PMC:3589482 / 0-280
Annnotations
bionlp-st-ge-2016-spacy-parsed
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pmc-enju-pas
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bionlp-st-ge-2016-test-proteins
{"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T157","span":{"begin":25,"end":32},"obj":"Protein"},{"id":"T158","span":{"begin":97,"end":105},"obj":"Protein"},{"id":"T159","span":{"begin":156,"end":164},"obj":"Protein"},{"id":"T160","span":{"begin":168,"end":206},"obj":"Protein"},{"id":"T161","span":{"begin":208,"end":213},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"The Transcription Factor C/EBP-β Mediates Constitutive and LPS-Inducible Transcription of Murine SerpinB2\nC/EBP-β Mediates SerpinB2 Transcription\n\nAbstract\nSerpinB2 or plasminogen activator inhibitor type 2 (PAI-2) is highly induced in macrophages in response to inflammatory stim"}
bionlp-st-ge-2016-uniprot
{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T530","span":{"begin":156,"end":164},"obj":"http://www.uniprot.org/uniprot/P05120"},{"id":"T537","span":{"begin":205,"end":211},"obj":"http://www.uniprot.org/uniprot/P05120"},{"id":"T524","span":{"begin":25,"end":32},"obj":"http://www.uniprot.org/uniprot/P28033"},{"id":"T529","span":{"begin":97,"end":105},"obj":"http://www.uniprot.org/uniprot/P05120"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"The Transcription Factor C/EBP-β Mediates Constitutive and LPS-Inducible Transcription of Murine SerpinB2\nC/EBP-β Mediates SerpinB2 Transcription\n\nAbstract\nSerpinB2 or plasminogen activator inhibitor type 2 (PAI-2) is highly induced in macrophages in response to inflammatory stim"}
GO-BP
{"project":"GO-BP","denotations":[{"id":"T176","span":{"begin":4,"end":17},"obj":"http://purl.obolibrary.org/obo/GO_0006351"},{"id":"T177","span":{"begin":73,"end":86},"obj":"http://purl.obolibrary.org/obo/GO_0006351"},{"id":"T180","span":{"begin":251,"end":275},"obj":"http://purl.obolibrary.org/obo/GO_0006954"},{"id":"T178","span":{"begin":168,"end":189},"obj":"http://purl.obolibrary.org/obo/GO_0031639"}],"text":"The Transcription Factor C/EBP-β Mediates Constitutive and LPS-Inducible Transcription of Murine SerpinB2\nC/EBP-β Mediates SerpinB2 Transcription\n\nAbstract\nSerpinB2 or plasminogen activator inhibitor type 2 (PAI-2) is highly induced in macrophages in response to inflammatory stim"}
sentences
{"project":"sentences","denotations":[{"id":"T99","span":{"begin":0,"end":105},"obj":"Sentence"},{"id":"T1","span":{"begin":0,"end":105},"obj":"Sentence"},{"id":"T2","span":{"begin":106,"end":145},"obj":"Sentence"},{"id":"T3","span":{"begin":147,"end":155},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"The Transcription Factor C/EBP-β Mediates Constitutive and LPS-Inducible Transcription of Murine SerpinB2\nC/EBP-β Mediates SerpinB2 Transcription\n\nAbstract\nSerpinB2 or plasminogen activator inhibitor type 2 (PAI-2) is highly induced in macrophages in response to inflammatory stim"}
simple1
