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PMC:340383 / 15226-15854 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T3743 343-346 DT denotes the
T3742 340-342 IN denotes as
T3741 335-339 JJ denotes such
T3740 333-335 , denotes ,
T3739 319-324 NN denotes Amip3
T3738 313-318 NN denotes yeast
T3737 309-312 CC denotes and
T3736 325-333 NN denotes proteins
T3735 304-308 NN denotes CorC
T3734 295-303 NNS denotes bacteria
T3733 292-294 IN denotes in
T3732 282-285 VBP denotes are
T3731 286-291 VBN denotes found
T3730 277-281 WDT denotes that
T3729 269-276 NNS denotes domains
T3728 265-268 DT denotes the
T3727 252-256 RB denotes also
T3726 243-251 NN denotes proteins
T3725 257-264 VBP denotes possess
T3724 238-242 NN denotes Acdp
T3723 237-399 sentence denotes Acdp proteins also possess the domains that are found in bacteria CorC and yeast Amip3 proteins, such as the CBS domains, DUF21 domain and transmembrane domains.
T3722 236-237 . denotes .
T3721 228-236 NN denotes toxicity
T3720 221-227 NN denotes copper
T3719 218-220 IN denotes to
T3718 208-217 NN denotes resistant
T3717 201-207 VBP denotes confer
T3716 193-200 NNS denotes mutants
T3715 187-192 NN denotes Amip3
T3714 186-237 sentence denotes Amip3 mutants confer resistant to copper toxicity.
T3713 185-186 . denotes .
T3712 177-185 NNS denotes bacteria
T3711 174-176 IN denotes in
T3710 167-173 NN denotes cobalt
T3709 163-166 CC denotes and
T3708 153-162 NN denotes magnesium
T3707 150-152 IN denotes of
T3706 143-149 NN denotes efflux
T3705 140-142 IN denotes in
T3704 128-130 VBZ denotes is
T3703 131-139 VBN denotes involved
T3702 122-127 WDT denotes which
T3701 114-121 NN denotes protein
T3700 109-113 NN denotes CorC
T3699 106-108 IN denotes to
T3698 95-105 JJ denotes homologous
T3697 93-94 DT denotes a
T3696 90-92 VB denotes be
T3695 87-89 TO denotes to
T3694 79-86 VBZ denotes appears
T3693 73-78 NN denotes Amip3
T3692 72-186 sentence denotes Amip3 appears to be a homologous to CorC protein which is involved in efflux of magnesium and cobalt in bacteria.
T3691 71-72 . denotes .
T3690 70-71 -RRB- denotes ]
T3689 69-70 CD denotes 9
T3688 68-69 -LRB- denotes [
T3687 59-67 NN denotes toxicity
T3686 52-58 NN denotes cobalt
T3685 49-51 IN denotes to
T3684 38-48 NN denotes resistance
T3683 23-30 NNS denotes mutants
T3682 18-22 NN denotes CorA
T3681 31-37 VBP denotes confer
T3680 13-17 IN denotes that
T3679 2-6 VBN denotes been
T3677 7-12 VBN denotes shown
T3804 622-624 VBZ denotes is
T3803 616-621 NN denotes Acdp1
T3801 611-615 IN denotes that
T3800 600-604 VBP denotes have
T3799 597-599 PRP denotes we
T3798 595-597 , denotes ,
T3797 578-579 HYPH denotes -
T3796 579-587 JJ denotes terminal
T3795 577-578 NN denotes C
T3794 588-595 NN denotes peptide
T3793 571-576 NN denotes Acdp1
T3792 568-570 IN denotes by
T3791 559-567 VBN denotes produced
T3790 550-558 NN denotes antibody
T3789 605-610 VBN denotes shown
T3788 544-549 VBG denotes Using
T3786 542-543 . denotes .
T3785 541-542 -RRB- denotes ]
T3784 539-541 CD denotes 13
T3783 538-539 SYM denotes -
T3782 536-538 CD denotes 10
T3781 535-536 -LRB- denotes [
T3780 517-526 JJ denotes dependent
T3779 516-517 HYPH denotes -
T3778 527-534 NNS denotes kinases
T3777 512-516 NN denotes cNMP
T3776 508-511 CC denotes and
T3775 499-507 NNS denotes channels
T3774 495-498 NN denotes ion
T3773 492-494 IN denotes in
T3772 484-491 JJ denotes present
T3771 476-483 RB denotes usually
T3770 473-475 VBZ denotes is
T3769 467-472 WDT denotes which
T3768 465-467 , denotes ,
T3767 452-456 NN denotes Acdp
T3766 457-465 NN denotes proteins
T3765 448-451 DT denotes all
T3764 445-447 IN denotes in
T3763 435-438 VBD denotes was
T3762 419-420 HYPH denotes -
T3761 420-427 VBG denotes binding
T3760 415-419 NN denotes cNMP
T3759 428-434 NN denotes domain
T3758 413-414 DT denotes a
T3757 411-413 , denotes ,
T3756 403-411 NN denotes addition
T3755 439-444 VBN denotes found
T3754 400-402 IN denotes In
T3753 399-543 sentence denotes In addition, a cNMP-binding domain was found in all Acdp proteins, which is usually present in ion channels and cNMP-dependent kinases [10-13].
