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PMC:3342329 / 699-881 JSONTXT

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test3

Id Subject Object Predicate Lexical cue
T99 160-164 Protein denotes CCR5
T98 100-115 Phosphorylation denotes phosphorylation
T97 86-96 Negative_regulation denotes inhibition
T96 66-73 Entity denotes nucleus
T95 53-56 Protein denotes p65
T94 45-48 Protein denotes p50
T93 28-41 Localization denotes translocation
T70 160-164 Protein denotes CCR5
T69 53-56 Protein denotes p65
T68 45-48 Protein denotes p50
R19 T94 T93 themeOf p50,translocation
R20 T95 T93 themeOf p65,translocation
R21 T96 T93 locationOf nucleus,translocation
R22 T98 T97 themeOf phosphorylation,inhibition

testone

Id Subject Object Predicate Lexical cue
T34 160-164 Protein denotes CCR5
T33 53-56 Protein denotes p65
T32 45-48 Protein denotes p50
T52 100-115 Phosphorylation denotes phosphorylation
T51 66-73 Entity denotes nucleus
T50 28-41 Localization denotes translocation
R5 T32 T50 themeOf p50,translocation
R6 T33 T50 themeOf p65,translocation
R12 T51 T50 locationOf nucleus,translocation

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T641 28-41 Localization denotes translocation
T626 160-164 Protein denotes CCR5
T625 53-56 Protein denotes p65
T624 45-48 Protein denotes p50
R342 T624 T641 themeOf p50,translocation
R343 T625 T641 themeOf p65,translocation

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T767 28-41 Localization denotes translocation
T752 160-164 Protein denotes CCR5
T751 53-56 Protein denotes p65
T750 45-48 Protein denotes p50
R411 T750 T767 themeOf p50,translocation
R412 T751 T767 themeOf p65,translocation

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T395 173-181 VB denotes compared
T394 168-172 NN denotes mice
T393 160-167 NN denotes CCR5−/−
T392 157-159 IN denotes of
T391 149-156 NN denotes tissues
T390 140-148 NN denotes melanoma
T389 136-139 DT denotes the
T388 133-135 IN denotes in
T387 127-132 VB denotes found
T386 123-126 VB denotes was
T385 119-122 NN denotes IκB
T384 116-118 IN denotes of
T383 100-115 NN denotes phosphorylation
T382 97-99 IN denotes of
T381 86-96 NN denotes inhibition
T380 82-85 DT denotes the
T379 74-81 IN denotes through
T378 66-73 NN denotes nucleus
T377 62-65 DT denotes the
T376 57-61 IN denotes into
T375 53-56 NN denotes p65
T374 49-52 CC denotes and
T373 45-48 NN denotes p50
T372 42-44 IN denotes of
T371 28-41 NN denotes translocation
T370 24-27 CC denotes and
T369 22-23 -COMMA- denotes ,
T368 17-22 NN denotes NF-κB
T367 14-16 IN denotes of
T366 5-13 NN denotes activity
R148 T366 T367 arg1Of activity,of
R149 T368 T367 arg2Of NF-κB,of
R150 T370 T369 arg1Of and,","
R151 T370 T379 arg1Of and,through
R152 T370 T386 arg1Of and,was
R153 T370 T387 arg2Of and,found
R154 T371 T370 arg2Of translocation,and
R155 T371 T372 arg1Of translocation,of
R156 T371 T376 arg1Of translocation,into
R157 T373 T374 arg1Of p50,and
R158 T374 T372 arg2Of and,of
R159 T375 T374 arg2Of p65,and
R160 T378 T376 arg2Of nucleus,into
R161 T378 T377 arg1Of nucleus,the
R162 T381 T379 arg2Of inhibition,through
R163 T381 T380 arg1Of inhibition,the
R164 T381 T382 arg1Of inhibition,of
R165 T383 T382 arg2Of phosphorylation,of
R166 T383 T384 arg1Of phosphorylation,of
R167 T385 T384 arg2Of IκB,of
R168 T387 T386 arg2Of found,was
R169 T387 T388 arg1Of found,in
R170 T387 T395 arg1Of found,compared
R171 T391 T388 arg2Of tissues,in
R172 T391 T389 arg1Of tissues,the
R173 T391 T390 arg1Of tissues,melanoma
R174 T391 T392 arg1Of tissues,of
R175 T394 T392 arg2Of mice,of
R176 T394 T393 arg1Of mice,CCR5−/−

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T176 160-164 Protein denotes CCR5
T175 53-56 Protein denotes p65
T174 45-48 Protein denotes p50

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T550 53-56 http://www.uniprot.org/uniprot/P21579 denotes p65
T549 53-56 http://www.uniprot.org/uniprot/Q04206 denotes p65
T548 45-48 http://www.uniprot.org/uniprot/P19838 denotes p50
T540 160-164 http://www.uniprot.org/uniprot/P51681 denotes CCR5

UBERON-AE

Id Subject Object Predicate Lexical cue
T113 149-156 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissues

