PMC:3342329 / 631-1067 JSONTXT

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    test3

    {"project":"test3","denotations":[{"id":"T99","span":{"begin":228,"end":232},"obj":"Protein"},{"id":"T100","span":{"begin":273,"end":277},"obj":"Protein"},{"id":"T98","span":{"begin":168,"end":183},"obj":"Phosphorylation"},{"id":"T97","span":{"begin":154,"end":164},"obj":"Negative_regulation"},{"id":"T96","span":{"begin":134,"end":141},"obj":"Entity"},{"id":"T95","span":{"begin":121,"end":124},"obj":"Protein"},{"id":"T94","span":{"begin":113,"end":116},"obj":"Protein"},{"id":"T93","span":{"begin":96,"end":109},"obj":"Localization"},{"id":"T71","span":{"begin":273,"end":277},"obj":"Protein"},{"id":"T70","span":{"begin":228,"end":232},"obj":"Protein"},{"id":"T69","span":{"begin":121,"end":124},"obj":"Protein"},{"id":"T68","span":{"begin":113,"end":116},"obj":"Protein"}],"relations":[{"id":"R19","pred":"themeOf","subj":"T94","obj":"T93"},{"id":"R20","pred":"themeOf","subj":"T95","obj":"T93"},{"id":"R21","pred":"locationOf","subj":"T96","obj":"T93"},{"id":"R22","pred":"themeOf","subj":"T98","obj":"T97"}],"text":"owth, apoptosis, and tumor growth. Significant inhibition of DNA binding activity of NF-κB, and translocation of p50 and p65 into the nucleus through the inhibition of phosphorylation of IκB was found in the melanoma tissues of CCR5−/− mice compared to melanoma tissues of CCR5+/+ mice. NF-κB target apoptotic protein expression, such as cleaved caspase-3, cleaved PARP, and Bax, was elevated, whereas the survival protein expression le"}

    testone

    {"project":"testone","denotations":[{"id":"T35","span":{"begin":273,"end":277},"obj":"Protein"},{"id":"T34","span":{"begin":228,"end":232},"obj":"Protein"},{"id":"T33","span":{"begin":121,"end":124},"obj":"Protein"},{"id":"T32","span":{"begin":113,"end":116},"obj":"Protein"},{"id":"T54","span":{"begin":423,"end":433},"obj":"Gene_expression"},{"id":"T53","span":{"begin":338,"end":345},"obj":"Phosphorylation"},{"id":"T52","span":{"begin":168,"end":183},"obj":"Phosphorylation"},{"id":"T51","span":{"begin":134,"end":141},"obj":"Entity"},{"id":"T50","span":{"begin":96,"end":109},"obj":"Localization"},{"id":"T49","span":{"begin":65,"end":72},"obj":"Binding"},{"id":"T48","span":{"begin":47,"end":57},"obj":"Negative_regulation"}],"relations":[{"id":"R5","pred":"themeOf","subj":"T32","obj":"T50"},{"id":"R6","pred":"themeOf","subj":"T33","obj":"T50"},{"id":"R11","pred":"themeOf","subj":"T49","obj":"T48"},{"id":"R12","pred":"locationOf","subj":"T51","obj":"T50"}],"text":"owth, apoptosis, and tumor growth. Significant inhibition of DNA binding activity of NF-κB, and translocation of p50 and p65 into the nucleus through the inhibition of phosphorylation of IκB was found in the melanoma tissues of CCR5−/− mice compared to melanoma tissues of CCR5+/+ mice. NF-κB target apoptotic protein expression, such as cleaved caspase-3, cleaved PARP, and Bax, was elevated, whereas the survival protein expression le"}

