PMC:3589482 / 14260-14435 JSONTXT

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    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T7731","span":{"begin":174,"end":175},"obj":"."},{"id":"T7730","span":{"begin":173,"end":174},"obj":"-RRB-"},{"id":"T7729","span":{"begin":170,"end":173},"obj":"NN"},{"id":"T7728","span":{"begin":164,"end":169},"obj":"JJ"},{"id":"T7727","span":{"begin":161,"end":163},"obj":"NN"},{"id":"T7726","span":{"begin":157,"end":160},"obj":"CD"},{"id":"T7725","span":{"begin":153,"end":156},"obj":"CD"},{"id":"T7724","span":{"begin":152,"end":153},"obj":"-LRB-"},{"id":"T7723","span":{"begin":137,"end":151},"obj":"VBN"},{"id":"T7722","span":{"begin":132,"end":136},"obj":"VBD"},{"id":"T7721","span":{"begin":125,"end":131},"obj":"NN"},{"id":"T7720","span":{"begin":117,"end":124},"obj":"VB"},{"id":"T7719","span":{"begin":114,"end":116},"obj":"CC"},{"id":"T7718","span":{"begin":112,"end":113},"obj":"NNP"},{"id":"T7717","span":{"begin":110,"end":112},"obj":"CD"},{"id":"T7716","span":{"begin":109,"end":110},"obj":"NNP"},{"id":"T7715","span":{"begin":107,"end":108},"obj":"NNP"},{"id":"T7714","span":{"begin":105,"end":107},"obj":"CD"},{"id":"T7713","span":{"begin":104,"end":105},"obj":"NNP"},{"id":"T7712","span":{"begin":102,"end":103},"obj":"-RRB-"},{"id":"T7711","span":{"begin":98,"end":102},"obj":"NNP"},{"id":"T7710","span":{"begin":96,"end":97},"obj":","},{"id":"T7709","span":{"begin":91,"end":96},"obj":"CD"},{"id":"T7708","span":{"begin":89,"end":90},"obj":","},{"id":"T7707","span":{"begin":84,"end":89},"obj":"CD"},{"id":"T7706","span":{"begin":83,"end":84},"obj":"-LRB-"},{"id":"T7705","span":{"begin":75,"end":82},"obj":"NNS"},{"id":"T7704","span":{"begin":58,"end":74},"obj":"NN"},{"id":"T7703","span":{"begin":56,"end":57},"obj":"NN"},{"id":"T7702","span":{"begin":55,"end":56},"obj":":"},{"id":"T7701","span":{"begin":50,"end":55},"obj":"SYM"},{"id":"T7700","span":{"begin":47,"end":49},"obj":"CC"},{"id":"T7699","span":{"begin":45,"end":46},"obj":"NN"},{"id":"T7698","span":{"begin":44,"end":45},"obj":":"},{"id":"T7697","span":{"begin":39,"end":44},"obj":"NNP"},{"id":"T7696","span":{"begin":30,"end":38},"obj":"VBG"},{"id":"T7695","span":{"begin":21,"end":29},"obj":"NNS"},{"id":"T7694","span":{"begin":19,"end":20},"obj":","},{"id":"T7693","span":{"begin":8,"end":19},"obj":"NNS"},{"id":"T7692","span":{"begin":3,"end":7},"obj":"DT"},{"id":"T7691","span":{"begin":0,"end":2},"obj":"IN"}],"relations":[{"id":"R5497","pred":"ROOT","subj":"T7691","obj":"T7691"},{"id":"R5498