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PMC:3342329 / 328-527 JSONTXT

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test3

Id Subject Object Predicate Lexical cue
T92 158-162 Protein denotes CCR5
T91 57-61 Protein denotes CCR5
T90 42-46 Protein denotes CCR5
T89 13-17 Protein denotes CCR5
T67 158-162 Protein denotes CCR5
T66 57-61 Protein denotes CCR5
T65 42-46 Protein denotes CCR5
T64 13-17 Protein denotes CCR5

testone

Id Subject Object Predicate Lexical cue
T31 158-162 Protein denotes CCR5
T30 57-61 Protein denotes CCR5
T29 42-46 Protein denotes CCR5
T28 13-17 Protein denotes CCR5

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T639 3-11 Negative_regulation denotes knockout
T623 158-162 Protein denotes CCR5
T622 57-61 Protein denotes CCR5
T621 42-46 Protein denotes CCR5
T620 13-17 Protein denotes CCR5
R341 T620 T639 themeOf CCR5,knockout

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T765 3-11 Negative_regulation denotes knockout
T749 158-162 Protein denotes CCR5
T748 57-61 Protein denotes CCR5
T747 42-46 Protein denotes CCR5
T746 13-17 Protein denotes CCR5
R410 T746 T765 themeOf CCR5,knockout

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T336 188-191 DT denotes the
T335 175-187 VB denotes investigated
T334 172-174 PRP denotes We
T333 166-170 NN denotes mice
T332 158-165 JJ denotes CCR5+/+
T331 155-157 TO denotes to
T330 146-154 VB denotes compared
T329 141-145 WRB denotes when
T328 136-140 NN denotes rate
T327 127-135 NN denotes survival
T326 117-126 VB denotes increased
T325 113-116 CC denotes and
T324 111-112 -COMMA- denotes ,
T323 105-111 NN denotes weight
T322 99-104 NN denotes tumor
T321 97-98 -COMMA- denotes ,
T320 91-97 NN denotes volume
T319 85-90 NN denotes tumor
T318 77-84 VB denotes reduced
T317 70-76 VB denotes showed
T316 65-69 NN denotes mice
T315 57-64 NN denotes CCR5−/−
T314 51-55 NN denotes mice
T313 49-50 -RRB- denotes )
T312 42-49 NN denotes CCR5+/+
T311 41-42 -LRB- denotes (
T310 36-40 NN denotes type
T309 31-35 JJ denotes wild
T308 27-30 CC denotes and
T307 22-26 NN denotes mice
T306 20-21 -RRB- denotes )
T305 13-20 NN denotes CCR5−/−
T304 12-13 -LRB- denotes (
T303 3-11 NN denotes knockout
R85 T303 T304 arg1Of knockout,(
R86 T305 T304 arg2Of CCR5−/−,(
R87 T306 T304 arg3Of ),(
R88 T307 T303 arg1Of mice,knockout
R89 T307 T308 arg1Of mice,and
R91 T310 T309 arg1Of type,wild
R92 T310 T311 arg1Of type,(
R93 T312 T311 arg2Of CCR5+/+,(
R94 T313 T311 arg3Of ),(
R95 T314 T308 arg2Of mice,and
R96 T314 T310 arg1Of mice,type
R97 T316 T315 arg1Of mice,CCR5−/−
R98 T316 T317 arg1Of mice,showed
R99 T316 T330 arg1Of mice,compared
R100 T317 T329 arg1Of showed,when
R101 T320 T318 arg2Of volume,reduced
R102 T320 T319 arg1Of volume,tumor
R103 T320 T321 arg1Of volume,","
R104 T321 T325 arg1Of ",",and
R105 T323 T321 arg2Of weight,","
R106 T323 T322 arg1Of weight,tumor
R107 T325 T317 arg2Of and,showed
R108 T325 T324 arg1Of and,","
R109 T328 T325 arg2Of rate,and
R110 T328 T326 arg2Of rate,increased
R111 T328 T327 arg1Of rate,survival
R112 T330 T329 arg2Of compared,when
R113 T330 T331 arg1Of compared,to
R114 T333 T331 arg2Of mice,to
R115 T333 T332 arg1Of mice,CCR5+/+
R116 T334 T335 arg1Of We,investigated

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T173 158-162 Protein denotes CCR5
T172 57-61 Protein denotes CCR5
T171 42-46 Protein denotes CCR5
T170 13-17 Protein denotes CCR5

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T539 158-162 http://www.uniprot.org/uniprot/P51681 denotes CCR5
T538 57-61 http://www.uniprot.org/uniprot/P51681 denotes CCR5
T537 42-46 http://www.uniprot.org/uniprot/P51681 denotes CCR5
T536 13-17 http://www.uniprot.org/uniprot/P51681 denotes CCR5

sentences

Id Subject Object Predicate Lexical cue
T122 57-171 Sentence denotes CCR5−/− mice showed reduced tumor volume, tumor weight, and increased survival rate when compared to CCR5+/+ mice.
T5 57-171 Sentence denotes CCR5−/− mice showed reduced tumor volume, tumor weight, and increased survival rate when compared to CCR5+/+ mice.