    BioNLP16_Messiy

    {"project":"BioNLP16_Messiy","denotations":[{"id":"T642","span":{"begin":423,"end":433},"obj":"Gene_expression"},{"id":"T641","span":{"begin":96,"end":109},"obj":"Localization"},{"id":"T627","span":{"begin":273,"end":277},"obj":"Protein"},{"id":"T626","span":{"begin":228,"end":232},"obj":"Protein"},{"id":"T625","span":{"begin":121,"end":124},"obj":"Protein"},{"id":"T624","span":{"begin":113,"end":116},"obj":"Protein"}],"relations":[{"id":"R342","pred":"themeOf","subj":"T624","obj":"T641"},{"id":"R343","pred":"themeOf","subj":"T625","obj":"T641"}],"text":"owth, apoptosis, and tumor growth. Significant inhibition of DNA binding activity of NF-κB, and translocation of p50 and p65 into the nucleus through the inhibition of phosphorylation of IκB was found in the melanoma tissues of CCR5−/− mice compared to melanoma tissues of CCR5+/+ mice. NF-κB target apoptotic protein expression, such as cleaved caspase-3, cleaved PARP, and Bax, was elevated, whereas the survival protein expression le"}

    BioNLP16_DUT

    {"project":"BioNLP16_DUT","denotations":[{"id":"T769","span":{"begin":423,"end":433},"obj":"Gene_expression"},{"id":"T767","span":{"begin":96,"end":109},"obj":"Localization"},{"id":"T753","span":{"begin":273,"end":277},"obj":"Protein"},{"id":"T752","span":{"begin":228,"end":232},"obj":"Protein"},{"id":"T751","span":{"begin":121,"end":124},"obj":"Protein"},{"id":"T750","span":{"begin":113,"end":116},"obj":"Protein"}],"relations":[{"id":"R411","pred":"themeOf","subj":"T750","obj":"T767"},{"id":"R412","pred":"themeOf","subj":"T751","obj":"T767"}],"text":"owth, apoptosis, and tumor growth. Significant inhibition of DNA binding activity of NF-κB, and translocation of p50 and p65 into the nucleus through the inhibition of phosphorylation of IκB was found in the melanoma tissues of CCR5−/− mice compared to melanoma tissues of CCR5+/+ mice. NF-κB target apoptotic protein expression, such as cleaved caspase-3, cleaved PARP, and Bax, was elevated, whereas the survival protein expression le"}

