> top > docs > PMC:3342329 > spans > 6032-7233 > annotations

PMC:3342329 / 6032-7233 JSONTXT

Annnotations TAB JSON ListView MergeView

test3

Id Subject Object Predicate Lexical cue
T1394 1154-1158 Protein denotes CCR5
T1393 1135-1153 Protein denotes chemokine receptor
T1392 1121-1127 Protein denotes IL-1Ra
T1391 944-950 Protein denotes IL-1Ra
T1390 930-940 Gene_expression denotes expression
T1389 742-749 Negative_regulation denotes inhibit
T1388 719-727 Protein denotes icIL-1Ra
T1387 697-717 Protein denotes Intracellular IL-1Ra
T1386 640-649 Negative_regulation denotes deficient
T1385 633-639 Protein denotes IL-1Ra
T1384 620-629 Positive_regulation denotes prolonged
T1383 607-615 Positive_regulation denotes enhanced
T1382 584-587 Protein denotes p65
T1381 560-573 Localization denotes translocation
T1380 552-559 Entity denotes Nuclear
T1379 509-513 Protein denotes PU.1
T1378 448-460 Binding denotes interactions
T1377 404-414 Gene_expression denotes expression
T1376 392-398 Protein denotes IL-1Ra
T1375 378-388 Regulation denotes regulation
T1374 329-336 Regulation denotes effects
T1373 300-308 Negative_regulation denotes abrogate
T1372 290-296 Protein denotes IL-1Ra
T1371 180-186 Protein denotes IL-1Ra
T1370 148-150 Protein denotes KC
T1369 136-142 Protein denotes GM-CSF
T1368 130-134 Protein denotes IL-6
T1367 119-128 Protein denotes IL-1alpha
T1325 1154-1158 Protein denotes CCR5
T1324 1135-1153 Protein denotes chemokine receptor
T1323 1121-1127 Protein denotes IL-1Ra
T1322 944-950 Protein denotes IL-1Ra
T1321 719-727 Protein denotes icIL-1Ra
T1320 697-717 Protein denotes Intracellular IL-1Ra
T1319 633-639 Protein denotes IL-1Ra
T1318 584-587 Protein denotes p65
T1317 509-513 Protein denotes PU.1
T1316 392-398 Protein denotes IL-1Ra
T1315 290-296 Protein denotes IL-1Ra
T1314 180-186 Protein denotes IL-1Ra
T1313 148-150 Protein denotes KC
T1312 136-142 Protein denotes GM-CSF
T1311 130-134 Protein denotes IL-6
T1310 119-128 Protein denotes IL-1alpha
R786 T1376 T1377 themeOf IL-1Ra,expression
R787 T1377 T1375 themeOf expression,regulation
R788 T1380 T1381 locationOf Nuclear,translocation
R789 T1381 T1384 themeOf translocation,prolonged
R790 T1381 T1383 themeOf translocation,enhanced
R791 T1385 T1386 themeOf IL-1Ra,deficient
R792 T1386 T1384 causeOf deficient,prolonged
R793 T1387 T1389 causeOf Intracellular IL-1Ra,inhibit
R794 T1388 T1387 equivalentTo icIL-1Ra,Intracellular IL-1Ra
R795 T1391 T1390 themeOf IL-1Ra,expression

testone

Id Subject Object Predicate Lexical cue
T1278 930-940 Gene_expression denotes expression
T1277 742-749 Negative_regulation denotes inhibit
T1276 640-649 Negative_regulation denotes deficient
T1275 607-615 Positive_regulation denotes enhanced
T1274 560-573 Localization denotes translocation
T1273 552-559 Entity denotes Nuclear
T1272 448-460 Binding denotes interactions
T1271 404-414 Gene_expression denotes expression
T1270 378-388 Regulation denotes regulation
T1269 329-336 Regulation denotes effects
T1268 300-308 Negative_regulation denotes abrogate
T1251 1154-1158 Protein denotes CCR5
T1250 1135-1153 Protein denotes chemokine receptor
T1249 1121-1127 Protein denotes IL-1Ra
T1248 944-950 Protein denotes IL-1Ra
T1247 719-727 Protein denotes icIL-1Ra
T1246 697-717 Protein denotes Intracellular IL-1Ra
T1245 633-639 Protein denotes IL-1Ra
T1244 584-587 Protein denotes p65
T1243 509-513 Protein denotes PU.1
T1242 392-398 Protein denotes IL-1Ra
T1241 290-296 Protein denotes IL-1Ra
T1240 180-186 Protein denotes IL-1Ra
T1239 148-150 Protein denotes KC
T1238 136-142 Protein denotes GM-CSF
T1237 130-134 Protein denotes IL-6
T1236 119-128 Protein denotes IL-1alpha
R758 T1242 T1271 themeOf IL-1Ra,expression
R759 T1245 T1276 themeOf IL-1Ra,deficient
R760 T1246 T1277 causeOf Intracellular IL-1Ra,inhibit
R761 T1247 T1246 equivalentTo icIL-1Ra,Intracellular IL-1Ra
R762 T1248 T1278 themeOf IL-1Ra,expression
R767 T1271 T1270 themeOf expression,regulation
R768 T1273 T1274 locationOf Nuclear,translocation
R769 T1274 T1275 themeOf translocation,enhanced
R770 T1276 T1275 causeOf deficient,enhanced

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T2938 633-639 Protein denotes IL-1Ra
T2937 584-587 Protein denotes p65
T2936 509-513 Protein denotes PU.1
T2935 392-398 Protein denotes IL-1Ra
T2934 290-296 Protein denotes IL-1Ra
T2933 180-186 Protein denotes IL-1Ra
T2932 148-150 Protein denotes KC
T2931 136-142 Protein denotes GM-CSF
T2930 130-134 Protein denotes IL-6
T2929 119-128 Protein denotes IL-1alpha
T2965 930-940 Gene_expression denotes expression
T2964 607-615 Positive_regulation denotes enhanced
T2963 560-573 Localization denotes translocation
T2962 640-649 Negative_regulation denotes deficient
T2961 404-414 Gene_expression denotes expression
T2960 378-388 Regulation denotes regulation
T2944 1154-1158 Protein denotes CCR5
T2943 1135-1153 Protein denotes chemokine receptor
T2942 1121-1127 Protein denotes IL-1Ra
T2941 944-950 Protein denotes IL-1Ra
T2940 719-727 Protein denotes icIL-1Ra
T2939 697-717 Protein denotes Intracellular IL-1Ra
R1919 T2935 T2961 themeOf IL-1Ra,expression
R1923 T2937 T2963 themeOf p65,translocation
R1929 T2938 T2962 themeOf IL-1Ra,deficient
R1930 T2941 T2965 themeOf IL-1Ra,expression
R1943 T2961 T2960 themeOf expression,regulation
R1944 T2963 T2964 themeOf translocation,enhanced

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T4227 930-940 Gene_expression denotes expression
T4226 640-649 Negative_regulation denotes deficient
T4225 607-615 Positive_regulation denotes enhanced
T4224 560-573 Localization denotes translocation
T4223 378-388 Regulation denotes regulation
T4222 404-414 Gene_expression denotes expression
T4206 1154-1158 Protein denotes CCR5
T4205 1135-1153 Protein denotes chemokine receptor
T4204 1121-1127 Protein denotes IL-1Ra
T4203 944-950 Protein denotes IL-1Ra
T4202 719-727 Protein denotes icIL-1Ra
T4201 697-717 Protein denotes Intracellular IL-1Ra
T4200 633-639 Protein denotes IL-1Ra
T4199 584-587 Protein denotes p65
T4198 509-513 Protein denotes PU.1
T4197 392-398 Protein denotes IL-1Ra
T4196 290-296 Protein denotes IL-1Ra
T4195 180-186 Protein denotes IL-1Ra
T4194 148-150 Protein denotes KC
T4193 136-142 Protein denotes GM-CSF
T4192 130-134 Protein denotes IL-6
T4191 119-128 Protein denotes IL-1alpha
R3010 T4200 T4226 themeOf IL-1Ra,deficient
R3011 T4203 T4227 themeOf IL-1Ra,expression
R3023 T4222 T4223 themeOf expression,regulation
R3025 T4224 T4225 themeOf translocation,enhanced
R3007 T4197 T4222 themeOf IL-1Ra,expression
R3008 T4199 T4224 themeOf p65,translocation

bionlp-st-ge-2016-coref

Id Subject Object Predicate Lexical cue
T1519 509-513 Antecedent denotes PU.1
T1518 480-501 Anaphor denotes transcription factors
R836 T1518 T1519 boundBy transcription factors,PU.1

