},"obj":"Binding"},{"id":"T13128","span":{"begin":17,"end":24},"obj":"Positive_regulation"},{"id":"T13127","span":{"begin":0,"end":7},"obj":"Protein"},{"id":"T13116","span":{"begin":79,"end":87},"obj":"Protein"},{"id":"T13115","span":{"begin":0,"end":7},"obj":"Protein"}],"relations":[{"id":"R9749","pred":"themeOf","subj":"T13127","obj":"T13129"}],"text":"C/EBP-β is a LPS-induced Nuclear Factor that Binds to the C/EBP Element of the SerpinB2 Proximal Promoter"}