PMC:3589482 / 18680-20359
Annnotations
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T10330 | 1678-1679 | . | denotes | . |
T10329 | 1676-1678 | CD | denotes | 87 |
T10328 | 1675-1676 | NN | denotes | − |
T10327 | 1664-1674 | NN | denotes | nucleotide |
T10326 | 1661-1663 | IN | denotes | of |
T10325 | 1650-1660 | JJ | denotes | downstream |
T10324 | 1646-1649 | VBP | denotes | lie |
T10323 | 1641-1645 | RB | denotes | also |
T10322 | 1637-1640 | NNP | denotes | PMA |
T10321 | 1634-1636 | TO | denotes | to |
T10320 | 1625-1633 | NN | denotes | promoter |
T10319 | 1616-1624 | NNP | denotes | SerpinB2 |
T10318 | 1609-1615 | NN | denotes | murine |
T10317 | 1605-1608 | DT | denotes | the |
T10316 | 1602-1604 | IN | denotes | of |
T10315 | 1593-1601 | NN | denotes | response |
T10314 | 1589-1592 | DT | denotes | the |
T10313 | 1579-1588 | VBG | denotes | mediating |
T10312 | 1570-1578 | NNS | denotes | elements |
T10311 | 1559-1569 | JJ | denotes | cis-acting |
T10310 | 1554-1558 | IN | denotes | that |
T10309 | 1543-1553 | VBG | denotes | indicating |
T10308 | 1541-1542 | , | denotes | , |
T10307 | 1538-1541 | NNP | denotes | PMA |
T10306 | 1535-1537 | TO | denotes | to |
T10305 | 1524-1534 | JJ | denotes | responsive |
T10304 | 1514-1523 | RB | denotes | partially |
T10303 | 1508-1513 | RB | denotes | still |
T10302 | 1504-1507 | VBD | denotes | was |
T10301 | 1494-1503 | VBP | denotes | construct |
T10300 | 1485-1493 | NN | denotes | promoter |
T10174 | 776-780 | IN | denotes | from |
T10173 | 769-775 | NN | denotes | region |
T10172 | 760-768 | NN | denotes | flanking |
T10171 | 758-759 | NN | denotes | ′ |
T10170 | 757-758 | CD | denotes | 5 |
T10169 | 748-756 | CD | denotes | SerpinB2 |
T10168 | 744-747 | DT | denotes | the |
T10167 | 742-743 | , | denotes | , |
T10166 | 740-742 | NNP | denotes | 2B |
T10165 | 735-739 | NNP | denotes | Fig. |
T10164 | 732-734 | IN | denotes | in |
T10163 | 726-731 | VBN | denotes | shown |
T10162 | 723-725 | IN | denotes | As |
T10161 | 721-722 | . | denotes | . |
T10160 | 720-721 | NNP | denotes | ] |
T10159 | 718-720 | CD | denotes | 51 |
T10158 | 717-718 | NNP | denotes | [ |
T10157 | 715-716 | NNP | denotes | ] |
T10156 | 713-715 | CD | denotes | 47 |
T10155 | 712-713 | NNP | denotes | [ |
T10154 | 710-711 | : | denotes | ; |
T10153 | 709-710 | NNP | denotes | ] |
T10152 | 707-709 | CD | denotes | 37 |
T10151 | 706-707 | NNP | denotes | [ |
T10150 | 704-705 | : | denotes | ; |
T10149 | 703-704 | NNP | denotes | ] |
T10148 | 701-703 | CD | denotes | 30 |
T10147 | 700-701 | NNP | denotes | [ |
T10146 | 691-699 | NNS | denotes | elements |
T10145 | 680-690 | JJ | denotes | responsive |
T10144 | 675-679 | NN | denotes | AP-1 |
T10143 | 668-674 | JJ | denotes | distal |
T10142 | 664-667 | CC | denotes | and |
T10141 | 655-663 | JJ | denotes | proximal |
T10140 | 647-654 | JJ | denotes | several |
T10139 | 639-646 | IN | denotes | through |
T10138 | 633-638 | VB | denotes | occur |
T10137 | 630-632 | TO | denotes | to |
T10136 | 624-629 | VBN | denotes | shown |
T10135 | 619-623 | VBN | denotes | been |
T10134 | 615-618 | VBZ | denotes | has |
T10133 | 611-614 | CC | denotes | and |
T10132 | 609-610 | , | denotes | , |
T10131 | 608-609 | NNP | denotes | ] |
T10130 | 606-608 | CD | denotes | 47 |
T10129 | 605-606 | NNP | denotes | [ |
T10128 | 603-604 | NNP | denotes | ] |
T10127 | 601-603 | CD | denotes | 45 |
T10126 | 600-601 | NNP | denotes | [ |
T10125 | 594-599 | NNS | denotes | lines |
T10124 | 589-593 | NN | denotes | cell |
T10123 | 578-588 | NN | denotes | macrophage |
T10122 | 572-577 | JJ | denotes | human |
T10121 | 569-571 | IN | denotes | in |
T10120 | 561-568 | VBN | denotes | studied |
T10119 | 549-560 | RB | denotes | extensively |
T10118 | 544-548 | VBN | denotes | been |
T10117 | 540-543 | VBZ | denotes | has |
T10116 | 529-539 | NN | denotes | regulation |
T10115 | 524-528 | NN | denotes | gene |
T10114 | 515-523 | NNP | denotes | SerpinB2 |
T10113 | 503-514 | JJ | denotes | PMA-induced |
T10112 | 501-502 | . | denotes | . |
T10111 | 491-501 | NN | denotes | comparison |
T10110 | 487-490 | IN | denotes | for |
T10109 | 485-486 | , | denotes | , |
T10108 | 482-485 | NNP | denotes | PMA |
T10107 | 479-481 | CC | denotes | or |
T10106 | 475-478 | NNP | denotes | LPS |
T10105 | 472-474 | IN | denotes | of |
T10104 | 464-471 | NN | denotes | absence |
T10103 | 460-463 | CC | denotes | and |
T10102 | 451-459 | NN | denotes | presence |
T10101 | 447-450 | DT | denotes | the |
T10100 | 444-446 | IN | denotes | in |
T10099 | 435-443 | NN | denotes | activity |
T10098 | 424-434 | NN | denotes | luciferase |
T10097 | 420-423 | IN | denotes | for |
T10096 | 412-419 | VBN | denotes | assayed |
T10095 | 408-411 | CC | denotes | and |
T10094 | 396-407 | NNS | denotes | macrophages |
T10093 | 393-395 | CD | denotes | .7 |
T10092 | 387-393 | NNP | denotes | RAW264 |
T10091 | 373-386 | JJ | denotes | sub-confluent |
T10090 | 368-372 | IN | denotes | into |
T10089 | 356-367 | VBN | denotes | transfected |
T10088 | 344-355 | RB | denotes | transiently |
T10087 | 339-343 | RB | denotes | then |
T10086 | 334-338 | VBD | denotes | were |
T10085 | 323-333 | NNS | denotes | constructs |
T10084 | 314-322 | NN | denotes | reporter |
T10083 | 310-313 | DT | denotes | The |
T10082 | 308-309 | . | denotes | . |
T10081 | 307-308 | -RRB- | denotes | ) |
T10080 | 305-307 | NNP | denotes | 2A |
T10079 | 300-304 | NNP | denotes | Fig. |
T10078 | 299-300 | -LRB- | denotes | ( |
T10077 | 297-298 | -RRB- | denotes | ) |
T10076 | 292-297 | JJ | denotes | Basic |
T10075 | 287-291 | JJ | denotes | pGL3 |
T10074 | 286-287 | -LRB- | denotes | ( |
T10073 | 281-285 | NN | denotes | gene |
T10072 | 272-280 | NN | denotes | reporter |
T10071 | 261-271 | NN | denotes | luciferase |
T10070 | 253-260 | JJ | denotes | firefly |
T10069 | 239-252 | JJ | denotes | promoter-less |
T10068 | 237-238 | DT | denotes | a |
T10067 | 234-236 | IN | denotes | of |
T10066 | 225-233 | RB | denotes | upstream |
T10065 | 218-224 | VBN | denotes | cloned |
T10064 | 213-217 | VBD | denotes | were |
T10063 | 206-212 | NN | denotes | region |
T10062 | 197-205 | NN | denotes | flanking |
T10061 | 195-196 | NN | denotes | ′ |
T10060 | 194-195 | CD | denotes | 5 |
T10059 | 190-193 | DT | denotes | the |
T10058 | 187-189 | IN | denotes | of |
T10057 | 179-186 | NNS | denotes | mutants |
T10056 | 170-178 | NN | denotes | deletion |
T10055 | 160-169 | VBN | denotes | generated |
T10054 | 157-159 | IN | denotes | of |
T10053 | 150-156 | NN | denotes | series |
T10052 | 148-149 | DT | denotes | a |
T10051 | 144-147 | CC | denotes | and |
T10050 | 140-143 | CD | denotes | +92 |
T10049 | 137-139 | TO | denotes | to |
T10048 | 132-136 | CD | denotes | 4480 |
T10047 | 131-132 | VBP | denotes | − |
T10046 | 119-130 | NNS | denotes | nucleotides |
T10045 | 117-118 | , | denotes | , |
T10044 | 113-117 | NN | denotes | gene |
T10043 | 104-112 | NNP | denotes | SerpinB2 |
T10042 | 97-103 | NN | denotes | murine |
T10041 | 93-96 | DT | denotes | the |
T10040 | 90-92 | IN | denotes | of |
T10039 | 83-89 | NN | denotes | region |
T10038 | 74-82 | NN | denotes | flanking |
T10037 | 72-73 | NN | denotes | ′ |
T10036 | 71-72 | CD | denotes | 5 |
T10035 | 67-70 | DT | denotes | the |
T10034 | 64-66 | IN | denotes | in |
T10033 | 60-63 | NNP | denotes | LPS |
T10032 | 57-59 | TO | denotes | to |
T10031 | 46-56 | JJ | denotes | responsive |
T10030 | 37-45 | NNS | denotes | elements |
T10029 | 26-36 | JJ | denotes | regulatory |
T10028 | 15-25 | JJ | denotes | cis-acting |
T10027 | 3-14 | VB | denotes | investigate |
T10026 | 0-2 | TO | denotes | To |
T10299 | 1476-1484 | NNP | denotes | SerpinB2 |
T10298 | 1469-1475 | NN | denotes | murine |
T10297 | 1466-1468 | CD | denotes | 87 |
T10296 | 1465-1466 | NN | denotes | − |
T10295 | 1461-1464 | DT | denotes | the |
T10294 | 1459-1460 | , | denotes | , |
T10293 | 1451-1459 | NN | denotes | response |
T10292 | 1447-1450 | NNP | denotes | PMA |
T10291 | 1443-1446 | DT | denotes | the |
T10290 | 1435-1442 | VBD | denotes | reduced |
T10289 | 1424-1434 | RB | denotes | marginally |
T10288 | 1420-1423 | CC | denotes | and |
T10287 | 1411-1419 | NN | denotes | response |
T10286 | 1407-1410 | NNP | denotes | LPS |
T10285 | 1403-1406 | DT | denotes | the |
T10284 | 1392-1402 | VBD | denotes | eliminated |
T10283 | 1389-1391 | CD | denotes | 87 |
T10282 | 1388-1389 | CD | denotes | − |
T10281 | 1385-1387 | TO | denotes | to |
T10280 | 1381-1384 | CD | denotes | 189 |
T10279 | 1380-1381 | CD | denotes | − |
T10278 | 1375-1379 | IN | denotes | from |
T10277 | 1366-1374 | NN | denotes | promoter |
T10276 | 1357-1365 | NNP | denotes | SerpinB2 |
T10275 | 1353-1356 | DT | denotes | the |
T10274 | 1350-1352 | IN | denotes | of |
T10273 | 1341-1349 | NN | denotes | deletion |
T10272 | 1335-1340 | IN | denotes | While |
T10271 | 1333-1334 | . | denotes | . |
T10270 | 1325-1333 | NN | denotes | deletion |
T10269 | 1320-1324 | DT | denotes | this |
T10268 | 1317-1319 | IN | denotes | by |