2_test

Id Subject Object Predicate Lexical cue
22567084-9238507-91707032 152-154 9238507 denotes 34
22567084-9727052-91707033 547-549 9727052 denotes 35
22567084-16622035-91707034 692-694 16622035 denotes 36
22567084-12901852-91707035 829-831 12901852 denotes 37
22567084-9646173-91707036 900-902 9646173 denotes 38

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T2527 53-55 IN denotes in
T2526 45-52 JJ denotes present
T2525 41-44 VB denotes are
T2524 35-40 NN denotes sites
T2523 27-34 NN denotes binding
T2522 20-26 NN denotes factor
T2521 6-19 NN denotes transcription
T2520 0-5 NN denotes NF-κB
T2717 1154-1167 JJ denotes CCR5-mediated
T2716 1145-1153 NN denotes receptor
T2715 1135-1144 NN denotes chemokine
T2714 1131-1134 DT denotes the
T2713 1128-1130 IN denotes in
T2712 1121-1127 NN denotes IL-1Ra
T2711 1117-1120 CC denotes and
T2710 1111-1116 NN denotes NF-κB
T2709 1108-1110 IN denotes of
T2708 1102-1107 NN denotes roles
T2707 1098-1101 DT denotes the
T2706 1089-1097 VB denotes evaluate
T2705 1086-1088 TO denotes to
T2704 1082-1085 VB denotes was
T2703 1076-1081 NN denotes study
T2702 1071-1075 DT denotes this
T2701 1068-1070 IN denotes of
T2700 1064-1067 NN denotes aim
T2699 1060-1063 DT denotes the
T2698 1058-1059 -COMMA- denotes ,
T2697 1054-1058 RB denotes Thus
T2696 1047-1052 NN denotes versa
T2695 1042-1046 NN denotes vice
T2694 1039-1041 CC denotes or
T2693 1033-1038 NN denotes NF-κB
T2692 1025-1032 NN denotes factors
T2691 1011-1024 NN denotes transcription
T2690 1008-1010 IN denotes of
T2689 997-1007 NN denotes activation
T2688 987-996 JJ denotes autocrine
T2687 983-986 DT denotes the
T2686 980-982 IN denotes in
T2685 975-979 NN denotes role
T2684 965-974 JJ denotes important
T2683 962-964 DT denotes an
T2682 957-961 VB denotes play
T2681 951-956 MD denotes could
T2680 944-950 NN denotes IL-1Ra
T2679 941-943 IN denotes of
T2678 930-940 NN denotes expression
T2677 926-929 DT denotes the
T2676 921-925 IN denotes that
T2675 908-920 VB denotes hypothesized
T2674 905-907 PRP denotes we
T2673 903-904 -COMMA- denotes ,
T2672 902-903 -RRB- denotes ]
T2671 900-902 CD denotes 38
T2670 899-900 -LRB- denotes [
T2669 888-898 NN denotes activation
T2668 882-887 NN denotes NF-κB
T2667 879-881 IN denotes of
T2666 871-878 NN denotes inducer
T2665 868-870 DT denotes an
T2664 865-867 VB denotes be
T2663 862-864 TO denotes to
T2662 856-861 VB denotes shown
T2661 851-855 VB denotes been
T2660 847-850 VB denotes has
T2659 842-846 NN denotes IL-1
T2658 834-841 IN denotes Because
T2657 831-832 -RRB- denotes ]
T2656 829-831 CD denotes 37
T2655 828-829 -LRB- denotes [
T2654 818-827 NN denotes responses
T2653 805-817 JJ denotes inflammatory
T2652 802-804 IN denotes in
T2651 793-801 NN denotes pathways
T2650 780-792 NN denotes transduction
T2649 773-779 NN denotes signal
T2648 767-772 NN denotes NF-κB
T2647 758-766 VB denotes blocking
T2646 755-757 IN denotes by
T2645 750-754 NN denotes IL-1
T2644 742-749 VB denotes inhibit
T2643 739-741 TO denotes to
T2642 733-738 VB denotes found
T2641 729-732 VB denotes was
T2640 727-728 -RRB- denotes )
T2639 719-727 NN denotes icIL-1Ra
T2638 718-719 -LRB- denotes (
T2637 711-717 NN denotes IL-1Ra
T2636 697-710 JJ denotes Intracellular
T2635 694-695 -RRB- denotes ]
T2634 692-694 CD denotes 36
T2633 691-692 -LRB- denotes [
T2632 686-690 NN denotes mice
T2631 681-685 NN denotes type
T2630 676-680 JJ denotes wild
T2629 673-675 IN denotes in
T2628 668-672 DT denotes that
T2627 665-667 TO denotes to
T2626 656-664 VB denotes compared
T2625 654-655 -COMMA- denotes ,
T2624 650-654 NN denotes mice
T2623 633-649 JJ denotes IL-1Ra-deficient
T2622 630-632 IN denotes in
T2621 620-629 VB denotes prolonged
T2620 616-619 CC denotes and
T2619 607-615 VB denotes enhanced
T2618 593-606 RB denotes significantly
T2617 589-592 VB denotes was
T2616 587-588 -RRB- denotes )
T2615 584-587 NN denotes p65
T2614 583-584 -LRB- denotes (
T2613 577-582 NN denotes NF-κB
T2612 574-576 IN denotes of
T2611 560-573 NN denotes translocation
T2610 552-559 JJ denotes Nuclear
T2609 549-550 -RRB- denotes ]
T2608 547-549 CD denotes 35
T2607 546-547 -LRB- denotes [
T2606 541-545 NN denotes site
T2605 533-540 NN denotes binding
T2604 525-532 NN denotes protein
T2603 503-524 JJ denotes NF-κB/PU.1/GA-binding
T2602 501-502 -COLON- denotes ;
T2601 494-501 NN denotes factors
T2600 480-493 NN denotes transcription
T2599 470-479 JJ denotes different
T2598 464-469 CD denotes three
T2597 461-463 IN denotes of
T2596 448-460 NN denotes interactions
T2595 444-447 DT denotes the
T2594 434-443 VB denotes involving
T2593 428-433 NN denotes event
T2592 420-427 JJ denotes complex
T2591 418-419 DT denotes a
T2590 415-417 VB denotes is
T2589 404-414 NN denotes expression
T2588 399-403 NN denotes gene
T2587 392-398 NN denotes IL-1Ra
T2586 389-391 IN denotes of
T2585 378-388 NN denotes regulation
T2584 374-377 DT denotes the
T2583 369-373 IN denotes that
T2582 359-368 VB denotes suggested
T2581 355-358 FW denotes al.
T2580 352-354 FW denotes et
T2579 346-351 NNP denotes Smith
T2578 340-344 NN denotes IL-1
T2577 337-339 IN denotes of
T2576 329-336 NN denotes effects
T2575 313-328 JJ denotes proinflammatory
T2574 309-312 DT denotes the
T2573 300-308 VB denotes abrogate
T2572 297-299 TO denotes to
T2571 290-296 NN denotes IL-1Ra
T2570 287-289 IN denotes of
T2569 279-286 NN denotes ability
T2568 275-278 DT denotes the
T2567 262-274 VB denotes demonstrated
T2566 257-261 VB denotes have
T2565 249-256 NN denotes studies
T2564 241-248 JJ denotes Several
T2563 231-239 NN denotes response
T2562 218-230 JJ denotes inflammatory
T2561 214-217 DT denotes the
T2560 211-213 IN denotes of
T2559 201-210 NN denotes regulator
T2558 192-200 JJ denotes negative
T2557 190-191 DT denotes a
T2556 187-189 VB denotes is
T2555 180-186 NN denotes IL-1Ra
T2554 176-179 DT denotes the
T2553 174-175 -COMMA- denotes ,
T2552 170-174 NN denotes hand
T2551 164-169 JJ denotes other
T2550 160-163 DT denotes the
T2549 157-159 IN denotes On
T2548 154-155 -RRB- denotes ]
T2547 152-154 CD denotes 34
T2546 151-152 -LRB- denotes [
T2545 148-150 NNP denotes KC
T2544 144-147 CC denotes and
T2543 142-143 -COMMA- denotes ,
T2542 136-142 NN denotes GM-CSF
T2541 134-135 -COMMA- denotes ,
T2540 130-134 NN denotes IL-6
T2539 128-129 -COMMA- denotes ,
T2538 119-128 NN denotes IL-1alpha
T2537 116-118 IN denotes as
T2536 111-115 JJ denotes such
T2535 109-110 -COMMA- denotes ,
T2534 104-109 NN denotes genes
T2533 95-103 NN denotes cytokine
T2532 79-94 JJ denotes proinflammatory
T2531 76-78 IN denotes of
T2530 69-75 NN denotes region
T2529 60-68 NN denotes promoter
T2528 56-59 DT denotes the
T2721 1189-1200 NN denotes development
T2720 1183-1188 NN denotes tumor
T2719 1180-1182 IN denotes of
T2718 1168-1179 NN denotes suppression
R1548 T2524 T2520 arg1Of sites,NF-κB
R1549 T2524 T2521 arg1Of sites,transcription
R1550 T2524 T2522 arg1Of sites,factor
R1551 T2524 T2523 arg1Of sites,binding
R1552 T2524 T2525 arg1Of sites,are
R1553 T2524 T2526 arg1Of sites,present
R1555 T2526 T2525 arg2Of present,are
R1556 T2526 T2527 arg1Of present,in
R1559 T2530 T2527 arg2Of region,in
R1560 T2530 T2528 arg1Of region,the
R1561 T2530 T2529 arg1Of region,promoter
R1562 T2530 T2531 arg1Of region,of