    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T426","span":{"begin":423,"end":433},"obj":"NN"},{"id":"T425","span":{"begin":415,"end":422},"obj":"NN"},{"id":"T424","span":{"begin":406,"end":414},"obj":"NN"},{"id":"T423","span":{"begin":402,"end":405},"obj":"DT"},{"id":"T422","span":{"begin":394,"end":401},"obj":"IN"},{"id":"T421","span":{"begin":392,"end":393},"obj":"-COMMA-"},{"id":"T420","span":{"begin":384,"end":392},"obj":"VB"},{"id":"T419","span":{"begin":380,"end":383},"obj":"VB"},{"id":"T418","span":{"begin":378,"end":379},"obj":"-COMMA-"},{"id":"T417","span":{"begin":375,"end":378},"obj":"NN"},{"id":"T416","span":{"begin":371,"end":374},"obj":"CC"},{"id":"T415","span":{"begin":369,"end":370},"obj":"-COMMA-"},{"id":"T414","span":{"begin":365,"end":369},"obj":"NN"},{"id":"T413","span":{"begin":357,"end":364},"obj":"VB"},{"id":"T412","span":{"begin":355,"end":356},"obj":"-COMMA-"},{"id":"T411","span":{"begin":346,"end":355},"obj":"NN"},{"id":"T410","span":{"begin":338,"end":345},"obj":"VB"},{"id":"T409","span":{"begin":335,"end":337},"obj":"IN"},{"id":"T408","span":{"begin":330,"end":334},"obj":"JJ"},{"id":"T407","span":{"begin":328,"end":329},"obj":"-COMMA-"},{"id":"T406","span":{"begin":318,"end":328},"obj":"NN"},{"id":"T405","span":{"begin":310,"end":317},"obj":"NN"},{"id":"T404","span":{"begin":300,"end":309},"obj":"JJ"},{"id":"T403","span":{"begin":293,"end":299},"obj":"NN"},{"id":"T402","span":{"begin":287,"end":292},"obj":"NN"},{"id":"T401","span":{"begin":281,"end":285},"obj":"NN"},{"id":"T400","span":{"begin":273,"end":280},"obj":"JJ"},{"id":"T399","span":{"begin":270,"end":272},"obj":"IN"},{"id":"T398","span":{"begin":262,"end":269},"obj":"NN"},{"id":"T397","span":{"begin":253,"end":261},"obj":"NN"},{"id":"T396","span":{"begin":250,"end":252},"obj":"TO"},{"id":"T395","span":{"begin":241,"end":249},"obj":"VB"},{"id":"T394","span":{"begin":236,"end":240},"obj":"NN"},{"id":"T393","span":{"begin":228,"end":235},"obj":"NN"},{"id":"T392","span":{"begin":225,"end":227},"obj":"IN"},{"id":"T391","span":{"begin":217,"end":224},"obj":"NN"},{"id":"T390","span":{"begin":208,"end":216},"obj":"NN"},{"id":"T389","span":{"begin":204,"end":207},"obj":"DT"},{"id":"T388","span":{"begin":201,"end":203},"obj":"IN"},{"id":"T387","span":{"begin":195,"end":200},"obj":"VB"},{"id":"T386","span":{"begin":191,"end":194},"obj":"VB"},{"id":"T385","span":{"begin":187,"end":190},"obj":"NN"},{"id":"T384","span":{"begin":184,"end":186},"obj":"IN"},{"id":"T383","span":{"begin":168,"end":183},"obj":"NN"},{"id":"T382","span":{"begin":165,"end":167},"obj":"IN"},{"id":"T381","span":{"begin":154,"end":164},"obj":"NN"},{"id":"T380","span":{"begin":150,"end":153},"obj":"DT"},{"id":"T379","span":{"begin":142,"end":149},"obj":"IN"},{"id":"T378","span":{"begin":134,"end":141},"obj":"NN"},{"id":"T377","span":{"begin":130,"end":133},"obj":"DT"},{"id":"T376","span":{"begin":125,"end":129},"obj":"IN"},{"id":"T375","span":{"begin":121,"end":124},"obj":"NN"},{"id":"T374","span":{"begin":117,"end":120},"obj":"CC"},{"id":"T373","span":{"begin":113,"end":116},"obj":"NN"},{"id":"T372","span":{"begin":110,"end":112},"obj":"IN"},{"id":"T371","span":{"begin":96,"end":109},"obj":"NN"},{"id":"T370","span":{"begin":92,"end":95},"obj":"CC"},{"id":"T369","span":{"begin":90,"end":91},"obj":"-COMMA-"},{"id":"T368","span":{"begin":85,"end":90},"obj":"NN"},{"id":"T367","span":{"begin":82,"end":84},"obj":"IN"},{"id":"T366","span":{"begin":73,"end":81},"obj":"NN"},{"id":"T365","span":{"begin":65,"end":72},"obj":"NN"},{"id":"T364","span":{"begin":61,"end":64},"obj":"NN"},{"id":"T363","span":{"begin":58,"end":60},"obj":"IN"},{"id":"T362","span":{"begin":47,"end":57},"obj":"NN"},{"id":"T361","span":{"begin":35,"end":46},"obj":"JJ"},{"id":"T360","span":{"begin":27,"end":33},"obj":"NN"},{"id":"T359","span":{"begin":21,"end":26},"obj":"NN"},{"id":"T358","span":{"begin":17,"end":20},"obj":"CC"},{"id":"T357","span":{"begin":15,"end":16},"obj":"-COMMA-"},{"id":"T356","span":{"begin":6,"end":15},"obj":"NN"},{"id":"T355","span":{"begin":4,"end":5},"obj":"-COMMA-"}],"relations":[{"id":"R136","pred":"arg1Of","subj":"T355","obj":"T358"},{"id":"R137","pred":"arg2Of","subj":"T356","obj":"T355"},{"id":"R139","pred":"arg1Of","subj":"T358","obj":"T357"},{"id":"R140","pred":"arg2Of","subj":"T360","obj":"T358"},{"id":"R141","pred":"arg1Of","subj":"T360","obj":"T359"},{"id":"R142","pred":"arg1Of","subj":"T362","obj":"T361"},{"id":"R143","pred":"arg1Of","subj":"T362","obj":"T363"},{"id":"R144","pred":"arg1Of","subj":"T362","obj":"T370"},{"id":"R145","pred":"arg2Of","subj":"T366","obj":"T363"},{"id":"R146","pred":"arg1Of","subj":"T366","obj":"T364"},{"id":"R147","pred":"arg1Of","subj":"T366","obj":"T365"},{"id":"R148","pred":"arg1Of","subj":"T366","obj":"T367"},{"id":"R149","pred":"arg2Of","subj":"T368","obj":"T367"},{"id":"R150","pred":"arg1Of","subj":"T370","obj":"T369"},{"id":"R151","pred":"arg1Of","subj":"T370","obj":"T379"},{"id":"R152","pred":"arg1Of","subj":"T370","obj":"T386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apoptosis, and tumor growth. Significant inhibition of DNA binding activity of NF-κB, and translocation of p50 and p65 into the nucleus through the inhibition of phosphorylation of IκB was found in the melanoma tissues of CCR5−/− mice compared to melanoma tissues of CCR5+/+ mice. NF-κB target apoptotic protein expression, such as cleaved caspase-3, cleaved PARP, and Bax, was elevated, whereas the survival protein expression le"}