T10267 | 1308-1316 | VBN | denotes | affected |
T10266 | 1303-1307 | RBR | denotes | less |
T10265 | 1300-1302 | VBZ | denotes | is |
T10264 | 1296-1299 | NNP | denotes | PMA |
T10263 | 1293-1295 | TO | denotes | to |
T10262 | 1284-1292 | NN | denotes | promoter |
T10261 | 1275-1283 | NNP | denotes | SerpinB2 |
T10260 | 1268-1274 | NN | denotes | murine |
T10259 | 1264-1267 | DT | denotes | the |
T10258 | 1261-1263 | IN | denotes | of |
T10257 | 1252-1260 | NN | denotes | response |
T10256 | 1248-1251 | DT | denotes | the |
T10255 | 1246-1247 | , | denotes | , |
T10254 | 1239-1246 | RB | denotes | however |
T10253 | 1237-1238 | : | denotes | ; |
T10252 | 1234-1237 | CD | denotes | 189 |
T10251 | 1233-1234 | CD | denotes | − |
T10250 | 1229-1232 | CC | denotes | and |
T10249 | 1225-1228 | CD | denotes | 539 |
T10248 | 1224-1225 | CD | denotes | − |
T10247 | 1216-1223 | IN | denotes | between |
T10246 | 1209-1215 | NN | denotes | region |
T10245 | 1205-1208 | DT | denotes | the |
T10244 | 1202-1204 | IN | denotes | in |
T10243 | 1194-1201 | NN | denotes | element |
T10242 | 1185-1193 | NN | denotes | response |
T10241 | 1181-1184 | NNP | denotes | LPS |
T10240 | 1171-1180 | JJ | denotes | essential |
T10239 | 1168-1170 | DT | denotes | an |
T10238 | 1165-1167 | IN | denotes | of |
T10237 | 1156-1164 | NN | denotes | presence |
T10236 | 1152-1155 | DT | denotes | the |
T10235 | 1141-1151 | VBG | denotes | indicating |
T10234 | 1139-1140 | , | denotes | , |
T10233 | 1131-1139 | NN | denotes | promoter |
T10232 | 1127-1130 | DT | denotes | the |
T10231 | 1124-1126 | IN | denotes | of |
T10230 | 1111-1123 | NN | denotes | LPS-response |
T10229 | 1107-1110 | DT | denotes | the |
T10228 | 1097-1106 | VBD | denotes | abolished |
T10227 | 1093-1096 | CD | denotes | 539 |
T10226 | 1092-1093 | CD | denotes | − |
T10225 | 1085-1091 | IN | denotes | beyond |
T10224 | 1076-1084 | NN | denotes | deletion |
T10223 | 1068-1075 | JJ | denotes | Further |
T10222 | 1066-1067 | . | denotes | . |
T10221 | 1060-1066 | NN | denotes | region |
T10220 | 1055-1059 | DT | denotes | this |
T10219 | 1052-1054 | IN | denotes | in |
T10218 | 1044-1051 | NN | denotes | element |
T10217 | 1035-1043 | NN | denotes | silencer |
T10216 | 1033-1034 | DT | denotes | a |
T10215 | 1030-1032 | IN | denotes | of |
T10214 | 1021-1029 | NN | denotes | presence |
T10213 | 1017-1020 | DT | denotes | the |
T10212 | 1006-1016 | VBG | denotes | indicating |
T10211 | 1004-1005 | , | denotes | , |
T10210 | 997-1004 | JJ | denotes | 16-fold |
T10209 | 983-996 | RB | denotes | approximately |
T10208 | 980-982 | TO | denotes | to |
T10207 | 963-979 | NN | denotes | LPS-inducibility |
T10206 | 953-962 | VBD | denotes | increased |
T10205 | 948-952 | CD | denotes | 1341 |
T10204 | 947-948 | CD | denotes | − |
T10203 | 944-946 | TO | denotes | to |
T10202 | 939-943 | CD | denotes | 1686 |
T10201 | 938-939 | CD | denotes | − |
T10200 | 933-937 | IN | denotes | from |
T10199 | 924-932 | NN | denotes | promoter |
T10198 | 915-923 | NNP | denotes | SerpinB2 |
T10197 | 908-914 | NN | denotes | murine |
T10196 | 904-907 | DT | denotes | the |
T10195 | 901-903 | IN | denotes | of |
T10194 | 892-900 | NN | denotes | Deletion |
T10193 | 890-891 | . | denotes | . |
T10192 | 878-890 | RB | denotes | respectively |
T10191 | 876-877 | , | denotes | , |
T10190 | 870-876 | JJ | denotes | 7-fold |
T10189 | 866-869 | CC | denotes | and |
T10188 | 859-865 | JJ | denotes | 2-fold |
T10187 | 845-858 | RB | denotes | approximately |
T10186 | 843-844 | , | denotes | , |
T10185 | 830-843 | NN | denotes | transcription |
T10184 | 816-829 | JJ | denotes | LPS-inducible |
T10183 | 812-815 | CC | denotes | and |
T10182 | 810-811 | : | denotes | - |
T10181 | 807-810 | NNP | denotes | PMA |
T10180 | 802-806 | DT | denotes | both |
T10179 | 794-801 | VBZ | denotes | directs |
T10178 | 790-793 | CD | denotes | +92 |
T10177 | 787-789 | TO | denotes | to |
T10176 | 782-786 | CD | denotes | 4480 |
T10175 | 781-782 | CD | denotes | − |
R7313 | T10026 | T10027 | aux | To,investigate |
R7315 | T10028 | T10030 | amod | cis-acting,elements |
R7316 | T10029 | T10030 | amod | regulatory,elements |
R7317 | T10030 | T10027 | dobj | elements,investigate |
R7318 | T10031 | T10030 | acl | responsive,elements |
R7319 | T10032 | T10031 | prep | to,responsive |
R7320 | T10033 | T10032 | pobj | LPS,to |
R7321 | T10034 | T10027 | prep | in,investigate |
R7322 | T10035 | T10039 | det | the,region |
R7323 | T10036 | T10037 | nummod | 5,′ |
R7324 | T10037 | T10039 | compound | ′,region |
R7325 | T10038 | T10039 | compound | flanking,region |
R7326 | T10039 | T10034 | pobj | region,in |
R7327 | T10040 | T10039 | prep | of,region |
R7328 | T10041 | T10044 | det | the,gene |
R7329 | T10042 | T10044 | compound | murine,gene |
R7330 | T10043 | T10044 | compound | SerpinB2,gene |
R7331 | T10044 | T10040 | pobj | gene,of |
R7332 | T10045 | T10047 | punct | ",",− |
R7333 | T10046 | T10047 | nsubj | nucleotides,− |
R7334 | T10047 | T10065 | ccomp | −,cloned |
R7335 | T10048 | T10065 | nsubjpass | 4480,cloned |
R7336 | T10049 | T10048 | prep | to,4480 |
R7337 | T10050 | T10049 | pobj | +92,to |
R7338 | T10051 | T10048 | cc | and,4480 |
R7339 | T10052 | T10053 | det | a,series |
R7340 | T10053 | T10065 | nsubjpass | series,cloned |
R7341 | T10054 | T10053 | prep | of,series |
R7342 | T10055 | T10057 | amod | generated,mutants |
R7343 | T10056 | T10057 | compound | deletion,mutants |
R7344 | T10057 | T10054 | pobj | mutants,of |
R7345 | T10058 | T10057 | prep | of,mutants |
R7346 | T10059 | T10063 | det | the,region |
R7347 | T10060 | T10061 | nummod | 5,′ |
R7348 | T10061 | T10063 | amod | ′,region |
R7349 | T10062 | T10063 | amod | flanking,region |
R7350 | T10063 | T10058 | pobj | region,of |
R7351 | T10064 | T10065 | auxpass | were,cloned |
R7352 | T10065 | T10065 | ROOT | cloned,cloned |
R7353 | T10066 | T10065 | dobj | upstream,cloned |
R7354 | T10067 | T10066 | prep | of,upstream |
R7355 | T10068 | T10073 | det | a,gene |
R7356 | T10069 | T10073 | amod | promoter-less,gene |
R7357 | T10070 | T10073 | amod | firefly,gene |
R7358 | T10071 | T10073 | compound | luciferase,gene |
R7359 | T10072 | T10073 | compound | reporter,gene |
R7360 | T10073 | T10067 | pobj | gene,of |
R7361 | T10074 | T10076 | punct | (,Basic |
R7362 | T10075 | T10076 | compound | pGL3,Basic |
R7363 | T10076 | T10073 | appos | Basic,gene |
R7364 | T10077 | T10065 | punct | ),cloned |
R7365 | T10078 | T10065 | punct | (,cloned |
R7366 | T10079 | T10080 | compound | Fig.,2A |
R7367 | T10080 | T10065 | appos | 2A,cloned |
R7368 | T10081 | T10065 | punct | ),cloned |
R7370 | T10083 | T10084 | det | The,reporter |
R7371 | T10084 | T10085 | compound | reporter,constructs |
R7372 | T10085 | T10086 | nsubj | constructs,were |
R7373 | T10086 | T10089 | auxpass | were,transfected |
R7374 | T10087 | T10089 | advmod | then,transfected |
R7375 | T10088 | T10089 | advmod | transiently,transfected |
R7376 | T10089 | T10089 | ROOT | transfected,transfected |
R7377 | T10090 | T10089 | prep | into,transfected |
R7378 | T10091 | T10092 | compound | sub-confluent,RAW264 |
R7379 | T10092 | T10090 | pobj | RAW264,into |
R7380 | T10093 | T10092 | nummod | .7,RAW264 |
R7381 | T10094 | T10090 | pobj | macrophages,into |
R7382 | T10095 | T10089 | cc | and,transfected |
R7383 | T10096 | T10089 | conj | assayed,transfected |
R7384 | T10097 | T10096 | prep | for,assayed |
R7385 | T10098 | T10099 | compound | luciferase,activity |
R7386 | T10099 | T10097 | pobj | activity,for |
R7387 | T10100 | T10099 | prep | in,activity |
R7388 | T10101 | T10102 | det | the,presence |
R7389 | T10102 | T10100 | pobj | presence,in |
R7390 | T10103 | T10102 | cc | and,presence |
R7391 | T10104 | T10102 | conj | absence,presence |
R7392 | T10105 | T10104 | prep | of,absence |
R7393 | T10106 | T10105 | pobj | LPS,of |
R7394 | T10107 | T10106 | cc | or,LPS |
R7395 | T10108 | T10106 | conj | PMA,LPS |
R7396 | T10109 | T10096 | punct | ",",assayed |
R7397 | T10110 | T10096 | prep | for,assayed |
R7398 | T10111 | T10110 | pobj | comparison,for |
R7399 | T10112 | T10089 | punct | .,transfected |
R7400 | T10113 | T10116 | amod | PMA-induced,regulation |
R7401 | T10114 | T10116 | compound | SerpinB2,regulation |
R7402 | T10115 | T10116 | compound | gene,regulation |
R7403 | T10116 | T10120 | nsubjpass | regulation,studied |
R7404 | T10117 | T10120 | aux | has,studied |
R7405 | T10118 | T10120 | auxpass | been,studied |
R7406 | T10119 | T10120 | advmod | extensively,studied |
R7407 | T10120 | T10120 | ROOT | studied,studied |
R7408 | T10121 | T10120 | prep | in,studied |
R7409 | T10122 | T10124 | amod | human,cell |
R7410 | T10123 | T10124 | compound | macrophage,cell |
R7411 | T10124 | T10125 | compound | cell,lines |
R7412 | T10125 | T10121 | pobj | lines,in |
R7413 | T10126 | T10128 | nmod | [,] |
R7414 | T10127 | T10128 | nummod | 45,] |
R7415 | T10128 | T10125 | appos | ],lines |
R7416 | T10129 | T10131 | nmod | [,] |
R7417 | T10130 | T10131 | nummod | 47,] |
