PMC:3589482 / 20015-20359
Annnotations
bionlp-st-ge-2016-spacy-parsed
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pmc-enju-pas
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bionlp-st-ge-2016-test-proteins
{"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T9536","span":{"begin":281,"end":289},"obj":"Protein"},{"id":"T9535","span":{"begin":141,"end":149},"obj":"Protein"},{"id":"T9534","span":{"begin":22,"end":30},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"While deletion of the SerpinB2 promoter from −189 to −87 eliminated the LPS response and marginally reduced the PMA response, the −87 murine SerpinB2 promoter construct was still partially responsive to PMA, indicating that cis-acting elements mediating the response of the murine SerpinB2 promoter to PMA also lie downstream of nucleotide −87."}
bionlp-st-ge-2016-uniprot
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GO-BP
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sentences
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simple1
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BioNLP16_DUT
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BioNLP16_Messiy
{"project":"BioNLP16_Messiy","denotations":[{"id":"T9940","span":{"begin":6,"end":14},"obj":"Negative_regulation"},{"id":"T9936","span":{"begin":22,"end":30},"obj":"Protein"},{"id":"T9935","span":{"begin":281,"end":289},"obj":"Protein"},{"id":"T9934","span":{"begin":141,"end":149},"obj":"Protein"}],"relations":[{"id":"R7282","pred":"themeOf","subj":"T9936","obj":"T9940"}],"text":"While deletion of the SerpinB2 promoter from −189 to −87 eliminated the LPS response and marginally reduced the PMA response, the −87 murine SerpinB2 promoter construct was still partially responsive to PMA, indicating that cis-acting elements mediating the response of the murine SerpinB2 promoter to PMA also lie downstream of nucleotide −87."}
DLUT931
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bionlp-st-ge-2016-test-ihmc
{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T10017","span":{"begin":302,"end":305},"obj":"Entity"},{"id":"T10015","span":{"begin":329,"end":339},"obj":"Entity"},{"id":"T10014","span":{"begin":22,"end":30},"obj":"Protein"},{"id":"T10012","span":{"begin":126,"end":149},"obj":"Protein"},{"id":"T10004","span":{"begin":203,"end":207},"obj":"Entity"},{"id":"T10001","span":{"begin":281,"end":289},"obj":"Protein"},{"id":"T9994","span":{"begin":72,"end":75},"obj":"Entity"},{"id":"T9993","span":{"begin":112,"end":115},"obj":"Entity"},{"id":"T9989","span":{"begin":15,"end":39},"obj":"Entity"},{"id":"T9984","span":{"begin":150,"end":168},"obj":"Entity"},{"id":"T9976","span":{"begin":270,"end":298},"obj":"Entity"}],"relations":[{"id":"R7300","pred":"partOf","subj":"T9976","obj":"T10001"},{"id":"R7302","pred":"partOf","subj":"T9989","obj":"T10014"}],"text":"While deletion of the SerpinB2 promoter from −189 to −87 eliminated the LPS response and marginally reduced the PMA response, the −87 murine SerpinB2 promoter construct was still partially responsive to PMA, indicating that cis-acting elements mediating the response of the murine SerpinB2 promoter to PMA also lie downstream of nucleotide −87."}
bionlp-st-ge-2016-test-tees
{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T9957","span":{"begin":244,"end":253},"obj":"Positive_regulation"},{"id":"T9956","span":{"begin":258,"end":266},"obj":"Positive_regulation"},{"id":"T9955","span":{"begin":100,"end":107},"obj":"Negative_regulation"},{"id":"T9954","span":{"begin":6,"end":14},"obj":"Negative_regulation"},{"id":"T9953","span":{"begin":274,"end":298},"obj":"Protein"},{"id":"T9952","span":{"begin":22,"end":39},"obj":"Protein"}],"relations":[{"id":"R7288","pred":"themeOf","subj":"T9952","obj":"T9954"},{"id":"R7289","pred":"themeOf","subj":"T9953","obj":"T9956"},{"id":"R7290","pred":"themeOf","subj":"T9954","obj":"T9955"},{"id":"R7291","pred":"themeOf","subj":"T9956","obj":"T9957"}],"text":"While deletion of the SerpinB2 promoter from −189 to −87 eliminated the LPS response and marginally reduced the PMA response, the −87 murine SerpinB2 promoter construct was still partially responsive to PMA, indicating that cis-acting elements mediating the response of the murine SerpinB2 promoter to PMA also lie downstream of nucleotide −87."}
testone
{"project":"testone","denotations":[{"id":"T9442","span":{"begin":281,"end":289},"obj":"Protein"},{"id":"T9441","span":{"begin":141,"end":149},"obj":"Protein"},{"id":"T9440","span":{"begin":22,"end":30},"obj":"Protein"}],"text":"While deletion of the SerpinB2 promoter from −189 to −87 eliminated the LPS response and marginally reduced the PMA response, the −87 murine SerpinB2 promoter construct was still partially responsive to PMA, indicating that cis-acting elements mediating the response of the murine SerpinB2 promoter to PMA also lie downstream of nucleotide −87."}
test3
{"project":"test3","denotations":[{"id":"T9455","span":{"begin":281,"end":289},"obj":"Protein"},{"id":"T9454","span":{"begin":141,"end":149},"obj":"Protein"},{"id":"T9453","span":{"begin":22,"end":30},"obj":"Protein"},{"id":"T9467","span":{"begin":281,"end":289},"obj":"Protein"},{"id":"T9466","span":{"begin":141,"end":149},"obj":"Protein"},{"id":"T9465","span":{"begin":22,"end":30},"obj":"Protein"},{"id":"T9464","span":{"begin":6,"end":14},"obj":"Negative_regulation"}],"text":"While deletion of the SerpinB2 promoter from −189 to −87 eliminated the LPS response and marginally reduced the PMA response, the −87 murine SerpinB2 promoter construct was still partially responsive to PMA, indicating that cis-acting elements mediating the response of the murine SerpinB2 promoter to PMA also lie downstream of nucleotide −87."}