R1564 T2534 T2531 arg2Of genes,of
R1565 T2534 T2532 arg1Of genes,proinflammatory
R1566 T2534 T2533 arg1Of genes,cytokine
R1567 T2534 T2535 arg1Of genes,","
R1568 T2534 T2537 arg1Of genes,as
R1570 T2537 T2536 arg1Of as,such
R1571 T2538 T2539 arg1Of IL-1alpha,","
R1573 T2539 T2541 arg1Of ",",","
R1574 T2540 T2539 arg2Of IL-6,","
R1576 T2541 T2544 arg1Of ",",and
R1577 T2542 T2541 arg2Of GM-CSF,","
R1578 T2544 T2537 arg2Of and,as
R1579 T2544 T2543 arg1Of and,","
R1580 T2545 T2544 arg2Of KC,and
R1581 T2545 T2546 arg1Of KC,[
R1583 T2547 T2546 arg2Of 34,[
R1584 T2548 T2546 arg3Of ],[
R1588 T2552 T2549 arg2Of hand,On
R1589 T2552 T2550 arg1Of hand,the
R1590 T2552 T2551 arg1Of hand,other
R1591 T2555 T2554 arg1Of IL-1Ra,the
R1592 T2555 T2556 arg1Of IL-1Ra,is
R1593 T2556 T2549 arg1Of is,On
R1594 T2556 T2553 arg1Of is,","
R1596 T2559 T2556 arg2Of regulator,is
R1597 T2559 T2557 arg1Of regulator,a
R1598 T2559 T2558 arg1Of regulator,negative
R1599 T2559 T2560 arg1Of regulator,of
R1600 T2563 T2560 arg2Of response,of
R1601 T2563 T2561 arg1Of response,the
R1604 T2563 T2562 arg1Of response,inflammatory
R1605 T2565 T2564 arg1Of studies,Several
R1606 T2565 T2566 arg1Of studies,have
R1607 T2565 T2567 arg1Of studies,demonstrated
R1608 T2567 T2566 arg2Of demonstrated,have
R1610 T2569 T2567 arg2Of ability,demonstrated
R1611 T2569 T2568 arg1Of ability,the
R1612 T2569 T2570 arg1Of ability,of
R1613 T2569 T2572 modOf ability,to
R1615 T2571 T2570 arg2Of IL-1Ra,of
R1617 T2573 T2572 arg1Of abrogate,to
R1620 T2576 T2573 arg2Of effects,abrogate
R1621 T2576 T2574 arg1Of effects,the
R1622 T2576 T2575 arg1Of effects,proinflammatory
R1623 T2576 T2577 arg1Of effects,of
R1625 T2578 T2577 arg2Of IL-1,of
R1626 T2579 T2581 arg1Of Smith,al.
R1627 T2579 T2582 arg1Of Smith,suggested
R1628 T2581 T2580 arg1Of al.,et
R1632 T2585 T2584 arg1Of regulation,the
R1633 T2585 T2586 arg1Of regulation,of
R1634 T2585 T2590 arg1Of regulation,is
R1635 T2589 T2586 arg2Of expression,of
R1636 T2589 T2587 arg1Of expression,IL-1Ra
R1637 T2589 T2588 arg1Of expression,gene
R1638 T2590 T2582 arg2Of is,suggested
R1639 T2590 T2583 arg1Of is,that
R1640 T2590 T2607 arg1Of is,[
R1643 T2593 T2590 arg2Of event,is
R1644 T2593 T2591 arg1Of event,a
R1645 T2593 T2592 arg1Of event,complex
R1646 T2593 T2594 arg1Of event,involving
R1647 T2593 T2602 arg1Of event,;
R1649 T2596 T2594 arg2Of interactions,involving
R1650 T2596 T2595 arg1Of interactions,the
R1651 T2596 T2597 arg1Of interactions,of
R1652 T2601 T2597 arg2Of factors,of
R1653 T2601 T2598 arg1Of factors,three
R1654 T2601 T2599 arg1Of factors,different
R1655 T2601 T2600 arg1Of factors,transcription
R1658 T2606 T2602 arg2Of site,;
R1659 T2606 T2603 arg1Of site,NF-κB/PU.1/GA-binding
R1660 T2606 T2604 arg1Of site,protein
R1661 T2606 T2605 arg1Of site,binding
R1662 T2608 T2607 arg2Of 35,[
R1663 T2609 T2607 arg3Of ],[
R1665 T2611 T2610 arg1Of translocation,Nuclear
R1666 T2611 T2612 arg1Of translocation,of
R1667 T2611 T2617 arg1Of translocation,was
R1668 T2611 T2619 arg2Of translocation,enhanced
R1669 T2611 T2621 arg2Of translocation,prolonged
R1670 T2613 T2612 arg2Of NF-κB,of
R1671 T2613 T2614 arg1Of NF-κB,(
R1674 T2615 T2614 arg2Of p65,(
R1676 T2616 T2614 arg3Of ),(
R1678 T2619 T2620 arg1Of enhanced,and
R1680 T2620 T2617 arg2Of and,was
R1681 T2620 T2618 arg1Of and,significantly
R1682 T2620 T2622 arg1Of and,in
R1683 T2620 T2625 arg1Of and,","
R1684 T2620 T2626 arg1Of and,compared
R1685 T2621 T2620 arg2Of prolonged,and
R1686 T2624 T2622 arg2Of mice,in
R1687 T2624 T2623 arg1Of mice,IL-1Ra-deficient
R1689 T2627 T2626 arg2Of to,compared
R1690 T2628 T2627 arg2Of that,to
R1691 T2628 T2629 arg1Of that,in
R1693 T2632 T2629 arg2Of mice,in
R1694 T2632 T2630 arg1Of mice,wild
R1695 T2632 T2631 arg1Of mice,type
R1696 T2632 T2633 arg1Of mice,[
R1697 T2634 T2633 arg2Of 36,[
R1698 T2635 T2633 arg3Of ],[
R1699 T2637 T2636 arg1Of IL-1Ra,Intracellular
R1700 T2637 T2638 arg1Of IL-1Ra,(
R1701 T2637 T2641 arg1Of IL-1Ra,was
R1702 T2637 T2642 arg2Of IL-1Ra,found
R1703 T2637 T2644 arg1Of IL-1Ra,inhibit
R1704 T2637 T2647 arg1Of IL-1Ra,blocking
R1706 T2639 T2638 arg2Of icIL-1Ra,(
R1708 T2640 T2638 arg3Of ),(
R1710 T2642 T2641 arg2Of found,was
R1713 T2644 T2642 arg3Of inhibit,found
R1714 T2644 T2643 arg1Of inhibit,to
R1715 T2644 T2646 arg1Of inhibit,by
R1716 T2645 T2644 arg2Of IL-1,inhibit
R1717 T2647 T2646 arg2Of blocking,by
R1719 T2651 T2647 arg2Of pathways,blocking
R1720 T2651 T2648 arg1Of pathways,NF-κB
R1721 T2651 T2649 arg1Of pathways,signal
R1722 T2651 T2650 arg1Of pathways,transduction
R1723 T2651 T2652 arg1Of pathways,in
R1725 T2654 T2652 arg2Of responses,in
R1726 T2654 T2653 arg1Of responses,inflammatory
R1727 T2654 T2655 arg1Of responses,[
R1729 T2656 T2655 arg2Of 37,[
R1730 T2657 T2655 arg3Of ],[
R1731 T2659 T2660 arg1Of IL-1,has
R1732 T2659 T2661 arg1Of IL-1,been
R1733 T2659 T2662 arg2Of IL-1,shown
R1734 T2659 T2664 arg1Of IL-1,be
R1736 T2662 T2658 arg2Of shown,Because
R1737 T2662 T2660 arg2Of shown,has
R1738 T2662 T2661 arg2Of shown,been
R1740 T2664 T2662 arg3Of be,shown
R1741 T2664 T2663 arg1Of be,to
R1743 T2666 T2664 arg2Of inducer,be
R1744 T2666 T2665 arg1Of inducer,an
R1745 T2666 T2667 arg1Of inducer,of
R1746 T2669 T2667 arg2Of activation,of
R1747 T2669 T2668 arg1Of activation,NF-κB
R1748 T2669 T2670 arg1Of activation,[
R1750 T2671 T2670 arg2Of 38,[
R1751 T2672 T2670 arg3Of ],[
R1752 T2674 T2675 arg1Of we,hypothesized
R1753 T2675 T2658 arg1Of hypothesized,Because
R1754 T2675 T2673 arg1Of hypothesized,","
R1756 T2678 T2677 arg1Of expression,the
R1757 T2678 T2679 arg1Of expression,of
R1758 T2678 T2681 arg1Of expression,could
R1759 T2678 T2682 arg1Of expression,play
R1760 T2680 T2679 arg2Of IL-1Ra,of
R1761 T2682 T2675 arg2Of play,hypothesized
R1762 T2682 T2676 arg1Of play,that
R1763 T2682 T2681 arg2Of play,could
R1764 T2682 T2686 arg1Of play,in
R1765 T2685 T2682 arg2Of role,play
R1766 T2685 T2683 arg1Of role,an
R1767 T2685 T2684 arg1Of role,important
R1770 T2689 T2686 arg2Of activation,in
R1771 T2689 T2687 arg1Of activation,the
R1772 T2689 T2688 arg1Of activation,autocrine
R1773 T2689 T2690 arg1Of activation,of
R1775 T2692 T2691 arg1Of factors,transcription
R1776 T2693 T2694 arg1Of NF-κB,or
R1777 T2694 T2690 arg2Of or,of
R1778 T2694 T2692 arg1Of or,factors
R1781 T2696 T2694 arg2Of versa,or
R1782 T2696 T2695 arg1Of versa,vice
R1785 T2700 T2699 arg1Of aim,the
R1786 T2700 T2701 arg1Of aim,of
R1787 T2700 T2704 arg1Of aim,was
R1788 T2703 T2701 arg2Of study,of
R1789 T2703 T2702 arg1Of study,this
R1790 T2704 T2697 arg1Of was,Thus
R1791 T2704 T2698 arg1Of was,","
R1793 T2706 T2704 arg2Of evaluate,was
R1794 T2706 T2705 arg1Of evaluate,to
R1795 T2708 T2706 arg2Of roles,evaluate
R1796 T2708 T2707 arg1Of roles,the
R1797 T2708 T2709 arg1Of roles,of
R1798 T2708 T2713 arg1Of roles,in
R1800 T2710 T2711 arg1Of NF-κB,and
R1807 T2711 T2709 arg2Of and,of
R1808 T2712 T2711 arg2Of IL-1Ra,and
R1809 T2718 T2713 arg2Of suppression,in
R1810 T2718 T2714 arg1Of suppression,the
R1811 T2718 T2715 arg1Of suppression,chemokine
R1812 T2718 T2716 arg1Of suppression,receptor
R1813 T2718 T2717 arg1Of suppression,CCR5-mediated
R1814 T2718 T2719 arg1Of suppression,of
R1815 T2721 T2719 arg2Of development,of
R1816 T2721 T2720 arg1Of development,tumor