R7418 | T10131 | T10128 | conj | ],] |
R7419 | T10132 | T10131 | punct | ",",] |
R7420 | T10133 | T10120 | cc | and,studied |
R7421 | T10134 | T10136 | aux | has,shown |
R7422 | T10135 | T10136 | auxpass | been,shown |
R7423 | T10136 | T10120 | conj | shown,studied |
R7424 | T10137 | T10138 | aux | to,occur |
R7425 | T10138 | T10136 | xcomp | occur,shown |
R7426 | T10139 | T10138 | prep | through,occur |
R7427 | T10140 | T10146 | amod | several,elements |
R7428 | T10141 | T10146 | amod | proximal,elements |
R7429 | T10142 | T10141 | cc | and,proximal |
R7430 | T10143 | T10141 | conj | distal,proximal |
R7431 | T10144 | T10146 | amod | AP-1,elements |
R7432 | T10145 | T10146 | amod | responsive,elements |
R7433 | T10146 | T10139 | pobj | elements,through |
R7434 | T10147 | T10149 | nmod | [,] |
R7435 | T10148 | T10149 | nummod | 30,] |
R7436 | T10149 | T10146 | appos | ],elements |
R7437 | T10150 | T10149 | punct | ;,] |
R7438 | T10151 | T10153 | nmod | [,] |
R7439 | T10152 | T10153 | nummod | 37,] |
R7440 | T10153 | T10149 | conj | ],] |
R7441 | T10154 | T10149 | punct | ;,] |
R7442 | T10155 | T10149 | conj | [,] |
R7443 | T10156 | T10157 | nummod | 47,] |
R7444 | T10157 | T10149 | conj | ],] |
R7445 | T10158 | T10146 | appos | [,elements |
R7446 | T10159 | T10160 | nummod | 51,] |
R7447 | T10160 | T10158 | appos | ],[ |
R7448 | T10161 | T10120 | punct | .,studied |
R7449 | T10162 | T10163 | mark | As,shown |
R7450 | T10163 | T10179 | advcl | shown,directs |
R7451 | T10164 | T10163 | prep | in,shown |
R7452 | T10165 | T10166 | compound | Fig.,2B |
R7453 | T10166 | T10164 | pobj | 2B,in |
R7454 | T10167 | T10166 | punct | ",",2B |
R7455 | T10168 | T10173 | det | the,region |
R7456 | T10169 | T10173 | nummod | SerpinB2,region |
R7457 | T10170 | T10171 | nummod | 5,′ |
R7458 | T10171 | T10173 | amod | ′,region |
R7459 | T10172 | T10173 | amod | flanking,region |
R7460 | T10173 | T10166 | appos | region,2B |
R7461 | T10174 | T10163 | prep | from,shown |
R7462 | T10175 | T10178 | nummod | −,+92 |
R7463 | T10176 | T10178 | nummod | 4480,+92 |
R7464 | T10177 | T10178 | quantmod | to,+92 |
R7465 | T10178 | T10174 | pobj | +92,from |
R7466 | T10179 | T10179 | ROOT | directs,directs |
R7467 | T10180 | T10181 | det | both,PMA |
R7468 | T10181 | T10179 | dobj | PMA,directs |
R7469 | T10182 | T10181 | punct | -,PMA |
R7470 | T10183 | T10181 | cc | and,PMA |
R7471 | T10184 | T10185 | compound | LPS-inducible,transcription |
R7472 | T10185 | T10181 | conj | transcription,PMA |
R7473 | T10186 | T10185 | punct | ",",transcription |
R7474 | T10187 | T10188 | advmod | approximately,2-fold |
R7475 | T10188 | T10185 | conj | 2-fold,transcription |
R7476 | T10189 | T10188 | cc | and,2-fold |
R7477 | T10190 | T10188 | conj | 7-fold,2-fold |
R7478 | T10191 | T10190 | punct | ",",7-fold |
R7479 | T10192 | T10190 | conj | respectively,7-fold |
R7480 | T10193 | T10179 | punct | .,directs |
R7481 | T10194 | T10194 | ROOT | Deletion,Deletion |
R7482 | T10195 | T10194 | prep | of,Deletion |
R7483 | T10196 | T10199 | det | the,promoter |
R7484 | T10197 | T10199 | compound | murine,promoter |
R7485 | T10198 | T10199 | compound | SerpinB2,promoter |
R7486 | T10199 | T10195 | pobj | promoter,of |
R7487 | T10200 | T10194 | prep | from,Deletion |
R7488 | T10201 | T10202 | nummod | −,1686 |
R7489 | T10202 | T10200 | pobj | 1686,from |
R7490 | T10203 | T10194 | prep | to,Deletion |
R7491 | T10204 | T10203 | pobj | −,to |
R7492 | T10205 | T10207 | nummod | 1341,LPS-inducibility |
R7493 | T10206 | T10207 | amod | increased,LPS-inducibility |
R7494 | T10207 | T10203 | pobj | LPS-inducibility,to |
R7495 | T10208 | T10194 | prep | to,Deletion |
R7496 | T10209 | T10210 | advmod | approximately,16-fold |
R7497 | T10210 | T10208 | pobj | 16-fold,to |
R7498 | T10211 | T10194 | punct | ",",Deletion |
R7499 | T10212 | T10194 | acl | indicating,Deletion |
R7500 | T10213 | T10214 | det | the,presence |
R7501 | T10214 | T10212 | dobj | presence,indicating |
R7502 | T10215 | T10214 | prep | of,presence |
R7503 | T10216 | T10218 | det | a,element |
R7504 | T10217 | T10218 | compound | silencer,element |
R7505 | T10218 | T10215 | pobj | element,of |
R7506 | T10219 | T10218 | prep | in,element |
R7507 | T10220 | T10221 | det | this,region |
R7508 | T10221 | T10219 | pobj | region,in |
R7509 | T10222 | T10194 | punct | .,Deletion |
R7510 | T10223 | T10224 | amod | Further,deletion |
R7511 | T10224 | T10228 | nsubj | deletion,abolished |
R7512 | T10225 | T10224 | prep | beyond,deletion |
R7513 | T10226 | T10225 | pobj | −,beyond |
R7514 | T10227 | T10228 | nsubj | 539,abolished |
R7515 | T10228 | T10265 | ccomp | abolished,is |
R7516 | T10229 | T10230 | det | the,LPS-response |
R7517 | T10230 | T10228 | dobj | LPS-response,abolished |
R7518 | T10231 | T10230 | prep | of,LPS-response |
R7519 | T10232 | T10233 | det | the,promoter |
R7520 | T10233 | T10231 | pobj | promoter,of |
R7521 | T10234 | T10228 | punct | ",",abolished |
R7522 | T10235 | T10228 | advcl | indicating,abolished |
R7523 | T10236 | T10237 | det | the,presence |
R7524 | T10237 | T10235 | dobj | presence,indicating |
R7525 | T10238 | T10237 | prep | of,presence |
R7526 | T10239 | T10243 | det | an,element |
R7527 | T10240 | T10243 | amod | essential,element |
R7528 | T10241 | T10243 | compound | LPS,element |
R7529 | T10242 | T10243 | compound | response,element |
R7530 | T10243 | T10238 | pobj | element,of |
R7531 | T10244 | T10243 | prep | in,element |
R7532 | T10245 | T10246 | det | the,region |
R7533 | T10246 | T10244 | pobj | region,in |
R7534 | T10247 | T10237 | prep | between,presence |
R7535 | T10248 | T10249 | nummod | −,539 |
R7536 | T10249 | T10247 | pobj | 539,between |
R7537 | T10250 | T10249 | cc | and,539 |
R7538 | T10251 | T10249 | conj | −,539 |
R7539 | T10252 | T10249 | conj | 189,539 |
R7540 | T10253 | T10265 | punct | ;,is |
R7541 | T10254 | T10265 | advmod | however,is |
R7542 | T10255 | T10265 | punct | ",",is |
R7543 | T10256 | T10257 | det | the,response |
R7544 | T10257 | T10265 | nsubj | response,is |
R7545 | T10258 | T10257 | prep | of,response |
R7546 | T10259 | T10262 | det | the,promoter |
R7547 | T10260 | T10262 | compound | murine,promoter |
R7548 | T10261 | T10262 | compound | SerpinB2,promoter |
R7549 | T10262 | T10258 | pobj | promoter,of |
R7550 | T10263 | T10257 | prep | to,response |
R7551 | T10264 | T10263 | pobj | PMA,to |
R7552 | T10265 | T10265 | ROOT | is,is |
R7553 | T10266 | T10267 | advmod | less,affected |
R7554 | T10267 | T10265 | acomp | affected,is |
R7555 | T10268 | T10267 | prep | by,affected |
R7556 | T10269 | T10270 | det | this,deletion |
R7557 | T10270 | T10268 | pobj | deletion,by |
R7558 | T10271 | T10265 | punct | .,is |
R7559 | T10272 | T10284 | mark | While,eliminated |
R7560 | T10273 | T10284 | nsubj | deletion,eliminated |
R7561 | T10274 | T10273 | prep | of,deletion |
R7562 | T10275 | T10277 | det | the,promoter |
R7563 | T10276 | T10277 | compound | SerpinB2,promoter |
R7564 | T10277 | T10274 | pobj | promoter,of |
R7565 | T10278 | T10273 | prep | from,deletion |
R7566 | T10279 | T10284 | dep | −,eliminated |
R7567 | T10280 | T10284 | dep | 189,eliminated |
R7568 | T10281 | T10284 | prep | to,eliminated |
R7569 | T10282 | T10281 | pobj | −,to |
R7570 | T10283 | T10284 | nsubj | 87,eliminated |
R7571 | T10284 | T10302 | advcl | eliminated,was |
R7572 | T10285 | T10287 | det | the,response |
R7573 | T10286 | T10287 | compound | LPS,response |
R7574 | T10287 | T10284 | dobj | response,eliminated |
R7575 | T10288 | T10287 | cc | and,response |
R7576 | T10289 | T10290 | advmod | marginally,reduced |
R7577 | T10290 | T10284 | conj | reduced,eliminated |
R7578 | T10291 | T10293 | det | the,response |
R7579 | T10292 | T10293 | compound | PMA,response |
R7580 | T10293 | T10290 | dobj | response,reduced |
R7581 | T10294 | T10301 | punct | ",",construct |
R7582 | T10295 | T10300 | det | the,promoter |
R7583 | T10296 | T10300 | nmod | −,promoter |
R7584 | T10297 | T10298 | nummod | 87,murine |
R7585 | T10298 | T10300 | compound | murine,promoter |
R7586 | T10299 | T10300 | compound | SerpinB2,promoter |
R7587 | T10300 | T10301 | compound | promoter,construct |
R7588 | T10301 | T10302 | nsubj | construct,was |
R7589 | T10302 | T10302 | ROOT | was,was |
R7590 | T10303 | T10302 | advmod | still,was |
R7591 | T10304 | T10305 | advmod | partially,responsive |
R7592 | T10305 | T10302 | acomp | responsive,was |
R7593 | T10306 | T10305 | prep | to,responsive |
R7594 | T10307 | T10306 | pobj | PMA,to |
R7595 | T10308 | T10302 | punct | ",",was |
R7596 | T10309 | T10302 | advcl | indicating,was |
R7597 | T10310 | T10324 | mark | that,lie |
R7598 | T10311 | T10312 | amod | cis-acting,elements |
R7599 | T10312 | T10324 | nsubj | elements,lie |
R7600 | T10313 | T10312 | acl | mediating,elements |
R7601 | T10314 | T10315 | det | the,response |
R7602 | T10315 | T10313 | dobj | response,mediating |
R7603 | T10316 | T10315 | prep | of,response |
R7604 | T10317 | T10320 | det | the,promoter |