{"project":"simple1","denotations":[{"id":"T210","span":{"begin":25,"end":32},"obj":"Protein"},{"id":"T212","span":{"begin":156,"end":164},"obj":"Protein"},{"id":"T213","span":{"begin":168,"end":206},"obj":"Protein"},{"id":"T214","span":{"begin":208,"end":213},"obj":"Protein"},{"id":"T211","span":{"begin":97,"end":105},"obj":"Protein"}],"text":"The Transcription Factor C/EBP-β Mediates Constitutive and LPS-Inducible Transcription of Murine SerpinB2\nC/EBP-β Mediates SerpinB2 Transcription\n\nAbstract\nSerpinB2 or plasminogen activator inhibitor type 2 (PAI-2) is highly induced in macrophages in response to inflammatory stim"}
BioNLP16_DUT
{"project":"BioNLP16_DUT","denotations":[{"id":"T510","span":{"begin":59,"end":72},"obj":"Positive_regulation"},{"id":"T511","span":{"begin":73,"end":86},"obj":"Transcription"},{"id":"T512","span":{"begin":225,"end":232},"obj":"Positive_regulation"},{"id":"T491","span":{"begin":25,"end":32},"obj":"Protein"},{"id":"T492","span":{"begin":97,"end":105},"obj":"Protein"},{"id":"T493","span":{"begin":156,"end":164},"obj":"Protein"},{"id":"T494","span":{"begin":168,"end":206},"obj":"Protein"},{"id":"T495","span":{"begin":208,"end":213},"obj":"Protein"}],"relations":[{"id":"R307","pred":"themeOf","subj":"T511","obj":"T510"},{"id":"R676","pred":"themeOf","subj":"T492","obj":"T511"},{"id":"R677","pred":"themeOf","subj":"T493","obj":"T512"},{"id":"R678","pred":"themeOf","subj":"T494","obj":"T512"},{"id":"R679","pred":"themeOf","subj":"T495","obj":"T512"}],"text":"The Transcription Factor C/EBP-β Mediates Constitutive and LPS-Inducible Transcription of Murine SerpinB2\nC/EBP-β Mediates SerpinB2 Transcription\n\nAbstract\nSerpinB2 or plasminogen activator inhibitor type 2 (PAI-2) is highly induced in macrophages in response to inflammatory stim"}
BioNLP16_Messiy
{"project":"BioNLP16_Messiy","denotations":[{"id":"T601","span":{"begin":25,"end":32},"obj":"Protein"},{"id":"T602","span":{"begin":97,"end":105},"obj":"Protein"},{"id":"T620","span":{"begin":73,"end":86},"obj":"Transcription"},{"id":"T621","span":{"begin":33,"end":41},"obj":"Positive_regulation"},{"id":"T603","span":{"begin":156,"end":164},"obj":"Protein"},{"id":"T604","span":{"begin":168,"end":206},"obj":"Protein"},{"id":"T605","span":{"begin":208,"end":213},"obj":"Protein"},{"id":"T622","span":{"begin":225,"end":232},"obj":"Positive_regulation"}],"relations":[{"id":"R694","pred":"causeOf","subj":"T601","obj":"T621"},{"id":"R715","pred":"themeOf","subj":"T602","obj":"T620"},{"id":"R717","pred":"themeOf","subj":"T604","obj":"T622"},{"id":"R732","pred":"themeOf","subj":"T620","obj":"T621"}],"text":"The Transcription Factor C/EBP-β Mediates Constitutive and LPS-Inducible Transcription of Murine SerpinB2\nC/EBP-β Mediates SerpinB2 Transcription\n\nAbstract\nSerpinB2 or plasminogen activator inhibitor type 2 (PAI-2) is highly induced in macrophages in response to inflammatory stim"}
DLUT931
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bionlp-st-ge-2016-test-ihmc
{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T749","span":{"begin":87,"end":105},"obj":"Protein"},{"id":"T758","span":{"begin":59,"end":105},"obj":"Transcription"},{"id":"T731","span":{"begin":0,"end":32},"obj":"Protein"},{"id":"T723","span":{"begin":236,"end":247},"obj":"Entity"},{"id":"T739","span":{"begin":208,"end":213},"obj":"Protein"},{"id":"T740","span":{"begin":156,"end":214},"obj":"Protein"},{"id":"T744","span":{"begin":168,"end":214},"obj":"Protein"}],"relations":[{"id":"R349","pred":"themeOf","subj":"T749","obj":"T758"}],"text":"The Transcription Factor C/EBP-β Mediates Constitutive and LPS-Inducible Transcription of Murine SerpinB2\nC/EBP-β Mediates SerpinB2 Transcription\n\nAbstract\nSerpinB2 or plasminogen activator inhibitor type 2 (PAI-2) is highly induced in macrophages in response to inflammatory stim"}