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T1558 509-513 Protein denotes PU.1
T1557 392-398 Protein denotes IL-1Ra
T1556 290-296 Protein denotes IL-1Ra
T1555 180-186 Protein denotes IL-1Ra
T1554 148-150 Protein denotes KC
T1553 136-142 Protein denotes GM-CSF
T1552 130-134 Protein denotes IL-6
T1551 119-128 Protein denotes IL-1alpha
T1566 1154-1158 Protein denotes CCR5
T1565 1135-1153 Protein denotes chemokine receptor
T1564 1121-1127 Protein denotes IL-1Ra
T1563 944-950 Protein denotes IL-1Ra
T1562 719-727 Protein denotes icIL-1Ra
T1561 697-717 Protein denotes Intracellular IL-1Ra
T1560 633-639 Protein denotes IL-1Ra
T1559 584-587 Protein denotes p65

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T2757 584-587 http://www.uniprot.org/uniprot/P21579 denotes p65
T2756 584-587 http://www.uniprot.org/uniprot/Q04206 denotes p65
T2755 509-513 http://www.uniprot.org/uniprot/P17947 denotes PU.1
T2754 130-134 http://www.uniprot.org/uniprot/P05231 denotes IL-6
T2753 139-142 http://www.uniprot.org/uniprot/P04141 denotes CSF
T2747 1121-1127 http://www.uniprot.org/uniprot/P18510 denotes IL-1Ra
T2746 944-950 http://www.uniprot.org/uniprot/P18510 denotes IL-1Ra
T2745 711-717 http://www.uniprot.org/uniprot/P18510 denotes IL-1Ra
T2744 633-639 http://www.uniprot.org/uniprot/P18510 denotes IL-1Ra
T2743 392-398 http://www.uniprot.org/uniprot/P18510 denotes IL-1Ra
T2742 290-296 http://www.uniprot.org/uniprot/P18510 denotes IL-1Ra
T2741 180-186 http://www.uniprot.org/uniprot/P18510 denotes IL-1Ra
T2731 1154-1158 http://www.uniprot.org/uniprot/P51681 denotes CCR5

GO-BP

Id Subject Object Predicate Lexical cue
T1636 997-1032 http://purl.obolibrary.org/obo/GO_1901485 denotes activation of transcription factors
T1635 997-1032 http://purl.obolibrary.org/obo/GO_0032793 denotes activation of transcription factors
T1634 997-1032 http://purl.obolibrary.org/obo/GO_0051091 denotes activation of transcription factors
T1633 780-792 http://purl.obolibrary.org/obo/GO_0009293 denotes transduction
T1632 773-801 http://purl.obolibrary.org/obo/GO_0035556 denotes signal transduction pathways
T1631 773-801 http://purl.obolibrary.org/obo/GO_0036499 denotes signal transduction pathways
T1630 773-801 http://purl.obolibrary.org/obo/GO_0036500 denotes signal transduction pathways
T1629 773-801 http://purl.obolibrary.org/obo/GO_0036498 denotes signal transduction pathways
T1593 1189-1200 http://purl.obolibrary.org/obo/GO_0032502 denotes development
T1585 805-827 http://purl.obolibrary.org/obo/GO_0006954 denotes inflammatory responses
T1584 218-239 http://purl.obolibrary.org/obo/GO_0006954 denotes inflammatory response
T1628 773-792 http://purl.obolibrary.org/obo/GO_0007165 denotes signal transduction
T1627 773-779 http://purl.obolibrary.org/obo/GO_0023052 denotes signal
T1626 767-792 http://purl.obolibrary.org/obo/GO_0038061 denotes NF-κB signal transduction
T1625 514-516 http://purl.obolibrary.org/obo/GO_0033968 denotes GA
T1624 1011-1024 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T1623 480-493 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T1622 6-19 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T1620 378-388 http://purl.obolibrary.org/obo/GO_0065007 denotes regulation
T1608 399-414 http://purl.obolibrary.org/obo/GO_0010467 denotes gene expression
T1606 997-1038 http://purl.obolibrary.org/obo/GO_0051092 denotes activation of transcription factors NF-κB
T1605 882-898 http://purl.obolibrary.org/obo/GO_0051092 denotes NF-κB activation