R7605 | T10318 | T10320 | amod | murine,promoter |
R7606 | T10319 | T10320 | compound | SerpinB2,promoter |
R7607 | T10320 | T10316 | pobj | promoter,of |
R7608 | T10321 | T10324 | aux | to,lie |
R7609 | T10322 | T10321 | pobj | PMA,to |
R7610 | T10323 | T10324 | advmod | also,lie |
R7611 | T10324 | T10309 | ccomp | lie,indicating |
R7612 | T10325 | T10324 | dobj | downstream,lie |
R7613 | T10326 | T10325 | prep | of,downstream |
R7614 | T10327 | T10328 | compound | nucleotide,− |
R7615 | T10328 | T10326 | pobj | −,of |
R7616 | T10329 | T10328 | nummod | 87,− |
R7617 | T10330 | T10302 | punct | .,was |
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
23472114-1354603-87899177 | 601-603 | 1354603 | denotes | 45 |
23472114-8916932-87899178 | 701-703 | 8916932 | denotes | 30 |
23472114-8262378-87899179 | 718-720 | 8262378 | denotes | 51 |
T40363 | 601-603 | 1354603 | denotes | 45 |
T4480 | 701-703 | 8916932 | denotes | 30 |
T43659 | 718-720 | 8262378 | denotes | 51 |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9723 | 830-843 | NN | denotes | transcription |
T9722 | 816-829 | JJ | denotes | LPS-inducible |
T9721 | 812-815 | CC | denotes | and |
T9720 | 807-811 | NN | denotes | PMA- |
T9719 | 802-806 | CC | denotes | both |
T9718 | 794-801 | NN | denotes | directs |
T9717 | 790-793 | CD | denotes | +92 |
T9716 | 787-789 | TO | denotes | to |
T9715 | 781-786 | CD | denotes | −4480 |
T9714 | 776-780 | IN | denotes | from |
T9713 | 769-775 | NN | denotes | region |
T9712 | 760-768 | NN | denotes | flanking |
T9711 | 757-759 | NN | denotes | 5′ |
T9710 | 748-756 | NN | denotes | SerpinB2 |
T9709 | 744-747 | DT | denotes | the |
T9708 | 742-743 | -COMMA- | denotes | , |
T9707 | 740-742 | NN | denotes | 2B |
T9706 | 735-739 | NNP | denotes | Fig. |
T9705 | 732-734 | IN | denotes | in |
T9704 | 726-731 | VB | denotes | shown |
T9703 | 723-725 | IN | denotes | As |
T9702 | 720-721 | -RRB- | denotes | ] |
T9701 | 718-720 | CD | denotes | 51 |
T9700 | 717-718 | -LRB- | denotes | [ |
T9699 | 716-717 | CD | denotes | – |
T9698 | 715-716 | -RRB- | denotes | ] |
T9697 | 713-715 | CD | denotes | 47 |
T9696 | 712-713 | -LRB- | denotes | [ |
T9695 | 710-711 | -COLON- | denotes | ; |
T9694 | 709-710 | -RRB- | denotes | ] |
T9693 | 707-709 | CD | denotes | 37 |
T9692 | 706-707 | -LRB- | denotes | [ |
T9691 | 704-705 | -COLON- | denotes | ; |
T9690 | 703-704 | -RRB- | denotes | ] |
T9689 | 701-703 | CD | denotes | 30 |
T9688 | 700-701 | -LRB- | denotes | [ |
T9687 | 691-699 | NN | denotes | elements |
T9686 | 680-690 | JJ | denotes | responsive |
T9685 | 675-679 | NN | denotes | AP-1 |
T9684 | 668-674 | JJ | denotes | distal |
T9683 | 664-667 | CC | denotes | and |
T9682 | 655-663 | JJ | denotes | proximal |
T9681 | 647-654 | JJ | denotes | several |
T9680 | 639-646 | IN | denotes | through |
T9679 | 633-638 | VB | denotes | occur |
T9678 | 630-632 | TO | denotes | to |
T9677 | 624-629 | VB | denotes | shown |
T9676 | 619-623 | VB | denotes | been |
T9675 | 615-618 | VB | denotes | has |
T9674 | 611-614 | CC | denotes | and |
T9673 | 609-610 | -COMMA- | denotes | , |
T9672 | 608-609 | -RRB- | denotes | ] |
T9671 | 606-608 | CD | denotes | 47 |
T9670 | 605-606 | -LRB- | denotes | [ |
T9669 | 604-605 | CD | denotes | – |
T9668 | 603-604 | -RRB- | denotes | ] |
T9667 | 601-603 | CD | denotes | 45 |
T9666 | 600-601 | -LRB- | denotes | [ |
T9665 | 594-599 | NN | denotes | lines |
T9664 | 589-593 | NN | denotes | cell |
T9663 | 578-588 | NN | denotes | macrophage |
T9662 | 572-577 | JJ | denotes | human |
T9661 | 569-571 | IN | denotes | in |
T9660 | 561-568 | VB | denotes | studied |
T9659 | 549-560 | RB | denotes | extensively |
T9658 | 544-548 | VB | denotes | been |
T9657 | 540-543 | VB | denotes | has |
T9656 | 529-539 | NN | denotes | regulation |
T9655 | 524-528 | NN | denotes | gene |
T9654 | 515-523 | NN | denotes | SerpinB2 |
T9653 | 503-514 | JJ | denotes | PMA-induced |
T9652 | 491-501 | NN | denotes | comparison |
T9651 | 487-490 | IN | denotes | for |
T9650 | 485-486 | -COMMA- | denotes | , |
T9649 | 482-485 | NN | denotes | PMA |
T9648 | 479-481 | CC | denotes | or |
T9647 | 475-478 | NN | denotes | LPS |
T9646 | 472-474 | IN | denotes | of |
T9645 | 464-471 | NN | denotes | absence |
T9644 | 460-463 | CC | denotes | and |
T9643 | 451-459 | NN | denotes | presence |
T9642 | 447-450 | DT | denotes | the |
T9641 | 444-446 | IN | denotes | in |
T9640 | 435-443 | NN | denotes | activity |
T9639 | 424-434 | NN | denotes | luciferase |
T9638 | 420-423 | IN | denotes | for |
T9637 | 412-419 | VB | denotes | assayed |
T9636 | 408-411 | CC | denotes | and |
T9635 | 396-407 | NN | denotes | macrophages |
T9634 | 387-395 | NN | denotes | RAW264.7 |
T9633 | 373-386 | JJ | denotes | sub-confluent |
T9632 | 368-372 | IN | denotes | into |
T9631 | 356-367 | VB | denotes | transfected |
T9630 | 344-355 | RB | denotes | transiently |
T9629 | 339-343 | RB | denotes | then |
T9628 | 334-338 | VB | denotes | were |
T9627 | 323-333 | NN | denotes | constructs |
T9626 | 314-322 | NN | denotes | reporter |
T9625 | 310-313 | DT | denotes | The |
T9624 | 307-308 | -RRB- | denotes | ) |
T9623 | 305-307 | NN | denotes | 2A |
T9622 | 300-304 | NN | denotes | Fig. |
T9621 | 299-300 | -LRB- | denotes | ( |
T9620 | 297-298 | -RRB- | denotes | ) |
T9619 | 292-297 | JJ | denotes | Basic |
T9618 | 287-291 | NN | denotes | pGL3 |
T9617 | 286-287 | -LRB- | denotes | ( |
T9616 | 281-285 | NN | denotes | gene |
T9615 | 272-280 | NN | denotes | reporter |
T9614 | 261-271 | NN | denotes | luciferase |
T9613 | 253-260 | NN | denotes | firefly |
T9612 | 239-252 | JJ | denotes | promoter-less |
T9611 | 237-238 | DT | denotes | a |
T9610 | 234-236 | IN | denotes | of |
T9609 | 225-233 | RB | denotes | upstream |
T9608 | 218-224 | VB | denotes | cloned |
T9607 | 213-217 | VB | denotes | were |
T9606 | 206-212 | NN | denotes | region |
T9605 | 197-205 | NN | denotes | flanking |
T9604 | 194-196 | NN | denotes | 5′ |
T9603 | 190-193 | DT | denotes | the |
T9602 | 187-189 | IN | denotes | of |
T9601 | 179-186 | NN | denotes | mutants |
T9600 | 170-178 | NN | denotes | deletion |
T9599 | 160-169 | VB | denotes | generated |
T9598 | 157-159 | IN | denotes | of |
T9597 | 150-156 | NN | denotes | series |
T9596 | 148-149 | DT | denotes | a |
T9595 | 144-147 | CC | denotes | and |
T9594 | 140-143 | CD | denotes | +92 |
T9593 | 137-139 | TO | denotes | to |
T9592 | 131-136 | CD | denotes | −4480 |
T9591 | 119-130 | NN | denotes | nucleotides |
T9590 | 117-118 | -COMMA- | denotes | , |
T9589 | 113-117 | NN | denotes | gene |
T9588 | 104-112 | NN | denotes | SerpinB2 |
T9587 | 97-103 | JJ | denotes | murine |
T9586 | 93-96 | DT | denotes | the |
T9585 | 90-92 | IN | denotes | of |
T9584 | 83-89 | NN | denotes | region |
T9583 | 74-82 | NN | denotes | flanking |
T9582 | 71-73 | CD | denotes | 5′ |
T9581 | 67-70 | DT | denotes | the |
T9580 | 64-66 | IN | denotes | in |
T9579 | 60-63 | NN | denotes | LPS |
T9578 | 57-59 | TO | denotes | to |
T9577 | 46-56 | JJ | denotes | responsive |
T9576 | 37-45 | NN | denotes | elements |
T9575 | 26-36 | JJ | denotes | regulatory |
T9574 | 15-25 | JJ | denotes | cis-acting |
T9573 | 3-14 | VB | denotes | investigate |
T9572 | 0-2 | TO | denotes | To |
T9855 | 1675-1678 | CD | denotes | −87 |
T9854 | 1664-1674 | NN | denotes | nucleotide |
T9853 | 1661-1663 | IN | denotes | of |
T9852 | 1650-1660 | JJ | denotes | downstream |
T9851 | 1646-1649 | VB | denotes | lie |
T9850 | 1641-1645 | RB | denotes | also |
T9849 | 1637-1640 | NN | denotes | PMA |
T9848 | 1634-1636 | TO | denotes | to |
T9847 | 1625-1633 | NN | denotes | promoter |
T9846 | 1616-1624 | NN | denotes | SerpinB2 |
T9845 | 1609-1615 | JJ | denotes | murine |
T9844 | 1605-1608 | DT | denotes | the |
T9843 | 1602-1604 | IN | denotes | of |
T9842 | 1593-1601 | NN | denotes | response |
T9841 | 1589-1592 | DT | denotes | the |
T9840 | 1579-1588 | VB | denotes | mediating |
T9839 | 1570-1578 | NN | denotes | elements |
T9838 | 1559-1569 | JJ | denotes | cis-acting |
T9837 | 1554-1558 | IN | denotes | that |
T9836 | 1543-1553 | VB | denotes | indicating |
T9835 | 1541-1542 | -COMMA- | denotes | , |
T9834 | 1538-1541 | NN | denotes | PMA |
T9833 | 1535-1537 | TO | denotes | to |
T9832 | 1524-1534 | JJ | denotes | responsive |
T9831 | 1514-1523 | RB | denotes | partially |
T9830 | 1508-1513 | RB | denotes | still |
T9829 | 1504-1507 | VB | denotes | was |
T9828 | 1494-1503 | NN | denotes | construct |
T9827 | 1485-1493 | NN | denotes | promoter |
T9826 | 1476-1484 | NN | denotes | SerpinB2 |
T9825 | 1469-1475 | JJ | denotes | murine |
T9824 | 1465-1468 | CD | denotes | −87 |
T9823 | 1461-1464 | DT | denotes | the |
T9822 | 1459-1460 | -COMMA- | denotes | , |
T9821 | 1451-1459 | NN | denotes | response |
T9820 | 1447-1450 | NN | denotes | PMA |
T9819 | 1443-1446 | DT | denotes | the |
T9818 | 1435-1442 | VB | denotes | reduced |
T9817 | 1424-1434 | RB | denotes | marginally |
T9816 | 1420-1423 | CC | denotes | and |
T9815 | 1411-1419 | NN | denotes | response |