GO-BP

Id Subject Object Predicate Lexical cue
T207 100-122 http://purl.obolibrary.org/obo/GO_0007252 denotes phosphorylation of IκB
T206 100-115 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation
T205 86-122 http://purl.obolibrary.org/obo/GO_1903720 denotes inhibition of phosphorylation of IκB
T204 86-115 http://purl.obolibrary.org/obo/GO_0042326 denotes inhibition of phosphorylation

GO-CC

Id Subject Object Predicate Lexical cue
T213 66-73 http://purl.obolibrary.org/obo/GO_0005634 denotes nucleus

simple1

Id Subject Object Predicate Lexical cue
T249 160-164 Protein denotes CCR5
T248 53-56 Protein denotes p65
T247 45-48 Protein denotes p50

DLUT931

Id Subject Object Predicate Lexical cue
T581 86-96 Negative_regulation denotes inhibition
T580 28-41 Localization denotes translocation
T566 160-164 Protein denotes CCR5
T565 53-56 Protein denotes p65
T564 45-48 Protein denotes p50
R318 T564 T580 themeOf p50,translocation
R319 T565 T580 themeOf p65,translocation
R324 T580 T581 themeOf translocation,inhibition
R325 T580 T581 themeOf translocation,inhibition

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T801 168-172 Protein denotes mice
T791 53-56 Protein denotes p65
T780 62-73 Entity denotes the nucleus
T777 14-22 Protein denotes of NF-κB
T775 45-48 Protein denotes p50

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T975 173-181 VBN denotes compared
T974 168-172 NNS denotes mice
T973 166-167 NN denotes −
T972 165-166 NN denotes /
T971 164-165 CD denotes −
T970 160-164 CD denotes CCR5
T969 157-159 IN denotes of
T968 149-156 NNS denotes tissues
T967 140-148 NN denotes melanoma
T966 136-139 DT denotes the
T965 133-135 IN denotes in
T964 127-132 VBN denotes found
T963 123-126 VBD denotes was
T962 119-122 NNP denotes IκB
T961 116-118 IN denotes of
T960 100-115 NN denotes phosphorylation
T959 97-99 IN denotes of
T958 86-96 NN denotes inhibition
T957 82-85 DT denotes the
T956 74-81 IN denotes through
T955 66-73 NN denotes nucleus
T954 62-65 DT denotes the
T953 57-61 IN denotes into
T952 53-56 CD denotes p65
T951 49-52 CC denotes and
T950 45-48 CD denotes p50
T949 42-44 IN denotes of
T948 28-41 NN denotes translocation
T947 24-27 CC denotes and
T946 22-23 , denotes ,
T945 17-22 NNP denotes NF-κB
T944 14-16 IN denotes of
T943 5-13 NN denotes activity
R549 T944 T943 prep of,activity
R550 T945 T944 pobj NF-κB,of
R551 T946 T943 punct ",",activity
R552 T947 T943 cc and,activity
R553 T948 T943 conj translocation,activity
R554 T949 T948 prep of,translocation
R555 T950 T949 pobj p50,of
R556 T951 T950 cc and,p50
R557 T952 T950 conj p65,p50
R559 T954 T955 det the,nucleus
R560 T955 T953 pobj nucleus,into
R562 T957 T958 det the,inhibition
R563 T958 T956 pobj inhibition,through
R564 T959 T958 prep of,inhibition
R565 T960 T959 pobj phosphorylation,of
R566 T961 T960 prep of,phosphorylation
R567 T962 T961 pobj IκB,of
R568 T963 T964 auxpass was,found
R569 T964 T964 ROOT found,found
R570 T965 T964 prep in,found
R571 T966 T968 det the,tissues
R572 T967 T968 compound melanoma,tissues
R573 T968 T965 pobj tissues,in
R574 T969 T968 prep of,tissues
R575 T970 T974 nummod CCR5,mice
R576 T971 T974 nummod −,mice
R577 T972 T974 compound /,mice
R578 T973 T974 compound −,mice
R579 T974 T969 pobj mice,of
R580 T975 T964 prep compared,found

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T668 86-96 Negative_regulation denotes inhibition
T667 86-96 Negative_regulation denotes inhibition
T666 86-96 Negative_regulation denotes inhibition
T665 28-41 Localization denotes translocation
T664 28-41 Localization denotes translocation
T662 100-115 Phosphorylation denotes phosphorylation
T661 66-73 Entity denotes nucleus
T659 119-122 Protein denotes IκB
T658 53-56 Protein denotes p65
T657 45-48 Protein denotes p50
T656 17-22 Protein denotes NF-κB
R353 T657 T664 themeOf p50,translocation
R354 T658 T665 themeOf p65,translocation
R355 T659 T662 themeOf IκB,phosphorylation
R357 T661 T664 locationOf nucleus,translocation
R358 T661 T665 locationOf nucleus,translocation
R359 T662 T668 themeOf phosphorylation,inhibition
R360 T664 T666 themeOf translocation,inhibition
R362 T665 T667 themeOf translocation,inhibition