GO-MF

Id Subject Object Predicate Lexical cue
T1673 997-1032 http://purl.obolibrary.org/obo/GO_0033613 denotes activation of transcription factors
T1672 517-532 http://purl.obolibrary.org/obo/GO_0005515 denotes binding protein
T1671 514-516 http://purl.obolibrary.org/obo/GO_0033968 denotes GA
T1670 130-134 http://purl.obolibrary.org/obo/GO_0005138 denotes IL-6
T1663 842-846 http://purl.obolibrary.org/obo/GO_0005149 denotes IL-1
T1662 750-754 http://purl.obolibrary.org/obo/GO_0005149 denotes IL-1
T1661 340-344 http://purl.obolibrary.org/obo/GO_0005149 denotes IL-1
T1653 1135-1158 http://purl.obolibrary.org/obo/GO_0031730 denotes chemokine receptor CCR5
T1650 533-540 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T1649 517-524 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T1648 27-34 http://purl.obolibrary.org/obo/GO_0005488 denotes binding

GO-CC

Id Subject Object Predicate Lexical cue
T1646 697-710 http://purl.obolibrary.org/obo/GO_0005622 denotes Intracellular

sentences

Id Subject Object Predicate Lexical cue
T1440 1054-1201 Sentence denotes Thus, the aim of this study was to evaluate the roles of NF-κB and IL-1Ra in the chemokine receptor CCR5-mediated suppression of tumor development.
T1439 834-1053 Sentence denotes Because IL-1 has been shown to be an inducer of NF-κB activation [38], we hypothesized that the expression of IL-1Ra could play an important role in the autocrine activation of transcription factors NF-κB or vice versa.
T1438 697-833 Sentence denotes Intracellular IL-1Ra (icIL-1Ra) was found to inhibit IL-1 by blocking NF-κB signal transduction pathways in inflammatory responses [37].
T1437 552-696 Sentence denotes Nuclear translocation of NF-κB (p65) was significantly enhanced and prolonged in IL-1Ra-deficient mice, compared to that in wild type mice [36].
T1436 346-551 Sentence denotes Smith et al. suggested that the regulation of IL-1Ra gene expression is a complex event involving the interactions of three different transcription factors; NF-κB/PU.1/GA-binding protein binding site [35].
T1435 241-345 Sentence denotes Several studies have demonstrated the ability of IL-1Ra to abrogate the proinflammatory effects of IL-1.
T1434 157-240 Sentence denotes On the other hand, the IL-1Ra is a negative regulator of the inflammatory response.
T1433 0-156 Sentence denotes NF-κB transcription factor binding sites are present in the promoter region of proinflammatory cytokine genes, such as IL-1alpha, IL-6, GM-CSF, and KC [34].
T42 0-156 Sentence denotes NF-κB transcription factor binding sites are present in the promoter region of proinflammatory cytokine genes, such as IL-1alpha, IL-6, GM-CSF, and KC [34].
T43 157-240 Sentence denotes On the other hand, the IL-1Ra is a negative regulator of the inflammatory response.
T44 241-345 Sentence denotes Several studies have demonstrated the ability of IL-1Ra to abrogate the proinflammatory effects of IL-1.
T45 346-551 Sentence denotes Smith et al. suggested that the regulation of IL-1Ra gene expression is a complex event involving the interactions of three different transcription factors; NF-κB/PU.1/GA-binding protein binding site [35].
T46 552-696 Sentence denotes Nuclear translocation of NF-κB (p65) was significantly enhanced and prolonged in IL-1Ra-deficient mice, compared to that in wild type mice [36].
T47 697-833 Sentence denotes Intracellular IL-1Ra (icIL-1Ra) was found to inhibit IL-1 by blocking NF-κB signal transduction pathways in inflammatory responses [37].
T48 834-1053 Sentence denotes Because IL-1 has been shown to be an inducer of NF-κB activation [38], we hypothesized that the expression of IL-1Ra could play an important role in the autocrine activation of transcription factors NF-κB or vice versa.
T49 1054-1201 Sentence denotes Thus, the aim of this study was to evaluate the roles of NF-κB and IL-1Ra in the chemokine receptor CCR5-mediated suppression of tumor development.

simple1

Id Subject Object Predicate Lexical cue
T1720 1154-1158 Protein denotes CCR5
T1719 1135-1153 Protein denotes chemokine receptor
T1718 1121-1127 Protein denotes IL-1Ra
T1717 944-950 Protein denotes IL-1Ra
T1716 719-727 Protein denotes icIL-1Ra
T1715 697-717 Protein denotes Intracellular IL-1Ra
T1714 633-639 Protein denotes IL-1Ra
T1713 584-587 Protein denotes p65
T1712 509-513 Protein denotes PU.1
T1711 392-398 Protein denotes IL-1Ra
T1710 290-296 Protein denotes IL-1Ra
T1709 180-186 Protein denotes IL-1Ra
T1708 148-150 Protein denotes KC
T1707 136-142 Protein denotes GM-CSF
T1706 130-134 Protein denotes IL-6
T1705 119-128 Protein denotes IL-1alpha

DLUT931

Id Subject Object Predicate Lexical cue
T2833 1159-1167 Positive_regulation denotes mediated
T2832 975-979 Regulation denotes role
T2831 930-940 Gene_expression denotes expression
T2830 742-749 Negative_regulation denotes inhibit
T2829 640-649 Negative_regulation denotes deficient
T2828 607-615 Positive_regulation denotes enhanced
T2827 560-573 Localization denotes translocation
T2826 378-388 Regulation denotes regulation
T2825 533-540 Binding denotes binding
T2824 514-524 Binding denotes GA-binding
T2823 404-414 Gene_expression denotes expression
T2822 300-308 Negative_regulation denotes abrogate
T2804 1154-1158 Protein denotes CCR5
T2803 1135-1153 Protein denotes chemokine receptor
T2802 1121-1127 Protein denotes IL-1Ra
T2801 944-950 Protein denotes IL-1Ra
T2800 719-727 Protein denotes icIL-1Ra
T2799 697-717 Protein denotes Intracellular IL-1Ra
T2798 633-639 Protein denotes IL-1Ra
T2797 584-587 Protein denotes p65
T2796 509-513 Protein denotes PU.1
T2795 392-398 Protein denotes IL-1Ra
T2794 290-296 Protein denotes IL-1Ra
T2793 180-186 Protein denotes IL-1Ra
T2792 148-150 Protein denotes KC
T2791 136-142 Protein denotes GM-CSF
T2790 130-134 Protein denotes IL-6
T2789 119-128 Protein denotes IL-1alpha
R1806 T2794 T2822 themeOf IL-1Ra,abrogate
R1827 T2795 T2823 themeOf IL-1Ra,expression
R1828 T2796 T2824 themeOf PU.1,GA-binding
R1830 T2796 T2825 themeOf PU.1,binding
R1831 T2797 T2827 themeOf p65,translocation
R1832 T2798 T2829 themeOf IL-1Ra,deficient
R1836 T2799 T2830 themeOf Intracellular IL-1Ra,inhibit
R1841 T2801 T2831 themeOf IL-1Ra,expression
R1849 T2803 T2833 themeOf chemokine receptor,mediated
R1850 T2804 T2833 causeOf CCR5,mediated
R1867 T2823 T2826 themeOf expression,regulation
R1870 T2827 T2828 themeOf translocation,enhanced
R1872 T2831 T2832 themeOf expression,role