    bionlp-st-ge-2016-test-proteins

    {"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T177","span":{"begin":273,"end":277},"obj":"Protein"},{"id":"T176","span":{"begin":228,"end":232},"obj":"Protein"},{"id":"T175","span":{"begin":121,"end":124},"obj":"Protein"},{"id":"T174","span":{"begin":113,"end":116},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"owth, apoptosis, and tumor growth. Significant inhibition of DNA binding activity of NF-κB, and translocation of p50 and p65 into the nucleus through the inhibition of phosphorylation of IκB was found in the melanoma tissues of CCR5−/− mice compared to melanoma tissues of CCR5+/+ mice. NF-κB target apoptotic protein expression, such as cleaved caspase-3, cleaved PARP, and Bax, was elevated, whereas the survival protein expression le"}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T551","span":{"begin":346,"end":355},"obj":"http://www.uniprot.org/uniprot/P42574"},{"id":"T550","span":{"begin":121,"end":124},"obj":"http://www.uniprot.org/uniprot/P21579"},{"id":"T549","span":{"begin":121,"end":124},"obj":"http://www.uniprot.org/uniprot/Q04206"},{"id":"T548","span":{"begin":113,"end":116},"obj":"http://www.uniprot.org/uniprot/P19838"},{"id":"T541","span":{"begin":273,"end":277},"obj":"http://www.uniprot.org/uniprot/P51681"},{"id":"T540","span":{"begin":228,"end":232},"obj":"http://www.uniprot.org/uniprot/P51681"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"owth, apoptosis, and tumor growth. Significant inhibition of DNA binding activity of NF-κB, and translocation of p50 and p65 into the nucleus through the inhibition of phosphorylation of IκB was found in the melanoma tissues of CCR5−/− mice compared to melanoma tissues of CCR5+/+ mice. NF-κB target apoptotic protein expression, such as cleaved caspase-3, cleaved PARP, and Bax, was elevated, whereas the survival protein expression le"}

    UBERON-AE

    {"project":"UBERON-AE","denotations":[{"id":"T114","span":{"begin":262,"end":269},"obj":"http://purl.obolibrary.org/obo/UBERON_0000479"},{"id":"T113","span":{"begin":217,"end":224},"obj":"http://purl.obolibrary.org/obo/UBERON_0000479"}],"text":"owth, apoptosis, and tumor growth. Significant inhibition of DNA binding activity of NF-κB, and translocation of p50 and p65 into the nucleus through the inhibition of phosphorylation of IκB was found in the melanoma tissues of CCR5−/− mice compared to melanoma tissues of CCR5+/+ mice. NF-κB target apoptotic protein expression, such as cleaved caspase-3, cleaved PARP, and Bax, was elevated, whereas the survival protein expression le"}