T9814 | 1407-1410 | NN | denotes | LPS |
T9813 | 1403-1406 | DT | denotes | the |
T9812 | 1392-1402 | VB | denotes | eliminated |
T9811 | 1388-1391 | CD | denotes | −87 |
T9810 | 1385-1387 | TO | denotes | to |
T9809 | 1380-1384 | CD | denotes | −189 |
T9808 | 1375-1379 | IN | denotes | from |
T9807 | 1366-1374 | NN | denotes | promoter |
T9806 | 1357-1365 | NN | denotes | SerpinB2 |
T9805 | 1353-1356 | DT | denotes | the |
T9804 | 1350-1352 | IN | denotes | of |
T9803 | 1341-1349 | NN | denotes | deletion |
T9802 | 1335-1340 | IN | denotes | While |
T9801 | 1325-1333 | NN | denotes | deletion |
T9800 | 1320-1324 | DT | denotes | this |
T9799 | 1317-1319 | IN | denotes | by |
T9798 | 1308-1316 | VB | denotes | affected |
T9797 | 1303-1307 | RB | denotes | less |
T9796 | 1300-1302 | VB | denotes | is |
T9795 | 1296-1299 | NN | denotes | PMA |
T9794 | 1293-1295 | TO | denotes | to |
T9793 | 1284-1292 | NN | denotes | promoter |
T9792 | 1275-1283 | NN | denotes | SerpinB2 |
T9791 | 1268-1274 | JJ | denotes | murine |
T9790 | 1264-1267 | DT | denotes | the |
T9789 | 1261-1263 | IN | denotes | of |
T9788 | 1252-1260 | NN | denotes | response |
T9787 | 1248-1251 | DT | denotes | the |
T9786 | 1246-1247 | -COMMA- | denotes | , |
T9785 | 1239-1246 | RB | denotes | however |
T9784 | 1237-1238 | -COLON- | denotes | ; |
T9783 | 1233-1237 | CD | denotes | −189 |
T9782 | 1229-1232 | CC | denotes | and |
T9781 | 1224-1228 | CD | denotes | −539 |
T9780 | 1216-1223 | IN | denotes | between |
T9779 | 1209-1215 | NN | denotes | region |
T9778 | 1205-1208 | DT | denotes | the |
T9777 | 1202-1204 | IN | denotes | in |
T9776 | 1194-1201 | NN | denotes | element |
T9775 | 1185-1193 | NN | denotes | response |
T9774 | 1181-1184 | NN | denotes | LPS |
T9773 | 1171-1180 | JJ | denotes | essential |
T9772 | 1168-1170 | DT | denotes | an |
T9771 | 1165-1167 | IN | denotes | of |
T9770 | 1156-1164 | NN | denotes | presence |
T9769 | 1152-1155 | DT | denotes | the |
T9768 | 1141-1151 | VB | denotes | indicating |
T9767 | 1139-1140 | -COMMA- | denotes | , |
T9766 | 1131-1139 | NN | denotes | promoter |
T9765 | 1127-1130 | DT | denotes | the |
T9764 | 1124-1126 | IN | denotes | of |
T9763 | 1111-1123 | NN | denotes | LPS-response |
T9762 | 1107-1110 | DT | denotes | the |
T9761 | 1097-1106 | VB | denotes | abolished |
T9760 | 1092-1096 | CD | denotes | −539 |
T9759 | 1085-1091 | IN | denotes | beyond |
T9758 | 1076-1084 | NN | denotes | deletion |
T9757 | 1068-1075 | JJ | denotes | Further |
T9756 | 1060-1066 | NN | denotes | region |
T9755 | 1055-1059 | DT | denotes | this |
T9754 | 1052-1054 | IN | denotes | in |
T9753 | 1044-1051 | NN | denotes | element |
T9752 | 1035-1043 | NN | denotes | silencer |
T9751 | 1033-1034 | DT | denotes | a |
T9750 | 1030-1032 | IN | denotes | of |
T9749 | 1021-1029 | NN | denotes | presence |
T9748 | 1017-1020 | DT | denotes | the |
T9747 | 1006-1016 | VB | denotes | indicating |
T9746 | 1004-1005 | -COMMA- | denotes | , |
T9745 | 997-1004 | RB | denotes | 16-fold |
T9744 | 983-996 | RB | denotes | approximately |
T9743 | 980-982 | TO | denotes | to |
T9742 | 963-979 | NN | denotes | LPS-inducibility |
T9741 | 953-962 | VB | denotes | increased |
T9740 | 947-952 | CD | denotes | −1341 |
T9739 | 944-946 | TO | denotes | to |
T9738 | 938-943 | CD | denotes | −1686 |
T9737 | 933-937 | IN | denotes | from |
T9736 | 924-932 | NN | denotes | promoter |
T9735 | 915-923 | NN | denotes | SerpinB2 |
T9734 | 908-914 | JJ | denotes | murine |
T9733 | 904-907 | DT | denotes | the |
T9732 | 901-903 | IN | denotes | of |
T9731 | 892-900 | NN | denotes | Deletion |
T9730 | 878-890 | RB | denotes | respectively |
T9729 | 876-877 | -COMMA- | denotes | , |
T9728 | 870-876 | RB | denotes | 7-fold |
T9727 | 866-869 | CC | denotes | and |
T9726 | 859-865 | RB | denotes | 2-fold |
T9725 | 845-858 | RB | denotes | approximately |
T9724 | 843-844 | -COMMA- | denotes | , |
R6968 | T9573 | T9572 | arg1Of | investigate,To |
R6969 | T9576 | T9573 | arg2Of | elements,investigate |
R6970 | T9576 | T9574 | arg1Of | elements,cis-acting |
R6971 | T9576 | T9575 | arg1Of | elements,regulatory |
R6972 | T9576 | T9577 | arg1Of | elements,responsive |
R6973 | T9577 | T9578 | arg1Of | responsive,to |
R6974 | T9579 | T9578 | arg2Of | LPS,to |
R6975 | T9579 | T9580 | arg1Of | LPS,in |
R6976 | T9584 | T9580 | arg2Of | region,in |
R6977 | T9584 | T9581 | arg1Of | region,the |
R6978 | T9584 | T9582 | arg1Of | region,5′ |
R6979 | T9584 | T9583 | arg1Of | region,flanking |
R6980 | T9584 | T9585 | arg1Of | region,of |
R6981 | T9584 | T9590 | arg1Of | region,"," |
R6982 | T9589 | T9585 | arg2Of | gene,of |
R6983 | T9589 | T9586 | arg1Of | gene,the |
R6984 | T9589 | T9587 | arg1Of | gene,murine |
R6985 | T9589 | T9588 | arg1Of | gene,SerpinB2 |
R6986 | T9591 | T9590 | arg2Of | nucleotides,"," |
R6987 | T9591 | T9592 | arg1Of | nucleotides,−4480 |
R6988 | T9591 | T9593 | arg1Of | nucleotides,to |
R6989 | T9594 | T9595 | arg1Of | +92,and |
R6990 | T9595 | T9573 | arg1Of | and,investigate |
R6991 | T9595 | T9607 | arg1Of | and,were |
R6992 | T9595 | T9608 | arg2Of | and,cloned |
R6993 | T9597 | T9595 | arg2Of | series,and |
R6994 | T9597 | T9596 | arg1Of | series,a |
R6995 | T9597 | T9598 | arg1Of | series,of |
R6996 | T9601 | T9598 | arg2Of | mutants,of |
R6997 | T9601 | T9599 | arg2Of | mutants,generated |
R6998 | T9601 | T9600 | arg1Of | mutants,deletion |
R6999 | T9601 | T9602 | arg1Of | mutants,of |
R7000 | T9606 | T9602 | arg2Of | region,of |
R7001 | T9606 | T9603 | arg1Of | region,the |
R7002 | T9606 | T9604 | arg1Of | region,5′ |
R7003 | T9606 | T9605 | arg1Of | region,flanking |
R7004 | T9608 | T9572 | modOf | cloned,To |
R7005 | T9608 | T9607 | arg2Of | cloned,were |
R7006 | T9608 | T9609 | arg1Of | cloned,upstream |
R7007 | T9609 | T9610 | arg1Of | upstream,of |
R7008 | T9616 | T9610 | arg2Of | gene,of |
R7009 | T9616 | T9611 | arg1Of | gene,a |
R7010 | T9616 | T9612 | arg1Of | gene,promoter-less |
R7011 | T9616 | T9613 | arg1Of | gene,firefly |
R7012 | T9616 | T9614 | arg1Of | gene,luciferase |
R7013 | T9616 | T9615 | arg1Of | gene,reporter |
R7014 | T9616 | T9617 | arg1Of | gene,( |
R7015 | T9619 | T9618 | arg1Of | Basic,pGL3 |
R7016 | T9623 | T9617 | arg2Of | 2A,( |
R7017 | T9623 | T9619 | arg1Of | 2A,Basic |
R7018 | T9623 | T9620 | arg1Of | 2A,) |
R7019 | T9623 | T9621 | arg1Of | 2A,( |
R7020 | T9623 | T9622 | arg1Of | 2A,Fig. |
R7021 | T9624 | T9617 | arg3Of | ),( |
R7022 | T9627 | T9625 | arg1Of | constructs,The |
R7023 | T9627 | T9626 | arg1Of | constructs,reporter |
R7024 | T9627 | T9628 | arg1Of | constructs,were |
R7025 | T9627 | T9631 | arg2Of | constructs,transfected |
R7026 | T9627 | T9637 | arg2Of | constructs,assayed |
R7027 | T9631 | T9632 | arg1Of | transfected,into |
R7028 | T9631 | T9636 | arg1Of | transfected,and |
R7029 | T9635 | T9632 | arg2Of | macrophages,into |
R7030 | T9635 | T9633 | arg1Of | macrophages,sub-confluent |
R7031 | T9635 | T9634 | arg1Of | macrophages,RAW264.7 |
R7032 | T9636 | T9628 | arg2Of | and,were |
R7033 | T9636 | T9629 | arg1Of | and,then |
R7034 | T9636 | T9630 | arg1Of | and,transiently |
R7035 | T9636 | T9650 | arg1Of | and,"," |
R7036 | T9636 | T9651 | arg1Of | and,for |
R7037 | T9637 | T9636 | arg2Of | assayed,and |
R7038 | T9637 | T9638 | arg1Of | assayed,for |
R7039 | T9637 | T9641 | arg1Of | assayed,in |
R7040 | T9640 | T9638 | arg2Of | activity,for |
R7041 | T9640 | T9639 | arg1Of | activity,luciferase |
R7042 | T9643 | T9644 | arg1Of | presence,and |
R7043 | T9644 | T9641 | arg2Of | and,in |
R7044 | T9644 | T9642 | arg1Of | and,the |
R7045 | T9644 | T9646 | arg1Of | and,of |
R7046 | T9645 | T9644 | arg2Of | absence,and |
R7047 | T9647 | T9648 | arg1Of | LPS,or |
R7048 | T9648 | T9646 | arg2Of | or,of |
R7049 | T9649 | T9648 | arg2Of | PMA,or |
R7050 | T9652 | T9651 | arg2Of | comparison,for |
R7051 | T9656 | T9653 | arg1Of | regulation,PMA-induced |
R7052 | T9656 | T9654 | arg1Of | regulation,SerpinB2 |
R7053 | T9656 | T9655 | arg1Of | regulation,gene |
R7054 | T9656 | T9657 | arg1Of | regulation,has |
R7055 | T9656 | T9658 | arg1Of | regulation,been |
R7056 | T9656 | T9660 | arg2Of | regulation,studied |
R7057 | T9656 | T9675 | arg1Of | regulation,has |
R7058 | T9656 | T9676 | arg1Of | regulation,been |
R7059 | T9656 | T9677 | arg2Of | regulation,shown |
R7060 | T9656 | T9679 | arg1Of | regulation,occur |
R7061 | T9660 | T9657 | arg2Of | studied,has |
R7062 | T9660 | T9658 | arg2Of | studied,been |
R7063 | T9660 | T9659 | arg1Of | studied,extensively |
R7064 | T9660 | T9661 | arg1Of | studied,in |
R7065 | T9660 | T9674 | arg1Of | studied,and |
R7066 | T9665 | T9661 | arg2Of | lines,in |
R7067 | T9665 | T9662 | arg1Of | lines,human |
R7068 | T9665 | T9663 | arg1Of | lines,macrophage |
R7069 | T9665 | T9664 | arg1Of | lines,cell |
R7070 | T9665 | T9666 | arg1Of | lines,[ |
R7071 | T9665 | T9669 | arg1Of | lines,– |
R7072 | T9665 | T9670 | arg1Of | lines,[ |
R7073 | T9667 | T9666 | arg2Of | 45,[ |
R7074 | T9668 | T9666 | arg3Of | ],[ |