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T4359 879-903 Positive_regulation denotes of NF-κB activation [38]
T4358 758-772 Negative_regulation denotes blocking NF-κB
T4356 552-639 Positive_regulation denotes Nuclear translocation of NF-κB (p65) was significantly enhanced and prolonged in IL-1Ra
T4355 389-414 Gene_expression denotes of IL-1Ra gene expression
T4352 374-414 Regulation denotes the regulation of IL-1Ra gene expression
T4349 552-639 Regulation denotes Nuclear translocation of NF-κB (p65) was significantly enhanced and prolonged in IL-1Ra
T4348 926-950 Gene_expression denotes the expression of IL-1Ra
T4341 742-754 Negative_regulation denotes inhibit IL-1
T4329 719-727 Protein denotes icIL-1Ra
T4326 287-296 Protein denotes of IL-1Ra
T4325 503-550 Entity denotes NF-κB/PU.1/GA-binding protein binding site [35]
T4321 461-501 Protein denotes of three different transcription factors
T4317 119-128 Protein denotes IL-1alpha
T4315 574-588 Protein denotes of NF-κB (p65)
T4314 56-110 Entity denotes the promoter region of proinflammatory cytokine genes,
T4310 1135-1167 Protein denotes chemokine receptor CCR5-mediated
T4308 633-639 Protein denotes IL-1Ra
T4305 584-587 Protein denotes p65
T4304 76-110 Protein denotes of proinflammatory cytokine genes,
T4296 882-887 Protein denotes NF-κB
T4289 392-398 Protein denotes IL-1Ra
T4286 842-846 Protein denotes IL-1
T4277 1135-1144 Protein denotes chemokine
T4276 176-186 Protein denotes the IL-1Ra
T4273 148-150 Protein denotes KC
T4271 136-142 Protein denotes GM-CSF
T4269 767-772 Protein denotes NF-κB
T4267 0-40 Entity denotes NF-κB transcription factor binding sites
T4266 650-654 Protein denotes mice
T4262 1121-1127 Protein denotes IL-1Ra
T4258 340-344 Protein denotes IL-1
T4257 1111-1116 Protein denotes NF-κB
T4249 941-950 Protein denotes of IL-1Ra
T4247 0-5 Protein denotes NF-κB
T4246 130-134 Protein denotes IL-6
T4241 95-103 Protein denotes cytokine
T4240 1033-1038 Protein denotes NF-κB
T4237 697-728 Protein denotes Intracellular IL-1Ra (icIL-1Ra)
T4236 1135-1167 Protein denotes chemokine receptor CCR5-mediated
T4231 750-754 Protein denotes IL-1
T4229 676-695 Protein denotes wild type mice [36]
R3033 T4231 T4341 themeOf IL-1,inhibit IL-1
R3045 T4249 T4348 themeOf of IL-1Ra,the expression of IL-1Ra
R3052 T4269 T4358 themeOf NF-κB,blocking NF-κB
R3055 T4289 T4355 themeOf IL-1Ra,of IL-1Ra gene expression
R3056 T4296 T4359 themeOf NF-κB,of NF-κB activation [38]
R3068 T4355 T4352 themeOf of IL-1Ra gene expression,the regulation of IL-1Ra gene expression

