PMC:3589482 / 17496-17660 JSON TXT

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bionlp-st-ge-2016-spacy-parsed

pmc-enju-pas

{"project":"pmc-enju-pas","denotations":[{"id":"T9090","span":{"begin":162,"end":163},"obj":"-RRB-"},{"id":"T9089","span":{"begin":160,"end":162},"obj":"NN"},{"id":"T9088","span":{"begin":155,"end":159},"obj":"NNP"},{"id":"T9087","span":{"begin":154,"end":155},"obj":"-LRB-"},{"id":"T9086","span":{"begin":150,"end":153},"obj":"NN"},{"id":"T9085","span":{"begin":147,"end":149},"obj":"CD"},{"id":"T9084","span":{"begin":144,"end":146},"obj":"IN"},{"id":"T9083","span":{"begin":137,"end":143},"obj":"NN"},{"id":"T9082","span":{"begin":129,"end":136},"obj":"JJ"},{"id":"T9081","span":{"begin":120,"end":128},"obj":"VB"},{"id":"T9080","span":{"begin":118,"end":119},"obj":"-COMMA-"},{"id":"T9079","span":{"begin":109,"end":118},"obj":"NN"},{"id":"T9078","span":{"begin":105,"end":108},"obj":"NN"},{"id":"T9077","span":{"begin":95,"end":104},"obj":"VB"},{"id":"T9076","span":{"begin":91,"end":94},"obj":"NN"},{"id":"T9075","span":{"begin":88,"end":90},"obj":"CD"},{"id":"T9074","span":{"begin":85,"end":87},"obj":"IN"},{"id":"T9073","span":{"begin":79,"end":84},"obj":"RB"},{"id":"T9072","span":{"begin":76,"end":78},"obj":"RB"},{"id":"T9071","span":{"begin":65,"end":75},"obj":"JJ"},{"id":"T9070","span":{"begin":61,"end":64},"obj":"VB"},{"id":"T9069","span":{"begin":56,"end":60},"obj":"NN"},{"id":"T9068","span":{"begin":47,"end":55},"obj":"NN"},{"id":"T9067","span":{"begin":45,"end":46},"obj":"-COMMA-"},{"id":"T9066","span":{"begin":42,"end":45},"obj":"NN"},{"id":"T9065","span":{"begin":39,"end":41},"obj":"TO"},{"id":"T9064","span":{"begin":31,"end":38},"obj":"VB"},{"id":"T9063","span":{"begin":26,"end":30},"obj":"VB"},{"id":"T9062","span":{"begin":14,"end":25},"obj":"NN"},{"id":"T9061","span":{"begin":5,"end":13},"obj":"NN"},{"id":"T9060","span":{"begin":0,"end":4},"obj":"WRB"}],"relations":[{"id":"R6617","pred":"arg1Of","subj":"T9062","obj":"T9061"},{"id":"R6618","pred":"arg1Of","subj":"T9062","obj":"T9063"},{"id":"R6619","pred":"arg2Of","subj":"T9062","obj":"T9064"},{"id":"R6620","pred":"arg2Of","subj":"T9064","obj":"T9060"},{"id":"R6621","pred":"arg2Of","subj":"T9064","obj":"T9063"},{"id":"R6622","pred":"arg1Of","subj":"T9064","obj":"T9065"},{"id":"R6623","pred":"arg2Of","subj":"T9066","obj":"T9065"},{"id":"R6624","pred":"arg1Of","subj":"T9069","obj":"T9068"},{"id":"R6625","pred":"arg1Of","subj":"T9069","obj":"T9070"},{"id":"R6626","pred":"arg1Of","subj":"T9069","obj":"T9071"},{"id":"R6627","pred":"arg1Of","subj":"T9070","obj":"T9060"},{"id":"R6628","pred":"arg1Of","subj":"T9070","obj":"T9067"},{"id":"R6629","pred":"arg1Of","subj":"T9070","obj":"T9077"},{"id":"R6630","pred":"arg1Of","subj":"T9070","obj":"T9080"},{"id":"R6631","pred":"arg2Of","subj":"T9071","obj":"T9070"},{"id":"R6632","pred":"arg1Of","subj":"T9071","obj":"T9073"},{"id":"R6633","pred":"arg1Of","subj":"T9073","obj":"T9072"},{"id":"R6634","pred":"arg1Of","subj":"T9073","obj":"T9074"},{"id":"R6635","pred":"arg2Of","subj":"T9076","obj":"T9074"},{"id":"R6636","pred":"arg1Of","subj":"T9076","obj":"T9075"},{"id":"R6637","pred":"arg2Of","subj":"T9079","obj":"T9077"},{"id":"R6638","pred":"arg1Of","subj":"T9079","obj":"T9078"},{"id":"R6639","pred":"arg3Of","subj":"T9081","obj":"T9070"},{"id":"R6640","pred":"arg1Of","subj":"T9081","obj":"T9084"},{"id":"R6641","pred":"arg2Of","subj":"T9083","obj":"T9081"},{"id":"R6642","pred":"arg1Of","subj":"T9083","obj":"T9082"},{"id":"R6643","pred":"arg2Of","subj":"T9086","obj":"T9084"},{"id":"R6644","pred":"arg1Of","subj":"T9086","obj":"T9085"},{"id":"R6645","pred":"arg1Of","subj":"T9086","obj":"T9087"},{"id":"R6646","pred":"arg2Of","subj":"T9089","obj":"T9087"},{"id":"R6647","pred":"arg1Of","subj":"T9089","obj":"T9088"},{"id":"R6648","pred":"arg3Of","subj":"T9090","obj":"T9087"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"When RAW264.7 macrophages were exposed to LPS, SerpinB2 mRNA was detectable as early as 30 min following LPS challenge, reaching maximal levels at 24 hrs (Fig. 1A)."}