R7075 | T9671 | T9670 | arg2Of | 47,[ |
R7076 | T9672 | T9670 | arg3Of | ],[ |
R7077 | T9674 | T9673 | arg1Of | and,"," |
R7078 | T9674 | T9688 | arg1Of | and,[ |
R7079 | T9674 | T9691 | arg1Of | and,; |
R7080 | T9674 | T9692 | arg1Of | and,[ |
R7081 | T9674 | T9695 | arg1Of | and,; |
R7082 | T9674 | T9696 | arg1Of | and,[ |
R7083 | T9674 | T9699 | arg1Of | and,– |
R7084 | T9674 | T9700 | arg1Of | and,[ |
R7085 | T9677 | T9674 | arg2Of | shown,and |
R7086 | T9677 | T9675 | arg2Of | shown,has |
R7087 | T9677 | T9676 | arg2Of | shown,been |
R7088 | T9679 | T9677 | arg3Of | occur,shown |
R7089 | T9679 | T9678 | arg1Of | occur,to |
R7090 | T9679 | T9680 | arg1Of | occur,through |
R7091 | T9682 | T9683 | arg1Of | proximal,and |
R7092 | T9684 | T9683 | arg2Of | distal,and |
R7093 | T9687 | T9680 | arg2Of | elements,through |
R7094 | T9687 | T9681 | arg1Of | elements,several |
R7095 | T9687 | T9682 | arg1Of | elements,proximal |
R7096 | T9687 | T9684 | arg1Of | elements,distal |
R7097 | T9687 | T9685 | arg1Of | elements,AP-1 |
R7098 | T9687 | T9686 | arg1Of | elements,responsive |
R7099 | T9689 | T9688 | arg2Of | 30,[ |
R7100 | T9690 | T9688 | arg3Of | ],[ |
R7101 | T9693 | T9692 | arg2Of | 37,[ |
R7102 | T9694 | T9692 | arg3Of | ],[ |
R7103 | T9697 | T9696 | arg2Of | 47,[ |
R7104 | T9698 | T9696 | arg3Of | ],[ |
R7105 | T9701 | T9700 | arg2Of | 51,[ |
R7106 | T9702 | T9700 | arg3Of | ],[ |
R7107 | T9704 | T9703 | arg2Of | shown,As |
R7108 | T9704 | T9705 | arg1Of | shown,in |
R7109 | T9707 | T9705 | arg2Of | 2B,in |
R7110 | T9707 | T9706 | arg1Of | 2B,Fig. |
R7111 | T9713 | T9709 | arg1Of | region,the |
R7112 | T9713 | T9710 | arg1Of | region,SerpinB2 |
R7113 | T9713 | T9711 | arg1Of | region,5′ |
R7114 | T9713 | T9712 | arg1Of | region,flanking |
R7115 | T9713 | T9714 | arg1Of | region,from |
R7116 | T9713 | T9718 | arg1Of | region,directs |
R7117 | T9717 | T9714 | arg2Of | +92,from |
R7118 | T9717 | T9715 | arg1Of | +92,−4480 |
R7119 | T9717 | T9716 | arg1Of | +92,to |
R7120 | T9718 | T9703 | arg1Of | directs,As |
R7121 | T9718 | T9708 | arg1Of | directs,"," |
R7122 | T9718 | T9724 | arg1Of | directs,"," |
R7123 | T9718 | T9726 | arg1Of | directs,2-fold |
R7124 | T9718 | T9728 | arg1Of | directs,7-fold |
R7125 | T9718 | T9729 | arg1Of | directs,"," |
R7126 | T9718 | T9730 | arg1Of | directs,respectively |
R7127 | T9720 | T9721 | arg1Of | PMA-,and |
R7128 | T9721 | T9719 | arg1Of | and,both |
R7129 | T9722 | T9721 | arg2Of | LPS-inducible,and |
R7130 | T9723 | T9718 | arg2Of | transcription,directs |
R7131 | T9723 | T9720 | arg1Of | transcription,PMA- |
R7132 | T9723 | T9722 | arg1Of | transcription,LPS-inducible |
R7133 | T9726 | T9727 | arg1Of | 2-fold,and |
R7134 | T9727 | T9725 | arg1Of | and,approximately |
R7135 | T9728 | T9727 | arg2Of | 7-fold,and |
R7136 | T9731 | T9732 | arg1Of | Deletion,of |
R7137 | T9731 | T9737 | arg1Of | Deletion,from |
R7138 | T9731 | T9741 | arg1Of | Deletion,increased |
R7139 | T9736 | T9732 | arg2Of | promoter,of |
R7140 | T9736 | T9733 | arg1Of | promoter,the |
R7141 | T9736 | T9734 | arg1Of | promoter,murine |
R7142 | T9736 | T9735 | arg1Of | promoter,SerpinB2 |
R7143 | T9740 | T9737 | arg2Of | −1341,from |
R7144 | T9740 | T9738 | arg1Of | −1341,−1686 |
R7145 | T9740 | T9739 | arg1Of | −1341,to |
R7146 | T9741 | T9746 | arg1Of | increased,"," |
R7147 | T9741 | T9747 | modOf | increased,indicating |
R7148 | T9742 | T9741 | arg3Of | LPS-inducibility,increased |
R7149 | T9745 | T9741 | arg2Of | 16-fold,increased |
R7150 | T9745 | T9743 | arg2Of | 16-fold,to |
R7151 | T9745 | T9744 | arg1Of | 16-fold,approximately |
R7152 | T9749 | T9747 | arg2Of | presence,indicating |
R7153 | T9749 | T9748 | arg1Of | presence,the |
R7154 | T9749 | T9750 | arg1Of | presence,of |
R7155 | T9753 | T9750 | arg2Of | element,of |
R7156 | T9753 | T9751 | arg1Of | element,a |
R7157 | T9753 | T9752 | arg1Of | element,silencer |
R7158 | T9753 | T9754 | arg1Of | element,in |
R7159 | T9756 | T9754 | arg2Of | region,in |
R7160 | T9756 | T9755 | arg1Of | region,this |
R7161 | T9758 | T9757 | arg1Of | deletion,Further |
R7162 | T9758 | T9759 | arg1Of | deletion,beyond |
R7163 | T9758 | T9761 | arg1Of | deletion,abolished |
R7164 | T9760 | T9759 | arg2Of | −539,beyond |
R7165 | T9761 | T9767 | arg1Of | abolished,"," |
R7166 | T9761 | T9768 | modOf | abolished,indicating |
R7167 | T9761 | T9784 | arg1Of | abolished,; |
R7168 | T9763 | T9761 | arg2Of | LPS-response,abolished |
R7169 | T9763 | T9762 | arg1Of | LPS-response,the |
R7170 | T9763 | T9764 | arg1Of | LPS-response,of |
R7171 | T9766 | T9764 | arg2Of | promoter,of |
R7172 | T9766 | T9765 | arg1Of | promoter,the |
R7173 | T9770 | T9768 | arg2Of | presence,indicating |
R7174 | T9770 | T9769 | arg1Of | presence,the |
R7175 | T9770 | T9771 | arg1Of | presence,of |
R7176 | T9776 | T9771 | arg2Of | element,of |
R7177 | T9776 | T9772 | arg1Of | element,an |
R7178 | T9776 | T9773 | arg1Of | element,essential |
R7179 | T9776 | T9774 | arg1Of | element,LPS |
R7180 | T9776 | T9775 | arg1Of | element,response |
R7181 | T9776 | T9777 | arg1Of | element,in |
R7182 | T9779 | T9777 | arg2Of | region,in |
R7183 | T9779 | T9778 | arg1Of | region,the |
R7184 | T9779 | T9780 | arg1Of | region,between |
R7185 | T9781 | T9782 | arg1Of | −539,and |
R7186 | T9782 | T9780 | arg2Of | and,between |
R7187 | T9783 | T9782 | arg2Of | −189,and |
R7188 | T9788 | T9787 | arg1Of | response,the |
R7189 | T9788 | T9789 | arg1Of | response,of |
R7190 | T9788 | T9794 | arg1Of | response,to |
R7191 | T9788 | T9796 | arg1Of | response,is |
R7192 | T9788 | T9798 | arg1Of | response,affected |
R7193 | T9793 | T9789 | arg2Of | promoter,of |
R7194 | T9793 | T9790 | arg1Of | promoter,the |
R7195 | T9793 | T9791 | arg1Of | promoter,murine |
R7196 | T9793 | T9792 | arg1Of | promoter,SerpinB2 |
R7197 | T9795 | T9794 | arg2Of | PMA,to |
R7198 | T9796 | T9784 | arg2Of | is,; |
R7199 | T9796 | T9785 | arg1Of | is,however |
R7200 | T9796 | T9786 | arg1Of | is,"," |
R7201 | T9798 | T9796 | arg2Of | affected,is |
R7202 | T9798 | T9797 | arg1Of | affected,less |
R7203 | T9798 | T9799 | arg1Of | affected,by |
R7204 | T9801 | T9799 | arg2Of | deletion,by |
R7205 | T9801 | T9800 | arg1Of | deletion,this |
R7206 | T9803 | T9804 | arg1Of | deletion,of |
R7207 | T9803 | T9810 | arg1Of | deletion,to |
R7208 | T9803 | T9812 | arg1Of | deletion,eliminated |
R7209 | T9803 | T9818 | arg1Of | deletion,reduced |
R7210 | T9807 | T9804 | arg2Of | promoter,of |
R7211 | T9807 | T9805 | arg1Of | promoter,the |
R7212 | T9807 | T9806 | arg1Of | promoter,SerpinB2 |
R7213 | T9807 | T9808 | arg1Of | promoter,from |
R7214 | T9809 | T9808 | arg2Of | −189,from |
R7215 | T9811 | T9810 | arg2Of | −87,to |
R7216 | T9812 | T9816 | arg1Of | eliminated,and |
R7217 | T9815 | T9812 | arg2Of | response,eliminated |
R7218 | T9815 | T9813 | arg1Of | response,the |
R7219 | T9815 | T9814 | arg1Of | response,LPS |
R7220 | T9816 | T9802 | arg2Of | and,While |
R7221 | T9818 | T9816 | arg2Of | reduced,and |
R7222 | T9818 | T9817 | arg1Of | reduced,marginally |
R7223 | T9821 | T9818 | arg2Of | response,reduced |
R7224 | T9821 | T9819 | arg1Of | response,the |
R7225 | T9821 | T9820 | arg1Of | response,PMA |
R7226 | T9828 | T9823 | arg1Of | construct,the |
R7227 | T9828 | T9824 | arg1Of | construct,−87 |
R7228 | T9828 | T9825 | arg1Of | construct,murine |
R7229 | T9828 | T9826 | arg1Of | construct,SerpinB2 |
R7230 | T9828 | T9827 | arg1Of | construct,promoter |
R7231 | T9828 | T9829 | arg1Of | construct,was |
R7232 | T9828 | T9832 | arg1Of | construct,responsive |
R7233 | T9829 | T9802 | arg1Of | was,While |
R7234 | T9829 | T9822 | arg1Of | was,"," |
R7235 | T9829 | T9830 | arg1Of | was,still |
R7236 | T9829 | T9835 | arg1Of | was,"," |
R7237 | T9829 | T9836 | modOf | was,indicating |
R7238 | T9832 | T9829 | arg2Of | responsive,was |
R7239 | T9832 | T9831 | arg1Of | responsive,partially |
R7240 | T9832 | T9833 | arg1Of | responsive,to |
R7241 | T9834 | T9833 | arg2Of | PMA,to |
R7242 | T9839 | T9838 | arg1Of | elements,cis-acting |
R7243 | T9839 | T9840 | arg1Of | elements,mediating |
R7244 | T9839 | T9851 | arg1Of | elements,lie |
R7245 | T9842 | T9840 | arg2Of | response,mediating |
R7246 | T9842 | T9841 | arg1Of | response,the |
R7247 | T9842 | T9843 | arg1Of | response,of |
R7248 | T9842 | T9848 | arg1Of | response,to |
R7249 | T9847 | T9843 | arg2Of | promoter,of |
R7250 | T9847 | T9844 | arg1Of | promoter,the |
R7251 | T9847 | T9845 | arg1Of | promoter,murine |
R7252 | T9847 | T9846 | arg1Of | promoter,SerpinB2 |
R7253 | T9849 | T9848 | arg2Of | PMA,to |
R7254 | T9851 | T9836 | arg2Of | lie,indicating |
R7255 | T9851 | T9837 | arg1Of | lie,that |
R7256 | T9851 | T9850 | arg1Of | lie,also |
R7257 | T9851 | T9852 | arg1Of | lie,downstream |
R7258 | T9852 | T9853 | arg1Of | downstream,of |
R7259 | T9854 | T9853 | arg2Of | nucleotide,of |
R7260 | T9854 | T9855 | arg1Of | nucleotide,−87 |
bionlp-st-ge-2016-coref
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9525 | 1076-1084 | Antecedent | denotes | deletion |