","pred":"det","subj":"T7692","obj":"T7693"},{"id":"R5499","pred":"pobj","subj":"T7693","obj":"T7691"},{"id":"R5500","pred":"punct","subj":"T7694","obj":"T7693"},{"id":"R5501","pred":"nmod","subj":"T7695","obj":"T7699"},{"id":"R5502","pred":"acl","subj":"T7696","obj":"T7695"},{"id":"R5503","pred":"compound","subj":"T7697","obj":"T7699"},{"id":"R5504","pred":"punct","subj":"T7698","obj":"T7699"},{"id":"R5505","pred":"dative","subj":"T7699","obj":"T7694"},{"id":"R5506","pred":"cc","subj":"T7700","obj":"T7699"},{"id":"R5507","pred":"punct","subj":"T7701","obj":"T7703"},{"id":"R5508","pred":"punct","subj":"T7702","obj":"T7703"},{"id":"R5509","pred":"nmod","subj":"T7703","obj":"T7705"},{"id":"R5510","pred":"compound","subj":"T7704","obj":"T7705"},{"id":"R5511","pred":"conj","subj":"T7705","obj":"T7699"},{"id":"R5512","pred":"punct","subj":"T7706","obj":"T7705"},{"id":"R5513","pred":"appos","subj":"T7707","obj":"T7705"},{"id":"R5514","pred":"punct","subj":"T7708","obj":"T7707"},{"id":"R5515","pred":"appos","subj":"T7709","obj":"T7707"},{"id":"R5516","pred":"punct","subj":"T7710","obj":"T7705"},{"id":"R5517","pred":"appos","subj":"T7711","obj":"T7705"},{"id":"R5518","pred":"punct","subj":"T7712","obj":"T7705"},{"id":"R5519","pred":"nmod","subj":"T7713","obj":"T7715"},{"id":"R5520","pred":"nummod","subj":"T7714","obj":"T7715"},{"id":"R5521","pred":"nsubjpass","subj":"T7715","obj":"T7723"},{"id":"R5522","pred":"appos","subj":"T7716","obj":"T7715"},{"id":"R5523","pred":"nummod","subj":"T7717","obj":"T7718"},{"id":"R5524","pred":"dobj","subj":"T7718","obj":"T7716"},{"id":"R5525","pred":"cc","subj":"T7719","obj":"T7716"},{"id":"R5526","pred":"amod","subj":"T7720","obj":"T7721"},{"id":"R5527","pred":"conj","subj":"T7721","obj":"T7716"},{"id":"R5528","pred":"auxpass","subj":"T7722","obj":"T7723"},{"id":"R5529","pred":"ROOT","subj":"T7723","obj":"T7723"},{"id":"R5530","pred":"punct","subj":"T7724","obj":"T7723"},{"id":"R5531","pred":"nummod","subj":"T7725","obj":"T7727"},{"id":"R5532","pred":"nummod","subj":"T7726","obj":"T7727"},{"id":"R5533","pred":"appos","subj":"T7727","obj":"T7723"},{"id":"R5534","pred":"amod","subj":"T7728","obj":"T7729"},{"id":"R5535","pred":"appos","subj":"T7729","obj":"T7727"},{"id":"R5536","pred":"punct","subj":"T7730","obj":"T7727"},{"id":"R5537","pred":"punct","subj":"T7731","obj":"T7723"}],"text":"In some experiments, plasmids encoding C/EBP-β or C/EBP-β phospho-acceptor mutants (T188A, T217A, S64A) [38]–[40] or control vector were co-transfected (0.6–1.0 µg total DNA)."}