bionlp-st-ge-2016-test-tees
{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T643","span":{"begin":225,"end":232},"obj":"Positive_regulation"},{"id":"T642","span":{"begin":225,"end":232},"obj":"Positive_regulation"},{"id":"T640","span":{"begin":208,"end":213},"obj":"Protein"},{"id":"T635","span":{"begin":4,"end":32},"obj":"Protein"},{"id":"T636","span":{"begin":90,"end":105},"obj":"Protein"},{"id":"T637","span":{"begin":73,"end":86},"obj":"Transcription"},{"id":"T638","span":{"begin":33,"end":41},"obj":"Positive_regulation"},{"id":"T639","span":{"begin":168,"end":206},"obj":"Protein"}],"relations":[{"id":"R322","pred":"themeOf","subj":"T640","obj":"T643"},{"id":"R703","pred":"causeOf","subj":"T635","obj":"T638"},{"id":"R704","pred":"themeOf","subj":"T636","obj":"T637"},{"id":"R705","pred":"themeOf","subj":"T637","obj":"T638"},{"id":"R706","pred":"themeOf","subj":"T639","obj":"T642"}],"text":"The Transcription Factor C/EBP-β Mediates Constitutive and LPS-Inducible Transcription of Murine SerpinB2\nC/EBP-β Mediates SerpinB2 Transcription\n\nAbstract\nSerpinB2 or plasminogen activator inhibitor type 2 (PAI-2) is highly induced in macrophages in response to inflammatory stim"}
testone
{"project":"testone","denotations":[{"id":"T20","span":{"begin":25,"end":32},"obj":"Protein"},{"id":"T21","span":{"begin":97,"end":105},"obj":"Protein"},{"id":"T24","span":{"begin":208,"end":213},"obj":"Protein"},{"id":"T23","span":{"begin":168,"end":206},"obj":"Protein"},{"id":"T22","span":{"begin":156,"end":164},"obj":"Protein"}],"relations":[{"id":"R1","pred":"equivalentTo","subj":"T24","obj":"T23"}],"text":"The Transcription Factor C/EBP-β Mediates Constitutive and LPS-Inducible Transcription of Murine SerpinB2\nC/EBP-β Mediates SerpinB2 Transcription\n\nAbstract\nSerpinB2 or plasminogen activator inhibitor type 2 (PAI-2) is highly induced in macrophages in response to inflammatory stim"}
test3
{"project":"test3","denotations":[{"id":"T49","span":{"begin":25,"end":32},"obj":"Protein"},{"id":"T50","span":{"begin":97,"end":105},"obj":"Protein"},{"id":"T68","span":{"begin":25,"end":32},"obj":"Protein"},{"id":"T69","span":{"begin":97,"end":105},"obj":"Protein"},{"id":"T73","span":{"begin":225,"end":232},"obj":"Positive_regulation"},{"id":"T72","span":{"begin":208,"end":213},"obj":"Protein"},{"id":"T71","span":{"begin":168,"end":206},"obj":"Protein"},{"id":"T70","span":{"begin":156,"end":164},"obj":"Protein"},{"id":"T53","span":{"begin":208,"end":213},"obj":"Protein"},{"id":"T52","span":{"begin":168,"end":206},"obj":"Protein"},{"id":"T51","span":{"begin":156,"end":164},"obj":"Protein"}],"relations":[{"id":"R15","pred":"themeOf","subj":"T71","obj":"T73"},{"id":"R16","pred":"equivalentTo","subj":"T72","obj":"T71"}],"text":"The Transcription Factor C/EBP-β Mediates Constitutive and LPS-Inducible Transcription of Murine SerpinB2\nC/EBP-β Mediates SerpinB2 Transcription\n\nAbstract\nSerpinB2 or plasminogen activator inhibitor type 2 (PAI-2) is highly induced in macrophages in response to inflammatory stim"}