bionlp-st-ge-2016-test-proteins

{"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T9034","span":{"begin":47,"end":55},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"When RAW264.7 macrophages were exposed to LPS, SerpinB2 mRNA was detectable as early as 30 min following LPS challenge, reaching maximal levels at 24 hrs (Fig. 1A)."}

bionlp-st-ge-2016-uniprot

{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T9195","span":{"begin":47,"end":55},"obj":"http://www.uniprot.org/uniprot/P05120"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"When RAW264.7 macrophages were exposed to LPS, SerpinB2 mRNA was detectable as early as 30 min following LPS challenge, reaching maximal levels at 24 hrs (Fig. 1A)."}

sentences

{"project":"sentences","denotations":[{"id":"T9014","span":{"begin":0,"end":164},"obj":"Sentence"},{"id":"T114","span":{"begin":0,"end":164},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"When RAW264.7 macrophages were exposed to LPS, SerpinB2 mRNA was detectable as early as 30 min following LPS challenge, reaching maximal levels at 24 hrs (Fig. 1A)."}

simple1

{"project":"simple1","denotations":[{"id":"T9048","span":{"begin":47,"end":55},"obj":"Protein"}],"text":"When RAW264.7 macrophages were exposed to LPS, SerpinB2 mRNA was detectable as early as 30 min following LPS challenge, reaching maximal levels at 24 hrs (Fig. 1A)."}

BioNLP16_DUT

{"project":"BioNLP16_DUT","denotations":[{"id":"T9186","span":{"begin":65,"end":75},"obj":"Transcription"},{"id":"T9182","span":{"begin":47,"end":55},"obj":"Protein"}],"relations":[{"id":"R6740","pred":"themeOf","subj":"T9182","obj":"T9186"}],"text":"When RAW264.7 macrophages were exposed to LPS, SerpinB2 mRNA was detectable as early as 30 min following LPS challenge, reaching maximal levels at 24 hrs (Fig. 1A)."}

BioNLP16_Messiy

{"project":"BioNLP16_Messiy","denotations":[{"id":"T9222","span":{"begin":47,"end":55},"obj":"Protein"}],"text":"When RAW264.7 macrophages were exposed to LPS, SerpinB2 mRNA was detectable as early as 30 min following LPS challenge, reaching maximal levels at 24 hrs (Fig. 1A)."}

DLUT931

{"project":"DLUT931","denotations":[{"id":"T9205","span":{"begin":56,"end":60},"obj":"Transcription"},{"id":"T9200","span":{"begin":47,"end":55},"obj":"Protein"}],"relations":[{"id":"R6749","pred":"themeOf","subj":"T9200","obj":"T9205"}],"text":"When RAW264.7 macrophages were exposed to LPS, SerpinB2 mRNA was detectable as early as 30 min following LPS challenge, reaching maximal levels at 24 hrs (Fig. 1A)."}

bionlp-st-ge-2016-test-ihmc

{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T9277","span":{"begin":105,"end":108},"obj":"Entity"},{"id":"T9271","span":{"begin":56,"end":60},"obj":"Protein"},{"id":"T9263","span":{"begin":147,"end":163},"obj":"Protein"},{"id":"T9262","span":{"begin":47,"end":90},"obj":"Protein"},{"id":"T9260","span":{"begin":5,"end":25},"obj":"Entity"},{"id":"T9259","span":{"begin":42,"end":46},"obj":"Entity"}],"text":"When RAW264.7 macrophages were exposed to LPS, SerpinB2 mRNA was detectable as early as 30 min following LPS challenge, reaching maximal levels at 24 hrs (Fig. 1A)."}

bionlp-st-ge-2016-test-tees

{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T9234","span":{"begin":47,"end":60},"obj":"Protein"}],"text":"When RAW264.7 macrophages were exposed to LPS, SerpinB2 mRNA was detectable as early as 30 min following LPS challenge, reaching maximal levels at 24 hrs (Fig. 1A)."}

testone

{"project":"testone","denotations":[{"id":"T8988","span":{"begin":95,"end":104},"obj":"Positive_regulation"},{"id":"T8984","span":{"begin":47,"end":55},"obj":"Protein"}],"text":"When RAW264.7 macrophages were exposed to LPS, SerpinB2 mRNA was detectable as early as 30 min following LPS challenge, reaching maximal levels at 24 hrs (Fig. 1A)."}

test3

{"project":"test3","denotations":[{"id":"T9001","span":{"begin":95,"end":104},"obj":"Positive_regulation"},{"id":"T9000","span":{"begin":47,"end":55},"obj":"Protein"},{"id":"T8995","span":{"begin":47,"end":55},"obj":"Protein"}],"text":"When RAW264.7 macrophages were exposed to LPS, SerpinB2 mRNA was detectable as early as 30 min following LPS challenge, reaching maximal levels at 24 hrs (Fig. 1A)."}

PMC:3589482 / 17496-17660 JSONTXT

Annnotations TAB JSON ListView MergeView

PMC:3589482 / 17496-17660 JSON TXT