    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T7395","span":{"begin":173,"end":174},"obj":"-RRB-"},{"id":"T7394","span":{"begin":170,"end":173},"obj":"NN"},{"id":"T7393","span":{"begin":164,"end":169},"obj":"JJ"},{"id":"T7392","span":{"begin":161,"end":163},"obj":"NN"},{"id":"T7391","span":{"begin":153,"end":160},"obj":"CD"},{"id":"T7390","span":{"begin":152,"end":153},"obj":"-LRB-"},{"id":"T7389","span":{"begin":137,"end":151},"obj":"VB"},{"id":"T7388","span":{"begin":132,"end":136},"obj":"VB"},{"id":"T7387","span":{"begin":125,"end":131},"obj":"NN"},{"id":"T7386","span":{"begin":117,"end":124},"obj":"NN"},{"id":"T7385","span":{"begin":114,"end":116},"obj":"CC"},{"id":"T7384","span":{"begin":112,"end":113},"obj":"-RRB-"},{"id":"T7383","span":{"begin":110,"end":112},"obj":"CD"},{"id":"T7382","span":{"begin":109,"end":110},"obj":"-LRB-"},{"id":"T7381","span":{"begin":108,"end":109},"obj":"CD"},{"id":"T7380","span":{"begin":107,"end":108},"obj":"-RRB-"},{"id":"T7379","span":{"begin":105,"end":107},"obj":"CD"},{"id":"T7378","span":{"begin":104,"end":105},"obj":"-LRB-"},{"id":"T7377","span":{"begin":102,"end":103},"obj":"-RRB-"},{"id":"T7376","span":{"begin":98,"end":102},"obj":"NN"},{"id":"T7375","span":{"begin":96,"end":97},"obj":"-COMMA-"},{"id":"T7374","span":{"begin":91,"end":96},"obj":"NN"},{"id":"T7373","span":{"begin":89,"end":90},"obj":"-COMMA-"},{"id":"T7372","span":{"begin":84,"end":89},"obj":"NN"},{"id":"T7371","span":{"begin":83,"end":84},"obj":"-LRB-"},{"id":"T7370","span":{"begin":75,"end":82},"obj":"NN"},{"id":"T7369","span":{"begin":58,"end":74},"obj":"NN"},{"id":"T7368","span":{"begin":50,"end":57},"obj":"JJ"},{"id":"T7367","span":{"begin":47,"end":49},"obj":"CC"},{"id":"T7366","span":{"begin":39,"end":46},"obj":"NN"},{"id":"T7365","span":{"begin":30,"end":38},"obj":"VB"},{"id":"T7364","span":{"begin":21,"end":29},"obj":"NN"},{"id":"T7363","span":{"begin":19,"end":20},"obj":"-COMMA-"},{"id":"T7362","span":{"begin":8,"end":19},"obj":"NN"},{"id":"T7361","span":{"begin":3,"end":7},"obj":"DT"},{"id":"T7360","span":{"begin":0,"end":2},"obj":"IN"}],"relations":[{"id":"R5278","pred":"arg2Of","subj":"T7362","obj":"T7360"},{"id":"R5279","pred":"arg1Of","subj":"T7362","obj":"T7361"},{"id":"R5280","pred":"arg1Of","subj":"T7364","obj":"T7365"},{"id":"R5281","pred":"arg1Of","subj":"T7364","obj":"T7381"},{"id":"R5282","pred":"arg1Of","subj":"T7364","obj":"T7382"},{"id":"R5283","pred":"arg1Of","subj":"T7364","obj":"T7385"},{"id":"R5284","pred":"arg1Of","subj":"T7365","obj":"T7378"},{"id":"R5285","pred":"arg2Of","subj":"T7370","obj":"T7365"},{"id":"R5286","pred":"arg1Of","subj":"T7370","obj":"T7366"},{"id":"R5287","pred":"arg1Of","subj":"T7370","obj":"T7367"},{"id":"R5288","pred":"arg1Of","subj":"T7370","obj":"T7368"},{"id":"R5289","pred":"arg1Of","subj":"T7370","obj":"T7369"},{"id":"R5290","pred":"arg1Of","subj":"T7370","obj":"T7371"},{"id":"R5291","pred":"arg2Of","subj":"T7372","obj":"T7371"},{"id":"R5292","pred":"arg1Of","subj":"T7372","obj":"T7373"},{"id":"R5293","pred":"arg1Of","subj":"T7372","obj":"T7375"},{"id":"R5294","pred":"arg2Of","subj":"T7374","obj":"T7373"},{"id":"R5295","pred":"arg2Of","subj":"T7376","obj":"T7375"},{"id":"R5296","pred":"arg3Of","subj":"T7377","obj":"T7371"},{"id":"R5297","pred":"arg2Of","subj":"T7379","obj":"T7378"},{"id":"R5298","pred":"arg3Of","subj":"T7380","obj":"T7378"},{"id":"R5299","pred":"arg2Of","subj":"T7383","obj":"T7382"},{"id":"R5300","pred":"arg3Of","subj":"T7384","obj":"T7382"},{"id":"R5301","pred":"arg1Of","subj":"T7385","obj":"T7388"},{"id":"R5302","pred":"arg2Of","subj":"T7385","obj":"T7389"},{"id":"R5303","pred":"arg2Of","subj":"T7387","obj":"T7385"},{"id":"R5304","pred":"arg1Of","subj":"T7387","obj":"T7386"},{"id":"R5305","pred":"arg1Of","subj":"T7389","obj":"T7360"},{"id":"R5306","pred":"arg1Of","subj":"T7389","obj":"T7363"},{"id":"R5307","pred":"arg2Of","subj":"T7389","obj":"T7388"},{"id":"R5308","pred":"arg1Of","subj":"T7389","obj":"T7390"},{"id":"R5309","pred":"arg2Of","subj":"T7394","obj":"T7390"},{"id":"R5310","pred":"arg1Of","subj":"T7394","obj":"T7391"},{"id":"R5311","pred":"arg1Of","subj":"T7394","obj":"T7392"},{"id":"R5312","pred":"arg1Of","subj":"T7394","obj":"T7393"},{"id":"R5313","pred":"arg3Of","subj":"T7395","obj":"T7390"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"In some experiments, plasmids encoding C/EBP-β or C/EBP-β phospho-acceptor mutants (T188A, T217A, S64A) [38]–[40] or control vector were co-transfected (0.6–1.0 µg total DNA)."}

