PMC:3589482 / 21999-22188 JSONTXT

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{"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T10421","span":{"begin":160,"end":168},"obj":"Protein"},{"id":"T10420","span":{"begin":89,"end":97},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"To look for potential cis-acting elements that might mediate transcription of the murine SerpinB2 gene and the response to LPS, we aligned the murine and human SerpinB2 5′ flanking regions."}

{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T10841","span":{"begin":160,"end":168},"obj":"http://www.uniprot.org/uniprot/P05120"},{"id":"T10840","span":{"begin":89,"end":97},"obj":"http://www.uniprot.org/uniprot/P05120"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"To look for potential cis-acting elements that might mediate transcription of the murine SerpinB2 gene and the response to LPS, we aligned the murine and human SerpinB2 5′ flanking regions."}

{"project":"GO-BP","denotations":[{"id":"T10432","span":{"begin":111,"end":126},"obj":"http://purl.obolibrary.org/obo/GO_0032496"},{"id":"T10429","span":{"begin":61,"end":74},"obj":"http://purl.obolibrary.org/obo/GO_0006351"}],"text":"To look for potential cis-acting elements that might mediate transcription of the murine SerpinB2 gene and the response to LPS, we aligned the murine and human SerpinB2 5′ flanking regions."}

{"project":"sentences","denotations":[{"id":"T10390","span":{"begin":0,"end":189},"obj":"Sentence"},{"id":"T141","span":{"begin":0,"end":189},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"To look for potential cis-acting elements that might mediate transcription of the murine SerpinB2 gene and the response to LPS, we aligned the murine and human SerpinB2 5′ flanking regions."}

{"project":"simple1","denotations":[{"id":"T10455","span":{"begin":160,"end":168},"obj":"Protein"},{"id":"T10454","span":{"begin":89,"end":97},"obj":"Protein"}],"text":"To look for potential cis-acting elements that might mediate transcription of the murine SerpinB2 gene and the response to LPS, we aligned the murine and human SerpinB2 5′ flanking regions."}

{"project":"BioNLP16_DUT","denotations":[{"id":"T10835","span":{"begin":53,"end":60},"obj":"Positive_regulation"},{"id":"T10834","span":{"begin":61,"end":74},"obj":"Transcription"},{"id":"T10833","span":{"begin":111,"end":119},"obj":"Regulation"},{"id":"T10825","span":{"begin":160,"end":168},"obj":"Protein"},{"id":"T10824","span":{"begin":89,"end":97},"obj":"Protein"}],"relations":[{"id":"R7985","pred":"themeOf","subj":"T10824","obj":"T10834"},{"id":"R7986","pred":"themeOf","subj":"T10824","obj":"T10833"},{"id":"R7988","pred":"themeOf","subj":"T10834","obj":"T10835"}],"text":"To look for potential cis-acting elements that might mediate transcription of the murine SerpinB2 gene and the response to LPS, we aligned the murine and human SerpinB2 5′ flanking regions."}

{"project":"BioNLP16_Messiy","denotations":[{"id":"T10889","span":{"begin":53,"end":60},"obj":"Positive_regulation"},{"id":"T10888","span":{"begin":61,"end":74},"obj":"Transcription"},{"id":"T10880","span":{"begin":160,"end":168},"obj":"Protein"},{"id":"T10879","span":{"begin":89,"end":97},"obj":"Protein"}],"relations":[{"id":"R8000","pred":"themeOf","subj":"T10879","obj":"T10888"},{"id":"R8004","pred":"themeOf","subj":"T10888","obj":"T10889"}],"text":"To look for potential cis-acting elements that might mediate transcription of the murine SerpinB2 gene and the response to LPS, we aligned the murine and human SerpinB2 5′ flanking regions."}

{"project":"DLUT931","denotations":[{"id":"T10873","span":{"begin":53,"end":60},"obj":"Positive_regulation"},{"id":"T10872","span":{"begin":61,"end":74},"obj":"Transcription"},{"id":"T10864","span":{"begin":160,"end":168},"obj":"Protein"},{"id":"T10863","span":{"begin":89,"end":97},"obj":"Protein"}],"relations":[{"id":"R7991","pred":"themeOf","subj":"T10863","obj":"T10872"},{"id":"R7997","pred":"themeOf","subj":"T10872","obj":"T10873"}],"text":"To look for potential cis-acting elements that might mediate transcription of the murine SerpinB2 gene and the response to LPS, we aligned the murine and human SerpinB2 5′ flanking regions."}

{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T10972","span":{"begin":89,"end":97},"obj":"Protein"},{"id":"T10971","span":{"begin":12,"end":32},"obj":"Protein"},{"id":"T10960","span":{"begin":160,"end":168},"obj":"Protein"},{"id":"T10943","span":{"begin":78,"end":102},"obj":"Protein"}],"text":"To look for potential cis-acting elements that might mediate transcription of the murine SerpinB2 gene and the response to LPS, we aligned the murine and human SerpinB2 5′ flanking regions."}

{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T10898","span":{"begin":53,"end":60},"obj":"Positive_regulation"},{"id":"T10897","span":{"begin":61,"end":74},"obj":"Transcription"},{"id":"T10896","span":{"begin":82,"end":102},"obj":"Protein"}],"relations":[{"id":"R8008","pred":"themeOf","subj":"T10896","obj":"T10897"},{"id":"R8009","pred":"themeOf","subj":"T10897","obj":"T10898"}],"text":"To look for potential cis-acting elements that might mediate transcription of the murine SerpinB2 gene and the response to LPS, we aligned the murine and human SerpinB2 5′ flanking regions."}

{"project":"testone","denotations":[{"id":"T10354","span":{"begin":160,"end":168},"obj":"Protein"},{"id":"T10353","span":{"begin":89,"end":97},"obj":"Protein"}],"text":"To look for potential cis-acting elements that might mediate transcription of the murine SerpinB2 gene and the response to LPS, we aligned the murine and human SerpinB2 5′ flanking regions."}

{"project":"test3","denotations":[{"id":"T10375","span":{"begin":160,"end":168},"obj":"Protein"},{"id":"T10374","span":{"begin":89,"end":97},"obj":"Protein"},{"id":"T10365","span":{"begin":160,"end":168},"obj":"Protein"},{"id":"T10364","span":{"begin":89,"end":97},"obj":"Protein"}],"text":"To look for potential cis-acting elements that might mediate transcription of the murine SerpinB2 gene and the response to LPS, we aligned the murine and human SerpinB2 5′ flanking regions."}