    GO-BP

    {"project":"GO-BP","denotations":[{"id":"T207","span":{"begin":168,"end":190},"obj":"http://purl.obolibrary.org/obo/GO_0007252"},{"id":"T206","span":{"begin":168,"end":183},"obj":"http://purl.obolibrary.org/obo/GO_0016310"},{"id":"T205","span":{"begin":154,"end":190},"obj":"http://purl.obolibrary.org/obo/GO_1903720"},{"id":"T204","span":{"begin":154,"end":183},"obj":"http://purl.obolibrary.org/obo/GO_0042326"},{"id":"T203","span":{"begin":47,"end":72},"obj":"http://purl.obolibrary.org/obo/GO_0039568"},{"id":"T202","span":{"begin":47,"end":72},"obj":"http://purl.obolibrary.org/obo/GO_1904743"},{"id":"T201","span":{"begin":47,"end":72},"obj":"http://purl.obolibrary.org/obo/GO_0043392"},{"id":"T200","span":{"begin":6,"end":15},"obj":"http://purl.obolibrary.org/obo/GO_0097194"},{"id":"T198","span":{"begin":6,"end":15},"obj":"http://purl.obolibrary.org/obo/GO_0006915"},{"id":"T190","span":{"begin":27,"end":33},"obj":"http://purl.obolibrary.org/obo/GO_0040007"}],"text":"owth, apoptosis, and tumor growth. Significant inhibition of DNA binding activity of NF-κB, and translocation of p50 and p65 into the nucleus through the inhibition of phosphorylation of IκB was found in the melanoma tissues of CCR5−/− mice compared to melanoma tissues of CCR5+/+ mice. NF-κB target apoptotic protein expression, such as cleaved caspase-3, cleaved PARP, and Bax, was elevated, whereas the survival protein expression le"}

    GO-MF

    {"project":"GO-MF","denotations":[{"id":"T214","span":{"begin":61,"end":72},"obj":"http://purl.obolibrary.org/obo/GO_0003677"},{"id":"T215","span":{"begin":65,"end":72},"obj":"http://purl.obolibrary.org/obo/GO_0005488"}],"text":"owth, apoptosis, and tumor growth. Significant inhibition of DNA binding activity of NF-κB, and translocation of p50 and p65 into the nucleus through the inhibition of phosphorylation of IκB was found in the melanoma tissues of CCR5−/− mice compared to melanoma tissues of CCR5+/+ mice. NF-κB target apoptotic protein expression, such as cleaved caspase-3, cleaved PARP, and Bax, was elevated, whereas the survival protein expression le"}

    GO-CC

    {"project":"GO-CC","denotations":[{"id":"T213","span":{"begin":134,"end":141},"obj":"http://purl.obolibrary.org/obo/GO_0005634"}],"text":"owth, apoptosis, and tumor growth. Significant inhibition of DNA binding activity of NF-κB, and translocation of p50 and p65 into the nucleus through the inhibition of phosphorylation of IκB was found in the melanoma tissues of CCR5−/− mice compared to melanoma tissues of CCR5+/+ mice. NF-κB target apoptotic protein expression, such as cleaved caspase-3, cleaved PARP, and Bax, was elevated, whereas the survival protein expression le"}

    sentences

    {"project":"sentences","denotations":[{"id":"T124","span":{"begin":35,"end":286},"obj":"Sentence"},{"id":"T7","span":{"begin":35,"end":286},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"owth, apoptosis, and tumor growth. Significant inhibition of DNA binding activity of NF-κB, and translocation of p50 and p65 into the nucleus through the inhibition of phosphorylation of IκB was found in the melanoma tissues of CCR5−/− mice compared to melanoma tissues of CCR5+/+ mice. NF-κB target apoptotic protein expression, such as cleaved caspase-3, cleaved PARP, and Bax, was elevated, whereas the survival protein expression le"}