    bionlp-st-ge-2016-test-proteins

    {"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T7242","span":{"begin":98,"end":102},"obj":"Protein"},{"id":"T7241","span":{"begin":91,"end":96},"obj":"Protein"},{"id":"T7240","span":{"begin":84,"end":89},"obj":"Protein"},{"id":"T7239","span":{"begin":50,"end":82},"obj":"Protein"},{"id":"T7238","span":{"begin":39,"end":46},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"In some experiments, plasmids encoding C/EBP-β or C/EBP-β phospho-acceptor mutants (T188A, T217A, S64A) [38]–[40] or control vector were co-transfected (0.6–1.0 µg total DNA)."}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T7495","span":{"begin":50,"end":57},"obj":"http://www.uniprot.org/uniprot/P28033"},{"id":"T7494","span":{"begin":39,"end":46},"obj":"http://www.uniprot.org/uniprot/P28033"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"In some experiments, plasmids encoding C/EBP-β or C/EBP-β phospho-acceptor mutants (T188A, T217A, S64A) [38]–[40] or control vector were co-transfected (0.6–1.0 µg total DNA)."}

    sentences

    {"project":"sentences","denotations":[{"id":"T7213","span":{"begin":0,"end":175},"obj":"Sentence"},{"id":"T87","span":{"begin":0,"end":175},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"In some experiments, plasmids encoding C/EBP-β or C/EBP-β phospho-acceptor mutants (T188A, T217A, S64A) [38]–[40] or control vector were co-transfected (0.6–1.0 µg total DNA)."}

    simple1

    {"project":"simple1","denotations":[{"id":"T7268","span":{"begin":98,"end":102},"obj":"Protein"},{"id":"T7267","span":{"begin":91,"end":96},"obj":"Protein"},{"id":"T7266","span":{"begin":84,"end":89},"obj":"Protein"},{"id":"T7265","span":{"begin":50,"end":82},"obj":"Protein"},{"id":"T7264","span":{"begin":39,"end":46},"obj":"Protein"}],"text":"In some experiments, plasmids encoding C/EBP-β or C/EBP-β phospho-acceptor mutants (T188A, T217A, S64A) [38]–[40] or control vector were co-transfected (0.6–1.0 µg total DNA)."}

    BioNLP16_DUT

    {"project":"BioNLP16_DUT","denotations":[{"id":"T7488","span":{"begin":137,"end":151},"obj":"Gene_expression"},{"id":"T7481","span":{"begin":91,"end":96},"obj":"Protein"},{"id":"T7480","span":{"begin":84,"end":89},"obj":"Protein"},{"id":"T7479","span":{"begin":50,"end":82},"obj":"Protein"},{"id":"T7478","span":{"begin":39,"end":46},"obj":"Protein"},{"id":"T7477","span":{"begin":98,"end":102},"obj":"Protein"}],"relations":[{"id":"R5382","pred":"themeOf","subj":"T7477","obj":"T7488"},{"id":"R5383","pred":"themeOf","subj":"T7481","obj":"T7488"}],"text":"In some experiments, plasmids encoding C/EBP-β or C/EBP-β phospho-acceptor mutants (T188A, T217A, S64A) [38]–[40] or control vector were co-transfected (0.6–1.0 µg total DNA)."}

    BioNLP16_Messiy

    {"project":"BioNLP16_Messiy","denotations":[{"id":"T7538","span":{"begin":50,"end":82},"obj":"Protein"},{"id":"T7537","span":{"begin":39,"end":46},"obj":"Protein"},{"id":"T7536","span":{"begin":98,"end":102},"obj":"Protein"},{"id":"T7547","span":{"begin":137,"end":151},"obj":"Gene_expression"},{"id":"T7540","span":{"begin":91,"end":96},"obj":"Protein"},{"id":"T7539","span":{"begin":84,"end":89},"obj":"Protein"}],"relations":[{"id":"R5393","pred":"themeOf","subj":"T7536","obj":"T7547"},{"id":"R5394","pred":"themeOf","subj":"T7537","obj":"T7547"},{"id":"R5395","pred":"themeOf","subj":"T7539","obj":"T7547"},{"id":"R5396","pred":"themeOf","subj":"T7540","obj":"T7547"}],"text":"In some experiments, plasmids encoding C/EBP-β or C/EBP-β phospho-acceptor mutants (T188A, T217A, S64A) [38]–[40] or control vector were co-transfected (0.6–1.0 µg total DNA)."}