T9524 | 1320-1333 | Anaphor | denotes | this deletion |
R6961 | T9524 | T9525 | boundBy | this deletion,deletion |
bionlp-st-ge-2016-test-proteins
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9536 | 1616-1624 | Protein | denotes | SerpinB2 |
T9535 | 1476-1484 | Protein | denotes | SerpinB2 |
T9534 | 1357-1365 | Protein | denotes | SerpinB2 |
T9533 | 1275-1283 | Protein | denotes | SerpinB2 |
T9532 | 915-923 | Protein | denotes | SerpinB2 |
T9531 | 748-756 | Protein | denotes | SerpinB2 |
T9530 | 515-523 | Protein | denotes | SerpinB2 |
T9529 | 424-434 | Protein | denotes | luciferase |
T9528 | 261-271 | Protein | denotes | luciferase |
T9527 | 104-112 | Protein | denotes | SerpinB2 |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9899 | 675-679 | http://www.uniprot.org/uniprot/P05412 | denotes | AP-1 |
T9898 | 424-434 | http://www.uniprot.org/uniprot/P08659 | denotes | luciferase |
T9897 | 261-271 | http://www.uniprot.org/uniprot/P08659 | denotes | luciferase |
T9896 | 1616-1624 | http://www.uniprot.org/uniprot/P05120 | denotes | SerpinB2 |
T9895 | 1476-1484 | http://www.uniprot.org/uniprot/P05120 | denotes | SerpinB2 |
T9894 | 1357-1365 | http://www.uniprot.org/uniprot/P05120 | denotes | SerpinB2 |
T9893 | 1275-1283 | http://www.uniprot.org/uniprot/P05120 | denotes | SerpinB2 |
T9892 | 915-923 | http://www.uniprot.org/uniprot/P05120 | denotes | SerpinB2 |
T9891 | 748-756 | http://www.uniprot.org/uniprot/P05120 | denotes | SerpinB2 |
T9890 | 515-523 | http://www.uniprot.org/uniprot/P05120 | denotes | SerpinB2 |
T9889 | 104-112 | http://www.uniprot.org/uniprot/P05120 | denotes | SerpinB2 |
UBERON-AE
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9468 | 549-560 | http://purl.obolibrary.org/obo/UBERON_2000106 | denotes | extensively |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9547 | 1447-1459 | http://purl.obolibrary.org/obo/GO_1904627 | denotes | PMA response |
T9546 | 1407-1419 | http://purl.obolibrary.org/obo/GO_0032496 | denotes | LPS response |
T9545 | 1181-1193 | http://purl.obolibrary.org/obo/GO_0032496 | denotes | LPS response |
T9544 | 1111-1123 | http://purl.obolibrary.org/obo/GO_0032496 | denotes | LPS-response |
T9543 | 830-843 | http://purl.obolibrary.org/obo/GO_0006351 | denotes | transcription |
T9542 | 529-539 | http://purl.obolibrary.org/obo/GO_0065007 | denotes | regulation |
T9541 | 424-443 | http://purl.obolibrary.org/obo/GO_0050397 | denotes | luciferase activity |
T9540 | 424-443 | http://purl.obolibrary.org/obo/GO_0050248 | denotes | luciferase activity |
T9539 | 424-443 | http://purl.obolibrary.org/obo/GO_0047712 | denotes | luciferase activity |
T9538 | 424-443 | http://purl.obolibrary.org/obo/GO_0047077 | denotes | luciferase activity |
T9537 | 424-443 | http://purl.obolibrary.org/obo/GO_0045289 | denotes | luciferase activity |
GO-MF
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9552 | 424-443 | http://purl.obolibrary.org/obo/GO_0050397 | denotes | luciferase activity |
T9551 | 424-443 | http://purl.obolibrary.org/obo/GO_0050248 | denotes | luciferase activity |
T9550 | 424-443 | http://purl.obolibrary.org/obo/GO_0047712 | denotes | luciferase activity |
T9549 | 424-443 | http://purl.obolibrary.org/obo/GO_0047077 | denotes | luciferase activity |
T9548 | 424-443 | http://purl.obolibrary.org/obo/GO_0045289 | denotes | luciferase activity |
GO-CC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9553 | 589-593 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9476 | 1335-1679 | Sentence | denotes | While deletion of the SerpinB2 promoter from −189 to −87 eliminated the LPS response and marginally reduced the PMA response, the −87 murine SerpinB2 promoter construct was still partially responsive to PMA, indicating that cis-acting elements mediating the response of the murine SerpinB2 promoter to PMA also lie downstream of nucleotide −87. |
T9475 | 1068-1334 | Sentence | denotes | Further deletion beyond −539 abolished the LPS-response of the promoter, indicating the presence of an essential LPS response element in the region between −539 and −189; however, the response of the murine SerpinB2 promoter to PMA is less affected by this deletion. |
T9474 | 892-1067 | Sentence | denotes | Deletion of the murine SerpinB2 promoter from −1686 to −1341 increased LPS-inducibility to approximately 16-fold, indicating the presence of a silencer element in this region. |
T9473 | 723-891 | Sentence | denotes | As shown in Fig. 2B, the SerpinB2 5′ flanking region from −4480 to +92 directs both PMA- and LPS-inducible transcription, approximately 2-fold and 7-fold, respectively. |
T9472 | 503-722 | Sentence | denotes | PMA-induced SerpinB2 gene regulation has been extensively studied in human macrophage cell lines [45]–[47], and has been shown to occur through several proximal and distal AP-1 responsive elements [30]; [37]; [47]–[51]. |
T9471 | 310-502 | Sentence | denotes | The reporter constructs were then transiently transfected into sub-confluent RAW264.7 macrophages and assayed for luciferase activity in the presence and absence of LPS or PMA, for comparison. |
T9470 | 0-309 | Sentence | denotes | To investigate cis-acting regulatory elements responsive to LPS in the 5′ flanking region of the murine SerpinB2 gene, nucleotides −4480 to +92 and a series of generated deletion mutants of the 5′ flanking region were cloned upstream of a promoter-less firefly luciferase reporter gene (pGL3 Basic) (Fig. 2A). |
T123 | 0-309 | Sentence | denotes | To investigate cis-acting regulatory elements responsive to LPS in the 5′ flanking region of the murine SerpinB2 gene, nucleotides −4480 to +92 and a series of generated deletion mutants of the 5′ flanking region were cloned upstream of a promoter-less firefly luciferase reporter gene (pGL3 Basic) (Fig. 2A). |
T124 | 310-502 | Sentence | denotes | The reporter constructs were then transiently transfected into sub-confluent RAW264.7 macrophages and assayed for luciferase activity in the presence and absence of LPS or PMA, for comparison. |
T125 | 503-722 | Sentence | denotes | PMA-induced SerpinB2 gene regulation has been extensively studied in human macrophage cell lines [45]–[47], and has been shown to occur through several proximal and distal AP-1 responsive elements [30]; [37]; [47]–[51]. |
T126 | 723-891 | Sentence | denotes | As shown in Fig. 2B, the SerpinB2 5′ flanking region from −4480 to +92 directs both PMA- and LPS-inducible transcription, approximately 2-fold and 7-fold, respectively. |
T127 | 892-1067 | Sentence | denotes | Deletion of the murine SerpinB2 promoter from −1686 to −1341 increased LPS-inducibility to approximately 16-fold, indicating the presence of a silencer element in this region. |
T128 | 1068-1334 | Sentence | denotes | Further deletion beyond −539 abolished the LPS-response of the promoter, indicating the presence of an essential LPS response element in the region between −539 and −189; however, the response of the murine SerpinB2 promoter to PMA is less affected by this deletion. |
T129 | 1335-1679 | Sentence | denotes | While deletion of the SerpinB2 promoter from −189 to −87 eliminated the LPS response and marginally reduced the PMA response, the −87 murine SerpinB2 promoter construct was still partially responsive to PMA, indicating that cis-acting elements mediating the response of the murine SerpinB2 promoter to PMA also lie downstream of nucleotide −87. |
simple1
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9564 | 1616-1624 | Protein | denotes | SerpinB2 |
T9563 | 1476-1484 | Protein | denotes | SerpinB2 |
T9562 | 1357-1365 | Protein | denotes | SerpinB2 |
T9561 | 1275-1283 | Protein | denotes | SerpinB2 |
T9560 | 915-923 | Protein | denotes | SerpinB2 |
T9559 | 748-756 | Protein | denotes | SerpinB2 |
T9558 | 515-523 | Protein | denotes | SerpinB2 |
T9557 | 424-434 | Protein | denotes | luciferase |
T9556 | 261-271 | Protein | denotes | luciferase |
T9555 | 104-112 | Protein | denotes | SerpinB2 |
BioNLP16_DUT
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9887 | 1579-1588 | Positive_regulation | denotes | mediating |
T9886 | 1593-1601 | Positive_regulation | denotes | response |
T9885 | 1341-1349 | Negative_regulation | denotes | deletion |
T9884 | 1435-1442 | Negative_regulation | denotes | reduced |
T9883 | 1308-1316 | Regulation | denotes | affected |
T9882 | 1252-1260 | Positive_regulation | denotes | response |
T9881 | 892-900 | Negative_regulation | denotes | Deletion |
T9880 | 953-962 | Positive_regulation | denotes | increased |
T9879 | 529-539 | Regulation | denotes | regulation |
T9878 | 503-514 | Positive_regulation | denotes | PMA-induced |
T9877 | 1357-1365 | Protein | denotes | SerpinB2 |
T9876 | 1616-1624 | Protein | denotes | SerpinB2 |
T9875 | 1476-1484 | Protein | denotes | SerpinB2 |
T9874 | 1275-1283 | Protein | denotes | SerpinB2 |
T9873 | 915-923 | Protein | denotes | SerpinB2 |
T9872 | 748-756 | Protein | denotes | SerpinB2 |
T9871 | 515-523 | Protein | denotes | SerpinB2 |
T9870 | 424-434 | Protein | denotes | luciferase |