simple1

Id Subject Object Predicate Lexical cue
T246 158-162 Protein denotes CCR5
T245 57-61 Protein denotes CCR5
T244 42-46 Protein denotes CCR5
T243 13-17 Protein denotes CCR5

DLUT931

Id Subject Object Predicate Lexical cue
T579 3-11 Negative_regulation denotes knockout
T563 158-162 Protein denotes CCR5
T562 57-61 Protein denotes CCR5
T561 42-46 Protein denotes CCR5
T560 13-17 Protein denotes CCR5
R317 T560 T579 themeOf CCR5,knockout

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T802 155-170 Protein denotes to CCR5+/+ mice
T800 22-26 Protein denotes mice
T796 22-55 Protein denotes mice and wild type (CCR5+/+) mice
T794 65-69 Protein denotes mice

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T912 188-191 DT denotes the
T911 175-187 VBD denotes investigated
T910 172-174 PRP denotes We
T909 170-171 . denotes .
T908 166-170 NNS denotes mice
T907 164-165 NN denotes +
T906 163-164 NN denotes /
T905 162-163 CD denotes +
T904 158-162 CD denotes CCR5
T903 155-157 TO denotes to
T902 146-154 VBN denotes compared
T901 141-145 WRB denotes when
T900 136-140 NN denotes rate
T899 127-135 NN denotes survival
T898 117-126 VBD denotes increased
T897 113-116 CC denotes and
T896 111-112 , denotes ,
T895 105-111 NN denotes weight
T894 99-104 NN denotes tumor
T893 97-98 , denotes ,
T892 91-97 NN denotes volume
T891 85-90 NN denotes tumor
T890 77-84 VBN denotes reduced
T889 70-76 VBD denotes showed
T888 65-69 NNS denotes mice
T887 63-64 NN denotes −
T886 62-63 NN denotes /
T885 61-62 CD denotes −
T884 57-61 CD denotes CCR5
T883 55-56 . denotes .
T882 51-55 NNS denotes mice
T881 49-50 -RRB- denotes )
T880 48-49 NN denotes +
T879 47-48 NN denotes /
T878 46-47 CD denotes +
T877 42-46 CD denotes CCR5
T876 41-42 -LRB- denotes (
T875 36-40 NN denotes type
T874 31-35 JJ denotes wild
T873 27-30 CC denotes and
T872 22-26 NNS denotes mice
T871 20-21 -RRB- denotes )
T870 19-20 NN denotes −
T869 18-19 NN denotes /
T868 17-18 CD denotes −
T867 13-17 CD denotes CCR5
T866 12-13 -LRB- denotes (
T865 3-11 NN denotes knockout
R471 T866 T865 punct (,knockout
R472 T867 T868 nummod CCR5,−
R473 T868 T870 nummod −,−
R474 T869 T870 compound /,−
R475 T870 T865 appos −,knockout
R476 T871 T865 punct ),knockout
R478 T873 T872 cc and,mice
R479 T874 T875 amod wild,type
R480 T875 T872 conj type,mice
R481 T876 T880 punct (,+
R482 T877 T880 nummod CCR5,+
R483 T878 T880 nummod +,+
R484 T879 T880 compound /,+
R485 T880 T875 appos +,type
R486 T881 T880 punct ),+
R487 T882 T875 conj mice,type
R489 T884 T888 nummod CCR5,mice
R490 T885 T888 nummod −,mice
R491 T886 T888 compound /,mice
R492 T887 T888 compound −,mice
R493 T888 T889 nsubj mice,showed
R494 T889 T889 ROOT showed,showed
R495 T890 T892 amod reduced,volume
R496 T891 T892 compound tumor,volume
R497 T892 T889 dobj volume,showed
R498 T893 T892 punct ",",volume
R499 T894 T895 compound tumor,weight
R500 T895 T892 conj weight,volume
R501 T896 T889 punct ",",showed
R502 T897 T889 cc and,showed
R503 T898 T900 amod increased,rate
R504 T899 T900 compound survival,rate
R505 T900 T902 dobj rate,compared
R506 T901 T902 advmod when,compared
R507 T902 T889 conj compared,showed
R508 T903 T902 prep to,compared
R509 T904 T908 nummod CCR5,mice
R510 T905 T908 nummod +,mice
R511 T906 T908 compound /,mice
R512 T907 T908 compound +,mice
R513 T908 T903 pobj mice,to
R514 T909 T889 punct .,showed
R515 T910 T911 nsubj We,investigated
R516 T911 T911 ROOT investigated,investigated

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T653 158-162 Protein denotes CCR5