    DLUT931

    {"project":"DLUT931","denotations":[{"id":"T7513","span":{"begin":137,"end":151},"obj":"Gene_expression"},{"id":"T7507","span":{"begin":91,"end":96},"obj":"Protein"},{"id":"T7506","span":{"begin":84,"end":89},"obj":"Protein"},{"id":"T7505","span":{"begin":50,"end":82},"obj":"Protein"},{"id":"T7504","span":{"begin":39,"end":46},"obj":"Protein"},{"id":"T7503","span":{"begin":98,"end":102},"obj":"Protein"}],"relations":[{"id":"R5385","pred":"themeOf","subj":"T7503","obj":"T7513"},{"id":"R5386","pred":"themeOf","subj":"T7504","obj":"T7513"},{"id":"R5387","pred":"themeOf","subj":"T7505","obj":"T7513"},{"id":"R5388","pred":"themeOf","subj":"T7506","obj":"T7513"},{"id":"R5389","pred":"themeOf","subj":"T7507","obj":"T7513"}],"text":"In some experiments, plasmids encoding C/EBP-β or C/EBP-β phospho-acceptor mutants (T188A, T217A, S64A) [38]–[40] or control vector were co-transfected (0.6–1.0 µg total DNA)."}

    bionlp-st-ge-2016-test-ihmc

    {"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T7589","span":{"begin":170,"end":173},"obj":"Entity"},{"id":"T7587","span":{"begin":84,"end":102},"obj":"Protein"},{"id":"T7582","span":{"begin":91,"end":96},"obj":"Protein"},{"id":"T7578","span":{"begin":84,"end":97},"obj":"Protein"},{"id":"T7577","span":{"begin":39,"end":46},"obj":"Protein"},{"id":"T7576","span":{"begin":50,"end":103},"obj":"Protein"}],"text":"In some experiments, plasmids encoding C/EBP-β or C/EBP-β phospho-acceptor mutants (T188A, T217A, S64A) [38]–[40] or control vector were co-transfected (0.6–1.0 µg total DNA)."}

    bionlp-st-ge-2016-test-tees

    {"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T7553","span":{"begin":50,"end":57},"obj":"Protein"},{"id":"T7552","span":{"begin":39,"end":46},"obj":"Protein"}],"text":"In some experiments, plasmids encoding C/EBP-β or C/EBP-β phospho-acceptor mutants (T188A, T217A, S64A) [38]–[40] or control vector were co-transfected (0.6–1.0 µg total DNA)."}

    testone

    {"project":"testone","denotations":[{"id":"T7170","span":{"begin":98,"end":102},"obj":"Protein"},{"id":"T7169","span":{"begin":91,"end":96},"obj":"Protein"},{"id":"T7168","span":{"begin":84,"end":89},"obj":"Protein"},{"id":"T7167","span":{"begin":50,"end":82},"obj":"Protein"},{"id":"T7166","span":{"begin":39,"end":46},"obj":"Protein"}],"relations":[{"id":"R5184","pred":"equivalentTo","subj":"T7168","obj":"T7167"}],"text":"In some experiments, plasmids encoding C/EBP-β or C/EBP-β phospho-acceptor mutants (T188A, T217A, S64A) [38]–[40] or control vector were co-transfected (0.6–1.0 µg total DNA)."}

    test3

    {"project":"test3","denotations":[{"id":"T7202","span":{"begin":98,"end":102},"obj":"Protein"},{"id":"T7201","span":{"begin":91,"end":96},"obj":"Protein"},{"id":"T7200","span":{"begin":84,"end":89},"obj":"Protein"},{"id":"T7199","span":{"begin":50,"end":82},"obj":"Protein"},{"id":"T7198","span":{"begin":39,"end":46},"obj":"Protein"},{"id":"T7187","span":{"begin":98,"end":102},"obj":"Protein"},{"id":"T7186","span":{"begin":91,"end":96},"obj":"Protein"},{"id":"T7185","span":{"begin":84,"end":89},"obj":"Protein"},{"id":"T7184","span":{"begin":50,"end":82},"obj":"Protein"},{"id":"T7183","span":{"begin":39,"end":46},"obj":"Protein"}],"relations":[{"id":"R5187","pred":"equivalentTo","subj":"T7200","obj":"T7199"}],"text":"In some experiments, plasmids encoding C/EBP-β or C/EBP-β phospho-acceptor mutants (T188A, T217A, S64A) [38]–[40] or control vector were co-transfected (0.6–1.0 µg total DNA)."}