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T3958 95-103 NN denotes cytokine
T3957 79-94 JJ denotes proinflammatory
T3956 76-78 IN denotes of
T3955 69-75 NN denotes region
T3954 60-68 NN denotes promoter
T3953 56-59 DT denotes the
T3952 53-55 IN denotes in
T3951 45-52 JJ denotes present
T3950 41-44 VBP denotes are
T4159 1200-1201 . denotes .
T4158 1189-1200 NN denotes development
T4157 1183-1188 NN denotes tumor
T4156 1180-1182 IN denotes of
T4155 1168-1179 NN denotes suppression
T4154 1154-1167 JJ denotes CCR5-mediated
T4153 1145-1153 NN denotes receptor
T4152 1135-1144 NN denotes chemokine
T4151 1131-1134 DT denotes the
T4150 1128-1130 IN denotes in
T4149 1121-1127 NN denotes IL-1Ra
T4148 1117-1120 CC denotes and
T4147 1111-1116 NN denotes NF-κB
T4146 1108-1110 IN denotes of
T4145 1102-1107 NNS denotes roles
T4144 1098-1101 DT denotes the
T4143 1089-1097 VB denotes evaluate
T4142 1086-1088 TO denotes to
T4141 1082-1085 VBD denotes was
T4140 1076-1081 NN denotes study
T4139 1071-1075 DT denotes this
T4138 1068-1070 IN denotes of
T4137 1064-1067 NN denotes aim
T4136 1060-1063 DT denotes the
T4135 1058-1059 , denotes ,
T4134 1054-1058 RB denotes Thus
T4133 1052-1053 . denotes .
T4132 1047-1052 RB denotes versa
T4131 1042-1046 NN denotes vice
T4130 1039-1041 CC denotes or
T4129 1033-1038 VBP denotes NF-κB
T4128 1025-1032 NNS denotes factors
T4127 1011-1024 NN denotes transcription
T4126 1008-1010 IN denotes of
T4125 997-1007 NN denotes activation
T4124 987-996 NN denotes autocrine
T4123 983-986 DT denotes the
T4122 980-982 IN denotes in
T4121 975-979 NN denotes role
T4120 965-974 JJ denotes important
T4119 962-964 DT denotes an
T4118 957-961 VB denotes play
T4117 951-956 MD denotes could
T4116 944-950 NN denotes IL-1Ra
T4115 941-943 IN denotes of
T4114 930-940 NN denotes expression
T4113 926-929 DT denotes the
T4112 921-925 IN denotes that
T4111 908-920 VBD denotes hypothesized
T4110 905-907 PRP denotes we
T4109 903-904 , denotes ,
T4108 902-903 NNP denotes ]
T4107 900-902 CD denotes 38
T4106 899-900 NNP denotes [
T4105 888-898 NN denotes activation
T4104 882-887 JJ denotes NF-κB
T4103 879-881 IN denotes of
T4102 871-878 NN denotes inducer
T4101 868-870 DT denotes an
T4100 865-867 VB denotes be
T4099 862-864 TO denotes to
T4098 856-861 VBN denotes shown
T4097 851-855 VBN denotes been
T4096 847-850 VBZ denotes has
T4095 842-846 NN denotes IL-1
T4094 834-841 IN denotes Because
T4093 832-833 . denotes .
T4092 831-832 NNP denotes ]
T4091 829-831 CD denotes 37
T4090 828-829 NNP denotes [
T4089 818-827 NNS denotes responses
T4088 805-817 JJ denotes inflammatory
T4087 802-804 IN denotes in
T4086 793-801 NNS denotes pathways
T4085 780-792 NN denotes transduction
T4084 773-779 NN denotes signal
T4083 767-772 JJ denotes NF-κB
T4082 758-766 VBG denotes blocking
T4081 755-757 IN denotes by
T4080 750-754 NN denotes IL-1
T4079 742-749 VB denotes inhibit
T4078 739-741 TO denotes to
T4077 733-738 VBN denotes found
T4076 729-732 VBD denotes was
T4075 727-728 -RRB- denotes )
T4074 719-727 NN denotes icIL-1Ra
T4073 718-719 -LRB- denotes (
T4072 711-717 NN denotes IL-1Ra
T4071 697-710 JJ denotes Intracellular
T4070 695-696 . denotes .
T4069 694-695 NNP denotes ]
T4068 692-694 CD denotes 36
T4067 691-692 NNP denotes [
T4066 686-690 NNS denotes mice
T4065 681-685 NN denotes type
T4064 676-680 JJ denotes wild
T4063 673-675 IN denotes in
T4062 668-672 DT denotes that
T4061 665-667 TO denotes to
T4060 656-664 VBN denotes compared
T4059 654-655 , denotes ,
T4058 650-654 NNS denotes mice
T4057 633-649 JJ denotes IL-1Ra-deficient
T4056 630-632 IN denotes in
T4055 620-629 VBN denotes prolonged
T4054 616-619 CC denotes and
T4053 607-615 VBN denotes enhanced
T4052 593-606 RB denotes significantly
T4051 589-592 VBD denotes was
T4050 587-588 -RRB- denotes )
T4049 584-587 NNS denotes p65
T4048 583-584 -LRB- denotes (
T4047 577-582 NNP denotes NF-κB
T4046 574-576 IN denotes of
T4045 560-573 NN denotes translocation
T4044 552-559 NNP denotes Nuclear
T4043 550-551 . denotes .
T4042 549-550 NNP denotes ]
T4041 547-549 CD denotes 35
T4040 546-547 NNP denotes [
T4039 541-545 NN denotes site
T4038 533-540 JJ denotes binding
T4037 525-532 NN denotes protein
T4036 514-524 JJ denotes GA-binding
T4035 513-514 CD denotes /
T4034 511-513 CD denotes .1
T4033 509-511 NNP denotes PU
T4032 508-509 NNP denotes /
T4031 503-508 NNP denotes NF-κB
T4030 501-502 : denotes ;
T4029 494-501 NNS denotes factors
T4028 480-493 NN denotes transcription
T4027 470-479 JJ denotes different
T4026 464-469 CD denotes three
T4025 461-463 IN denotes of
T4024 448-460 NNS denotes interactions
T4023 444-447 DT denotes the
T4022 434-443 VBG denotes involving
T4021 428-433 NN denotes event
T4020 420-427 JJ denotes complex
T4019 418-419 DT denotes a
T4018 415-417 VBZ denotes is
T4017 404-414 NN denotes expression
T4016 399-403 NN denotes gene
T4015 392-398 NN denotes IL-1Ra
T4014 389-391 IN denotes of
T4013 378-388 NN denotes regulation
T4012 374-377 DT denotes the
T4011 369-373 IN denotes that
T4010 359-368 VBD denotes suggested
T4009 355-358 FW denotes al.
T4008 352-354 FW denotes et
T4007 346-351 NNP denotes Smith
T4006 344-345 . denotes .
T3949 35-40 NNS denotes sites
T3948 27-34 JJ denotes binding
T3947 20-26 NN denotes factor
T3946 6-19 NN denotes transcription
T3945 0-5 JJ denotes NF-κB
T3991 241-248 JJ denotes Several
T3990 239-240 . denotes .
T3989 231-239 NN denotes response
T3988 218-230 JJ denotes inflammatory
T3987 214-217 DT denotes the
T3986 211-213 IN denotes of
T3985 201-210 NN denotes regulator
T3984 192-200 JJ denotes negative
T3983 190-191 DT denotes a
T3982 187-189 VBZ denotes is
T3981 180-186 NN denotes IL-1Ra
T3980 176-179 DT denotes the
T3979 174-175 , denotes ,
T3978 170-174 NN denotes hand
T3977 164-169 JJ denotes other
T3976 160-163 DT denotes the
T3975 157-159 IN denotes On
T3974 155-156 . denotes .
T3973 154-155 NNP denotes ]
T3972 152-154 CD denotes 34
T3971 151-152 NNP denotes [
T3970 148-150 NNP denotes KC
T3969 144-147 CC denotes and
T3968 142-143 , denotes ,
T3967 136-142 NNP denotes GM-CSF
T3966 134-135 , denotes ,
T3965 130-134 NNP denotes IL-6
T3964 128-129 , denotes ,
T3963 119-128 NN denotes IL-1alpha
T3962 116-118 IN denotes as
T3961 111-115 JJ denotes such
T3960 109-110 , denotes ,
T3959 104-109 NNS denotes genes
T4005 340-344 NN denotes IL-1
T4004 337-339 IN denotes of
T4003 329-336 NNS denotes effects
T4002 313-328 JJ denotes proinflammatory
T4001 309-312 DT denotes the
T4000 300-308 VB denotes abrogate
T3999 297-299 TO denotes to
T3998 290-296 NN denotes IL-1Ra
T3997 287-289 IN denotes of
T3996 279-286 NN denotes ability
T3995 275-278 DT denotes the
T3994 262-274 VBN denotes demonstrated
T3993 257-261 VBP denotes have
T3992 249-256 NNS denotes studies
R2779 T3959 T3956 pobj genes,of
R2784 T3960 T3959 punct ",",genes
R2788 T3961 T3962 amod such,as
R2792 T3962 T3959 prep as,genes
R2796 T3963 T3962 pobj IL-1alpha,as
R2800 T3964 T3963 punct ",",IL-1alpha
R2802 T3945 T3947 amod NF-κB,factor
R2803 T3946 T3947 compound transcription,factor
R2804 T3965 T3963 conj IL-6,IL-1alpha
R2805 T3947 T3947 ROOT factor,factor
R2806 T3948 T3949 amod binding,sites
R2807 T3949 T3950 nsubj sites,are
R2808 T3950 T3947 acl are,factor
R2809 T3951 T3950 acomp present,are
R2810 T3966 T3965 punct ",",IL-6
R2811 T3967 T3965 conj GM-CSF,IL-6
R2812 T3952 T3951 prep in,present
R2813 T3953 T3955 det the,region
R2814 T3954 T3955 compound promoter,region
R2815 T3968 T3967 punct ",",GM-CSF
R2816 T3955 T3952 pobj region,in
R2817 T3956 T3955 prep of,region
R2818 T3957 T3959 amod proinflammatory,genes
R2819 T3969 T3967 cc and,GM-CSF
R2820 T3958 T3959 compound cytokine,genes
R2821 T3970 T3971 compound KC,[
R2822 T3971 T3967 conj [,GM-CSF
R2823 T3972 T3973 nummod 34,]
R2824 T3973 T3971 appos ],[
R2825 T3974 T3947 punct .,factor
R2826 T4006 T3994 punct .,demonstrated
R2827 T4007 T4009 compound Smith,al.
R2828 T3975 T3982 prep On,is
R2829 T4008 T4009 compound et,al.
R2830 T4009 T4010 nsubj al.,suggested
R2831 T4010 T4010 ROOT suggested,suggested
R2832 T3976 T3978 det the,hand
R2833 T4011 T4018 mark that,is
R2834 T4012 T4013 det the,regulation
R2835 T3977 T3978 amod other,hand
R2836 T4013 T4018 nsubj regulation,is
R2837 T4014 T4013 prep of,regulation
R2838 T4015 T4017 amod IL-1Ra,expression
R2839 T3978 T3975 pobj hand,On
R2840 T4016 T4017 compound gene,expression
R2841 T4017 T4014 pobj expression,of
R2842 T4018 T4010 ccomp is,suggested
R2843 T3979 T3982 punct ",",is
R2844 T4019 T4021 det a,event
R2845 T4020 T4021 amod complex,event
R2846 T4021 T4018 attr event,is
R2847 T3980 T3981 det the,IL-1Ra
R2848 T4022 T4021 acl involving,event
R2849 T4023 T4024 det the,interactions
R2850 T4024 T4022 dobj interactions,involving
R2851 T3981 T3982 nsubj IL-1Ra,is
R2852 T4025 T4024 prep of,interactions
R2853 T4026 T4029 nummod three,factors
R2854 T3982 T3982 ROOT is,is
R2855 T4027 T4029 amod different,factors
R2856 T4028 T4029 compound transcription,factors
R2857 T4029 T4025 pobj factors,of
R2858 T4030 T4024 punct ;,interactions
R2859 T3983 T3985 det a,regulator
R2860 T4031 T4033 compound NF-κB,PU
R2861 T3984 T3985 amod negative,regulator
R2862 T4032 T4033 compound /,PU
R2863 T4033 T4035 neg PU,/
R2864 T4034 T4035 compound .1,/
R2865 T3985 T3982 attr regulator,is
R2866 T4035 T4021 appos /,event
R2867 T4036 T4039 amod GA-binding,site
R2868 T4037 T4039 nmod protein,site
R2869 T3986 T3985 prep of,regulator
R2870 T4038 T4039 amod binding,site
R2871 T4039 T4021 appos site,event
R2872 T4040 T4042 nmod [,]
R2873 T3987 T3989 det the,response
R2874 T4041 T4042 nummod 35,]
R2875 T3988 T3989 amod inflammatory,response
R2876 T3989 T3986 pobj response,of
R2877 T4042 T4039 appos ],site
R2878 T4043 T4010 punct .,suggested
R2879 T3990 T3982 punct .,is
R2880 T4044 T4045 compound Nuclear,translocation
R2881 T4045 T4053 nsubjpass translocation,enhanced
R2882 T4046 T4045 prep of,translocation
R2883 T3991 T3992 amod Several,studies
R2884 T4047 T4046 pobj NF-κB,of
R2885 T4048 T4049 punct (,p65
R2886 T3992 T3994 nsubj studies,demonstrated
R2887 T4049 T4047 appos p65,NF-κB
R2888 T4050 T4049 punct ),p65
R2889 T4051 T4053 auxpass was,enhanced
R2890 T3993 T3994 aux have,demonstrated
R2891 T4052 T4053 advmod significantly,enhanced
R2892 T4053 T4053 ROOT enhanced,enhanced
R2893 T4054 T4053 cc and,enhanced
R2894 T3994 T3994 ROOT demonstrated,demonstrated
R2895 T4055 T4053 conj prolonged,enhanced
R2896 T4056 T4055 prep in,prolonged
R2897 T4057 T4058 amod IL-1Ra-deficient,mice
R2898 T4058 T4056 pobj mice,in
R2899 T3995 T3996 det the,ability
R2900 T4059 T4055 punct ",",prolonged
R2901 T4060 T4053 prep compared,enhanced
R2902 T3996 T3994 dobj ability,demonstrated
R2903 T4061 T4060 prep to,compared
R2904 T3997 T3996 prep of,ability
R2905 T4062 T4061 pobj that,to
R2906 T3998 T3997 pobj IL-1Ra,of
R2907 T4063 T4062 prep in,that
R2908 T4064 T4066 amod wild,mice
R2909 T4065 T4066 compound type,mice
R2910 T4066 T4063 pobj mice,in
R2911 T4067 T4069 nmod [,]
R2912 T3999 T4000 aux to,abrogate
R2913 T4068 T4069 nummod 36,]
R2914 T4069 T4066 appos ],mice
R2915 T4070 T4053 punct .,enhanced
R2916 T4000 T3996 acl abrogate,ability
R2917 T4071 T4072 amod Intracellular,IL-1Ra
R2918 T4072 T4077 nsubjpass IL-1Ra,found
R2919 T4073 T4074 punct (,icIL-1Ra
R2920 T4074 T4072 appos icIL-1Ra,IL-1Ra
R2921 T4001 T4003 det the,effects
R2922 T4075 T4074 punct ),icIL-1Ra
R2923 T4076 T4077 auxpass was,found
R2924 T4077 T4077 ROOT found,found
R2925 T4002 T4003 amod proinflammatory,effects
R2926 T4078 T4079 aux to,inhibit
R2927 T4079 T4077 advcl inhibit,found
R2928 T4080 T4079 dobj IL-1,inhibit
R2929 T4003 T4000 dobj effects,abrogate
R2930 T4081 T4079 prep by,inhibit
R2931 T4082 T4081 pcomp blocking,by
R2932 T4083 T4086 amod NF-κB,pathways
R2933 T4004 T4003 prep of,effects
R2934 T4084 T4086 nmod signal,pathways
R2935 T4085 T4086 compound transduction,pathways
R2936 T4086 T4082 dobj pathways,blocking
R2937 T4005 T4004 pobj IL-1,of
R2938 T4103 T4102 prep of,inducer
R2939 T4087 T4086 prep in,pathways
R2940 T4088 T4089 amod inflammatory,responses
R2941 T4089 T4087 pobj responses,in
R2942 T4090 T4092 nmod [,]
R2943 T4104 T4105 amod NF-κB,activation
R2944 T4091 T4092 nummod 37,]
R2945 T4092 T4086 conj ],pathways
R2946 T4093 T4077 punct .,found
R2947 T4105 T4103 pobj activation,of
R2948 T4094 T4098 mark Because,shown
R2949 T4095 T4098 nsubjpass IL-1,shown
R2950 T4096 T4098 aux has,shown
R2951 T4097 T4098 auxpass been,shown
R2952 T4106 T4108 nmod [,]
R2953 T4098 T4111 advcl shown,hypothesized
R2954 T4099 T4100 aux to,be
R2955 T4100 T4098 xcomp be,shown
R2956 T4107 T4108 nummod 38,]
R2957 T4101 T4102 det an,inducer
R2958 T4102 T4100 attr inducer,be
R2959 T4108 T4102 appos ],inducer
R2960 T4109 T4111 punct ",",hypothesized
R2961 T4110 T4111 nsubj we,hypothesized
R2962 T4111 T4111 ROOT hypothesized,hypothesized
R2963 T4112 T4118 mark that,play
R2964 T4113 T4114 det the,expression
R2965 T4114 T4118 nsubj expression,play
R2966 T4115 T4114 prep of,expression
R2969 T4116 T4115 pobj IL-1Ra,of
R2973 T4117 T4118 aux could,play
R2976 T4118 T4111 ccomp play,hypothesized
R2977 T4119 T4121 det an,role
R2978 T4120 T4121 amod important,role
R2979 T4121 T4118 dobj role,play
R2980 T4122 T4118 prep in,play
R2981 T4123 T4125 det the,activation
R2984 T4124 T4125 compound autocrine,activation
R2985 T4125 T4122 pobj activation,in
R2997 T4126 T4125 prep of,activation
R3001 T4127 T4128 compound transcription,factors
R3002 T4128 T4126 pobj factors,of
R3003 T4129 T4118 conj NF-κB,play
R3004 T4130 T4129 cc or,NF-κB
R3005 T4131 T4132 advmod vice,versa
R3006 T4132 T4129 conj versa,NF-κB
R3009 T4133 T4111 punct .,hypothesized
R3012 T4134 T4141 advmod Thus,was
R3013 T4135 T4141 punct ",",was
R3014 T4136 T4137 det the,aim
R3015 T4137 T4141 nsubj aim,was
R3017 T4138 T4137 prep of,aim
R3021 T4139 T4140 det this,study
R3024 T4140 T4138 pobj study,of
R3026 T4141 T4141 ROOT was,was
R3027 T4142 T4143 aux to,evaluate
R3028 T4143 T4141 xcomp evaluate,was
R3029 T4144 T4145 det the,roles
R3030 T4145 T4143 dobj roles,evaluate
R3031 T4146 T4145 prep of,roles
R3032 T4147 T4146 pobj NF-κB,of
R3034 T4148 T4147 cc and,NF-κB
R3035 T4149 T4147 conj IL-1Ra,NF-κB
R3037 T4150 T4145 prep in,roles
R3039 T4151 T4155 det the,suppression
R3040 T4152 T4155 nmod chemokine,suppression
R3042 T4153 T4155 nmod receptor,suppression
R3043 T4154 T4155 amod CCR5-mediated,suppression
R3046 T4155 T4150 pobj suppression,in
R3047 T4156 T4155 prep of,suppression
R3048 T4157 T4158 compound tumor,development
R3049 T4158 T4156 pobj development,of
R3050 T4159 T4141 punct .,was