T9869 | 261-271 | Protein | denotes | luciferase |
T9868 | 104-112 | Protein | denotes | SerpinB2 |
R7264 | T9871 | T9878 | themeOf | SerpinB2,PMA-induced |
R7265 | T9871 | T9879 | themeOf | SerpinB2,regulation |
R7266 | T9873 | T9881 | themeOf | SerpinB2,Deletion |
R7267 | T9873 | T9880 | themeOf | SerpinB2,increased |
R7268 | T9874 | T9882 | themeOf | SerpinB2,response |
R7269 | T9874 | T9883 | themeOf | SerpinB2,affected |
R7270 | T9876 | T9886 | themeOf | SerpinB2,response |
R7271 | T9877 | T9884 | themeOf | SerpinB2,reduced |
R7272 | T9877 | T9885 | themeOf | SerpinB2,deletion |
R7273 | T9879 | T9878 | themeOf | regulation,PMA-induced |
R7274 | T9882 | T9883 | themeOf | response,affected |
R7275 | T9886 | T9887 | themeOf | response,mediating |
BioNLP16_Messiy
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9928 | 261-271 | Protein | denotes | luciferase |
T9927 | 104-112 | Protein | denotes | SerpinB2 |
T9940 | 1341-1349 | Negative_regulation | denotes | deletion |
T9939 | 892-900 | Negative_regulation | denotes | Deletion |
T9938 | 503-514 | Positive_regulation | denotes | PMA-induced |
T9937 | 529-539 | Regulation | denotes | regulation |
T9936 | 1357-1365 | Protein | denotes | SerpinB2 |
T9935 | 1616-1624 | Protein | denotes | SerpinB2 |
T9934 | 1476-1484 | Protein | denotes | SerpinB2 |
T9933 | 1275-1283 | Protein | denotes | SerpinB2 |
T9932 | 915-923 | Protein | denotes | SerpinB2 |
T9931 | 748-756 | Protein | denotes | SerpinB2 |
T9930 | 515-523 | Protein | denotes | SerpinB2 |
T9929 | 424-434 | Protein | denotes | luciferase |
R7280 | T9930 | T9937 | themeOf | SerpinB2,regulation |
R7281 | T9932 | T9939 | themeOf | SerpinB2,Deletion |
R7282 | T9936 | T9940 | themeOf | SerpinB2,deletion |
R7283 | T9937 | T9938 | themeOf | regulation,PMA-induced |
DLUT931
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9913 | 1308-1316 | Regulation | denotes | affected |
T9912 | 953-962 | Positive_regulation | denotes | increased |
T9911 | 892-900 | Negative_regulation | denotes | Deletion |
T9910 | 1357-1365 | Protein | denotes | SerpinB2 |
T9909 | 1616-1624 | Protein | denotes | SerpinB2 |
T9908 | 1476-1484 | Protein | denotes | SerpinB2 |
T9907 | 1275-1283 | Protein | denotes | SerpinB2 |
T9906 | 915-923 | Protein | denotes | SerpinB2 |
T9905 | 748-756 | Protein | denotes | SerpinB2 |
T9904 | 515-523 | Protein | denotes | SerpinB2 |
T9903 | 424-434 | Protein | denotes | luciferase |
T9902 | 261-271 | Protein | denotes | luciferase |
T9901 | 104-112 | Protein | denotes | SerpinB2 |
T9914 | 1341-1349 | Negative_regulation | denotes | deletion |
R7276 | T9906 | T9911 | themeOf | SerpinB2,Deletion |
R7277 | T9907 | T9913 | themeOf | SerpinB2,affected |
R7278 | T9910 | T9914 | themeOf | SerpinB2,deletion |
R7279 | T9911 | T9912 | themeOf | Deletion,increased |
bionlp-st-ge-2016-test-ihmc
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T10018 | 503-604 | Regulation | denotes | PMA-induced SerpinB2 gene regulation has been extensively studied in human macrophage cell lines [45] |
T10017 | 1637-1640 | Entity | denotes | PMA |
T10016 | 748-756 | Protein | denotes | SerpinB2 |
T10015 | 1664-1674 | Entity | denotes | nucleotide |
T10014 | 1357-1365 | Protein | denotes | SerpinB2 |
T10013 | 104-112 | Protein | denotes | SerpinB2 |
T10012 | 1461-1484 | Protein | denotes | the −87 murine SerpinB2 |
T10011 | 482-485 | Entity | denotes | PMA |
T10010 | 424-434 | Protein | denotes | luciferase |
T10009 | 1296-1299 | Entity | denotes | PMA |
T10008 | 119-130 | Entity | denotes | nucleotides |
T10007 | 515-528 | Protein | denotes | SerpinB2 gene |
T10006 | 1264-1292 | Entity | denotes | the murine SerpinB2 promoter |
T10005 | 807-811 | Entity | denotes | PMA- |
T10004 | 1538-1542 | Entity | denotes | PMA, |
T10003 | 90-117 | Protein | denotes | of the murine SerpinB2 gene |
T10002 | 15-18 | Protein | denotes | cis |
T10001 | 1616-1624 | Protein | denotes | SerpinB2 |
T10000 | 503-514 | Entity | denotes | PMA-induced |
T9998 | 515-523 | Protein | denotes | SerpinB2 |
T9997 | 675-690 | Protein | denotes | AP-1 responsive |
T9996 | 475-478 | Entity | denotes | LPS |
T9994 | 1407-1410 | Entity | denotes | LPS |
T9993 | 1447-1450 | Entity | denotes | PMA |
T9992 | 578-588 | Entity | denotes | macrophage |
T9991 | 281-298 | Protein | denotes | gene (pGL3 Basic) |
T9990 | 60-117 | Entity | denotes | LPS in the 5′ flanking region of the murine SerpinB2 gene |
T9989 | 1350-1374 | Entity | denotes | of the SerpinB2 promoter |
T9988 | 253-271 | Protein | denotes | firefly luciferase |
T9987 | 287-291 | Protein | denotes | pGL3 |
T9986 | 963-979 | Entity | denotes | LPS-inducibility |
T9985 | 1275-1283 | Protein | denotes | SerpinB2 |
T9984 | 1485-1503 | Entity | denotes | promoter construct |
T9983 | 1181-1184 | Entity | denotes | LPS |
T9982 | 901-932 | Entity | denotes | of the murine SerpinB2 promoter |
T9981 | 915-923 | Protein | denotes | SerpinB2 |
T9979 | 1107-1140 | Entity | denotes | the LPS-response of the promoter, |
T9978 | 373-407 | Entity | denotes | sub-confluent RAW264.7 macrophages |
T9977 | 287-297 | Protein | denotes | pGL3 Basic |
T9976 | 1605-1633 | Entity | denotes | the murine SerpinB2 promoter |
T9975 | 1127-1139 | Entity | denotes | the promoter |
R7300 | T9976 | T10001 | partOf | the murine SerpinB2 promoter,SerpinB2 |
R7301 | T9982 | T9981 | partOf | of the murine SerpinB2 promoter,SerpinB2 |
R7302 | T9989 | T10014 | partOf | of the SerpinB2 promoter,SerpinB2 |
R7304 | T10006 | T9985 | partOf | the murine SerpinB2 promoter,SerpinB2 |
R7305 | T10007 | T10018 | themeOf | SerpinB2 gene,PMA-induced SerpinB2 gene regulation has been extensively studied in human macrophage cell lines [45] |
bionlp-st-ge-2016-test-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9957 | 1579-1588 | Positive_regulation | denotes | mediating |
T9956 | 1593-1601 | Positive_regulation | denotes | response |
T9955 | 1435-1442 | Negative_regulation | denotes | reduced |
T9954 | 1341-1349 | Negative_regulation | denotes | deletion |
T9953 | 1609-1633 | Protein | denotes | murine SerpinB2 promoter |
T9952 | 1357-1374 | Protein | denotes | SerpinB2 promoter |
T9951 | 1308-1316 | Regulation | denotes | affected |
T9950 | 1252-1260 | Positive_regulation | denotes | response |
T9949 | 1268-1292 | Protein | denotes | murine SerpinB2 promoter |
T9948 | 953-962 | Positive_regulation | denotes | increased |
T9947 | 892-900 | Gene_expression | denotes | Deletion |
T9946 | 908-932 | Protein | denotes | murine SerpinB2 promoter |
T9945 | 735-738 | Protein | denotes | Fig |
T9944 | 424-434 | Protein | denotes | luciferase |
T9943 | 261-271 | Protein | denotes | luciferase |
T9942 | 97-117 | Protein | denotes | murine SerpinB2 gene |
R7284 | T9946 | T9947 | themeOf | murine SerpinB2 promoter,Deletion |
R7285 | T9947 | T9948 | themeOf | Deletion,increased |
R7286 | T9949 | T9950 | themeOf | murine SerpinB2 promoter,response |
R7287 | T9950 | T9951 | themeOf | response,affected |
R7288 | T9952 | T9954 | themeOf | SerpinB2 promoter,deletion |
R7289 | T9953 | T9956 | themeOf | murine SerpinB2 promoter,response |
R7290 | T9954 | T9955 | themeOf | deletion,reduced |
R7291 | T9956 | T9957 | themeOf | response,mediating |
testone
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9444 | 953-962 | Positive_regulation | denotes | increased |
T9443 | 892-900 | Negative_regulation | denotes | Deletion |
T9442 | 1616-1624 | Protein | denotes | SerpinB2 |
T9441 | 1476-1484 | Protein | denotes | SerpinB2 |
T9440 | 1357-1365 | Protein | denotes | SerpinB2 |
T9439 | 1275-1283 | Protein | denotes | SerpinB2 |
T9438 | 915-923 | Protein | denotes | SerpinB2 |
T9437 | 748-756 | Protein | denotes | SerpinB2 |
T9436 | 515-523 | Protein | denotes | SerpinB2 |
T9435 | 424-434 | Protein | denotes | luciferase |
T9434 | 261-271 | Protein | denotes | luciferase |
T9433 | 104-112 | Protein | denotes | SerpinB2 |
test3
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9458 | 261-271 | Protein | denotes | luciferase |
T9457 | 104-112 | Protein | denotes | SerpinB2 |
T9455 | 1616-1624 | Protein | denotes | SerpinB2 |
T9454 | 1476-1484 | Protein | denotes | SerpinB2 |
T9453 | 1357-1365 | Protein | denotes | SerpinB2 |
T9452 | 1275-1283 | Protein | denotes | SerpinB2 |
T9451 | 915-923 | Protein | denotes | SerpinB2 |
T9450 | 748-756 | Protein | denotes | SerpinB2 |
T9449 | 515-523 | Protein | denotes | SerpinB2 |
T9448 | 424-434 | Protein | denotes | luciferase |
T9447 | 261-271 | Protein | denotes | luciferase |
T9446 | 104-112 | Protein | denotes | SerpinB2 |
T9467 | 1616-1624 | Protein | denotes | SerpinB2 |
T9466 | 1476-1484 | Protein | denotes | SerpinB2 |
T9465 | 1357-1365 | Protein | denotes | SerpinB2 |
T9464 | 1341-1349 | Negative_regulation | denotes | deletion |
T9463 | 1275-1283 | Protein | denotes | SerpinB2 |
T9462 | 915-923 | Protein | denotes | SerpinB2 |
T9461 | 748-756 | Protein | denotes | SerpinB2 |
T9460 | 515-523 | Protein | denotes | SerpinB2 |
T9459 | 424-434 | Protein | denotes | luciferase |