T3752 398-399 . denotes .
T3751 391-398 NNS denotes domains
T3750 377-390 NN denotes transmembrane
T3749 373-376 CC denotes and
T3748 366-372 NN denotes domain
T3747 360-365 NN denotes DUF21
T3746 358-360 , denotes ,
T3745 347-350 NN denotes CBS
T3744 351-358 NNS denotes domains
R2112 T3679 T3677 auxpass been,shown
R2113 T3680 T3681 mark that,confer
R2114 T3681 T3677 ccomp confer,shown
R2115 T3682 T3683 compound CorA,mutants
R2116 T3683 T3681 nsubj mutants,confer
R2117 T3684 T3681 dobj resistance,confer
R2118 T3685 T3684 prep to,resistance
R2119 T3686 T3687 compound cobalt,toxicity
R2120 T3687 T3685 pobj toxicity,to
R2121 T3688 T3689 punct [,9
R2122 T3689 T3677 parataxis 9,shown
R2123 T3690 T3689 punct ],9
R2124 T3691 T3677 punct .,shown
R2125 T3693 T3694 nsubj Amip3,appears
R2126 T3695 T3696 aux to,be
R2127 T3696 T3694 xcomp be,appears
R2128 T3697 T3698 det a,homologous
R2129 T3698 T3696 attr homologous,be
R2130 T3699 T3698 prep to,homologous
R2131 T3700 T3701 compound CorC,protein
R2132 T3701 T3699 pobj protein,to
R2133 T3702 T3703 dep which,involved
R2134 T3703 T3701 relcl involved,protein
R2135 T3704 T3703 auxpass is,involved
R2136 T3705 T3703 prep in,involved
R2137 T3706 T3705 pobj efflux,in
R2138 T3707 T3706 prep of,efflux
R2139 T3708 T3707 pobj magnesium,of
R2140 T3709 T3708 cc and,magnesium
R2141 T3710 T3708 conj cobalt,magnesium
R2142 T3711 T3703 prep in,involved
R2143 T3712 T3711 pobj bacteria,in
R2144 T3713 T3694 punct .,appears
R2145 T3715 T3716 compound Amip3,mutants
R2146 T3716 T3717 nsubj mutants,confer
R2147 T3718 T3717 dobj resistant,confer
R2148 T3719 T3718 prep to,resistant
R2149 T3720 T3721 compound copper,toxicity
R2150 T3721 T3719 pobj toxicity,to
R2151 T3722 T3717 punct .,confer
R2152 T3724 T3725 nsubj Acdp,possess
R2153 T3726 T3725 dep proteins,possess
R2154 T3727 T3725 advmod also,possess
R2155 T3728 T3729 det the,domains
R2156 T3729 T3725 dobj domains,possess
R2157 T3730 T3731 dep that,found
R2158 T3731 T3729 relcl found,domains
R2159 T3732 T3731 auxpass are,found
R2160 T3733 T3731 prep in,found
R2161 T3734 T3735 nmod bacteria,CorC
R2162 T3735 T3736 nmod CorC,proteins
R2163 T3736 T3733 pobj proteins,in
R2164 T3737 T3735 cc and,CorC
R2165 T3738 T3739 compound yeast,Amip3
R2166 T3739 T3735 conj Amip3,CorC
R2167 T3740 T3729 punct ", ",domains
R2168 T3741 T3742 amod such,as
R2169 T3742 T3729 prep as,domains
R2170 T3743 T3744 det the,domains
R2171 T3744 T3742 pobj domains,as
R2172 T3745 T3744 compound CBS,domains
R2173 T3746 T3744 punct ", ",domains
R2174 T3747 T3748 compound DUF21,domain
R2175 T3748 T3744 conj domain,domains
R2176 T3749 T3748 cc and,domain
R2177 T3750 T3751 compound transmembrane,domains
R2178 T3751 T3748 conj domains,domain
R2179 T3752 T3725 punct .,possess
R2180 T3754 T3755 prep In,found
R2181 T3756 T3754 pobj addition,In
R2182 T3757 T3755 punct ", ",found
R2183 T3758 T3759 det a,domain
R2184 T3759 T3755 nsubjpass domain,found
R2185 T3760 T3761 npadvmod cNMP,binding
R2186 T3761 T3759 amod binding,domain
R2187 T3762 T3761 punct -,binding
R2188 T3763 T3755 auxpass was,found
R2189 T3764 T3755 prep in,found
R2190 T3765 T3766 det all,proteins
R2191 T3766 T3764 pobj proteins,in
R2192 T3767 T3766 compound Acdp,proteins
R2193 T3768 T3755 punct ", ",found
R2194 T3769 T3770 dep which,is
R2195 T3770 T3755 ccomp is,found
R2196 T3771 T3770 advmod usually,is
R2197 T3772 T3770 acomp present,is
R2198 T3773 T3770 prep in,is
R2199 T3774 T3775 compound ion,channels
R2200 T3775 T3773 pobj channels,in
R2201 T3776 T3775 cc and,channels