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T3064 1121-1127 Protein denotes IL-1Ra
T3063 1111-1116 Protein denotes NF-κB
T3062 871-878 Positive_regulation denotes inducer
T3061 997-1007 Positive_regulation denotes activation
T3060 930-940 Gene_expression denotes expression
T3059 888-898 Positive_regulation denotes activation
T3058 1011-1038 Protein denotes transcription factors NF-κB
T3057 944-950 Protein denotes IL-1Ra
T3056 882-887 Protein denotes NF-κB
T3055 842-846 Protein denotes IL-1
T3054 742-749 Negative_regulation denotes inhibit
T3053 742-749 Negative_regulation denotes inhibit
T3052 742-749 Negative_regulation denotes inhibit
T3051 758-766 Negative_regulation denotes blocking
T3050 767-772 Protein denotes NF-κB
T3049 750-754 Protein denotes IL-1
T3048 719-727 Protein denotes icIL-1Ra
T3047 711-717 Protein denotes IL-1Ra
T3046 640-649 Negative_regulation denotes deficient
T3045 607-615 Positive_regulation denotes enhanced
T3044 607-615 Positive_regulation denotes enhanced
T3043 560-573 Localization denotes translocation
T3042 560-573 Localization denotes translocation
T3041 552-559 Entity denotes Nuclear
T3040 633-639 Protein denotes IL-1Ra
T3039 584-587 Protein denotes p65
T3038 577-582 Protein denotes NF-κB
T3037 378-388 Regulation denotes regulation
T3036 404-414 Gene_expression denotes expression
T3035 509-511 Protein denotes PU
T3034 503-508 Protein denotes NF-κB
T3033 392-403 Protein denotes IL-1Ra gene
T3032 300-308 Negative_regulation denotes abrogate
T3031 340-344 Protein denotes IL-1
T3030 290-296 Protein denotes IL-1Ra
T3029 180-186 Protein denotes IL-1Ra
T3028 136-142 Protein denotes GM-CSF
T3027 130-134 Protein denotes IL-6
T3026 119-128 Protein denotes IL-1alpha
T3025 0-26 Protein denotes NF-κB transcription factor
R1940 T3030 T3032 causeOf IL-1Ra,abrogate
R1941 T3031 T3032 themeOf IL-1,abrogate
R1942 T3033 T3036 themeOf IL-1Ra gene,expression
R1945 T3036 T3037 themeOf expression,regulation
R1946 T3038 T3042 themeOf NF-κB,translocation
R1948 T3039 T3043 themeOf p65,translocation
R1949 T3040 T3046 themeOf IL-1Ra,deficient
R1950 T3041 T3042 locationOf Nuclear,translocation
R1951 T3041 T3043 locationOf Nuclear,translocation
R1952 T3042 T3044 themeOf translocation,enhanced
R1953 T3043 T3045 themeOf translocation,enhanced
R1954 T3047 T3052 themeOf IL-1Ra,inhibit
R1955 T3048 T3053 themeOf icIL-1Ra,inhibit
R1957 T3049 T3054 themeOf IL-1,inhibit
R1958 T3050 T3051 themeOf NF-κB,blocking
R1959 T3051 T3052 causeOf blocking,inhibit
R1960 T3051 T3053 causeOf blocking,inhibit
R1961 T3051 T3054 causeOf blocking,inhibit
R1962 T3055 T3062 causeOf IL-1,inducer
R1963 T3056 T3059 themeOf NF-κB,activation
R1965 T3057 T3060 themeOf IL-1Ra,expression
R1966 T3058 T3061 themeOf transcription factors NF-κB,activation
R1967 T3059 T3062 themeOf activation,inducer