    simple1

    {"project":"simple1","denotations":[{"id":"T250","span":{"begin":273,"end":277},"obj":"Protein"},{"id":"T249","span":{"begin":228,"end":232},"obj":"Protein"},{"id":"T248","span":{"begin":121,"end":124},"obj":"Protein"},{"id":"T247","span":{"begin":113,"end":116},"obj":"Protein"}],"text":"owth, apoptosis, and tumor growth. Significant inhibition of DNA binding activity of NF-κB, and translocation of p50 and p65 into the nucleus through the inhibition of phosphorylation of IκB was found in the melanoma tissues of CCR5−/− mice compared to melanoma tissues of CCR5+/+ mice. NF-κB target apoptotic protein expression, such as cleaved caspase-3, cleaved PARP, and Bax, was elevated, whereas the survival protein expression le"}

    DLUT931

    {"project":"DLUT931","denotations":[{"id":"T582","span":{"begin":423,"end":433},"obj":"Gene_expression"},{"id":"T581","span":{"begin":154,"end":164},"obj":"Negative_regulation"},{"id":"T580","span":{"begin":96,"end":109},"obj":"Localization"},{"id":"T567","span":{"begin":273,"end":277},"obj":"Protein"},{"id":"T566","span":{"begin":228,"end":232},"obj":"Protein"},{"id":"T565","span":{"begin":121,"end":124},"obj":"Protein"},{"id":"T564","span":{"begin":113,"end":116},"obj":"Protein"}],"relations":[{"id":"R318","pred":"themeOf","subj":"T564","obj":"T580"},{"id":"R319","pred":"themeOf","subj":"T565","obj":"T580"},{"id":"R324","pred":"themeOf","subj":"T580","obj":"T581"},{"id":"R325","pred":"themeOf","subj":"T580","obj":"T581"}],"text":"owth, apoptosis, and tumor growth. Significant inhibition of DNA binding activity of NF-κB, and translocation of p50 and p65 into the nucleus through the inhibition of phosphorylation of IκB was found in the melanoma tissues of CCR5−/− mice compared to melanoma tissues of CCR5+/+ mice. NF-κB target apoptotic protein expression, such as cleaved caspase-3, cleaved PARP, and Bax, was elevated, whereas the survival protein expression le"}

    bionlp-st-ge-2016-test-ihmc

    {"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T819","span":{"begin":338,"end":370},"obj":"Protein_catabolism"},{"id":"T816","span":{"begin":415,"end":433},"obj":"Gene_expression"},{"id":"T813","span":{"begin":415,"end":422},"obj":"Protein"},{"id":"T810","span":{"begin":287,"end":292},"obj":"Protein"},{"id":"T808","span":{"begin":281,"end":285},"obj":"Protein"},{"id":"T805","span":{"begin":365,"end":369},"obj":"Protein"},{"id":"T801","span":{"begin":236,"end":240},"obj":"Protein"},{"id":"T799","span":{"begin":375,"end":378},"obj":"Protein"},{"id":"T795","span":{"begin":338,"end":370},"obj":"Protein"},{"id":"T791","span":{"begin":121,"end":124},"obj":"Protein"},{"id":"T782","span":{"begin":310,"end":317},"obj":"Protein"},{"id":"T780","span":{"begin":130,"end":141},"obj":"Entity"},{"id":"T777","span":{"begin":82,"end":90},"obj":"Protein"},{"id":"T775","span":{"begin":113,"end":116},"obj":"Protein"}],"relations":[{"id":"R421","pred":"themeOf","subj":"T795","obj":"T819"},{"id":"R424","pred":"themeOf","subj":"T813","obj":"T816"}],"text":"owth, apoptosis, and tumor growth. Significant inhibition of DNA binding activity of NF-κB, and translocation of p50 and p65 into the nucleus through the inhibition of phosphorylation of IκB was found in the melanoma tissues of CCR5−/− mice compared to melanoma tissues of CCR5+/+ mice. NF-κB target apoptotic protein expression, such as cleaved caspase-3, cleaved PARP, and Bax, was elevated, whereas the survival protein expression le"}

    bionlp-st-ge-2016-spacy-parsed

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