R2202 T3777 T3778 nmod cNMP,kinases
R2203 T3778 T3775 conj kinases,channels
R2204 T3779 T3777 punct -,cNMP
R2205 T3780 T3777 amod dependent,cNMP
R2206 T3781 T3782 punct [,10
R2207 T3782 T3755 parataxis 10,found
R2208 T3783 T3784 punct -,13
R2209 T3784 T3782 prep 13,10
R2210 T3785 T3782 punct ],10
R2211 T3786 T3755 punct .,found
R2212 T3788 T3789 advcl Using,shown
R2213 T3790 T3788 dobj antibody,Using
R2214 T3791 T3790 acl produced,antibody
R2215 T3792 T3791 agent by,produced
R2216 T3793 T3794 nmod Acdp1,peptide
R2217 T3794 T3792 pobj peptide,by
R2218 T3795 T3796 npadvmod C,terminal
R2219 T3796 T3794 amod terminal,peptide
R2220 T3797 T3796 punct -,terminal
R2221 T3798 T3789 punct ", ",shown
R2222 T3799 T3789 nsubj we,shown
R2223 T3800 T3789 aux have,shown

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T3408 616-621 PR:000005643 denotes Acdp1
T3407 571-576 PR:000005643 denotes Acdp1
T3406 550-558 GO:0042571 denotes antibody
T3405 495-498 CHEBI:24870 denotes ion
T3404 428-434 SO:0000417 denotes domain
T3403 391-398 SO:0000417 denotes domains
T3402 382-390 GO:0016020 denotes membrane
T3401 366-372 SO:0000417 denotes domain
T3400 351-358 SO:0000417 denotes domains
T3399 304-308 PR:000022321 denotes CorC
T3398 295-303 NCBITaxon:2 denotes bacteria
T3397 269-276 SO:0000417 denotes domains
T3396 177-185 NCBITaxon:2 denotes bacteria
T3395 109-113 PR:000022321 denotes CorC
T3394 95-105 SO:0000857 denotes homologous
T3393 18-22 PR:000022320 denotes CorA

2_test

Id Subject Object Predicate Lexical cue
14723793-1779764-10642190 69-70 1779764 denotes 9
14723793-3947356-10642191 536-538 3947356 denotes 10
14723793-1313416-10642191 536-538 1313416 denotes 10
14723793-1710853-10642191 536-538 1710853 denotes 10
14723793-2550070-10642191 536-538 2550070 denotes 10

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T3494 616-621 PR_EXT:000005643 denotes Acdp1
T3493 588-595 CHEBI_SO_EXT:peptide_or_peptide_region denotes peptide
T3492 577-587 CHEBI_SO_EXT:C_terminus_or_C_terminal_region denotes C-terminal
T3491 571-576 PR_EXT:000005643 denotes Acdp1
T3490 550-558 GO:0042571 denotes antibody
T3489 527-534 GO_EXT:0016301 denotes kinases
T3488 495-507 GO_EXT:0005216 denotes ion channels
T3487 495-498 CHEBI:24870 denotes ion
T3486 457-465 CHEBI_PR_EXT:protein denotes proteins
T3485 452-456 PR_EXT:ACDP_or_CNNM denotes Acdp
T3484 428-434 SO_EXT:0000417 denotes domain
T3483 420-427 CHEMINF_GO_EXT:chemical_binding_or_bond_formation denotes binding
T3482 391-398 SO_EXT:0000417 denotes domains
T3481 382-390 GO:0016020 denotes membrane
T3480 366-372 SO_EXT:0000417 denotes domain
T3479 351-358 SO_EXT:0000417 denotes domains
T3478 325-333 CHEBI_PR_EXT:protein denotes proteins
T3477 313-318 NCBITaxon_EXT:yeast denotes yeast
T3476 304-308 PR_EXT:000022321 denotes CorC
T3475 295-303 NCBITaxon:2 denotes bacteria
T3474 269-276 SO_EXT:0000417 denotes domains
T3473 243-251 CHEBI_PR_EXT:protein denotes proteins
T3472 238-242 PR_EXT:ACDP_or_CNNM denotes Acdp
T3471 221-227 CHEBI_EXT:copper denotes copper
T3470 193-200 SO_EXT:sequence_altered_entity denotes mutants
T3469 177-185 NCBITaxon:2 denotes bacteria
T3468 167-173 CHEBI_EXT:cobalt denotes cobalt
T3467 153-162 CHEBI_EXT:magnesium denotes magnesium
T3466 114-121 CHEBI_PR_EXT:protein denotes protein
T3465 109-113 PR_EXT:000022321 denotes CorC
T3464 95-105 SO:0000857 denotes homologous
T3463 52-58 CHEBI_EXT:cobalt denotes cobalt
T3462 23-30 SO_EXT:sequence_altered_entity denotes mutants
T3461 18-22 PR_EXT:000022320 denotes CorA