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PMC:3342329 / 16841-17068 JSONTXT

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test3

Id Subject Object Predicate Lexical cue
T7312 114-118 Protein denotes CCR5
T7311 97-101 Protein denotes CCR5
T7291 114-118 Protein denotes CCR5
T7290 97-101 Protein denotes CCR5

testone

Id Subject Object Predicate Lexical cue
T7270 114-118 Protein denotes CCR5
T7269 97-101 Protein denotes CCR5

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T8015 114-118 Protein denotes CCR5
T8014 97-101 Protein denotes CCR5

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T7892 114-118 Protein denotes CCR5
T7891 97-101 Protein denotes CCR5

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T7577 202-208 NN denotes number
T7576 197-201 NN denotes cell
T7575 188-196 JJ denotes reactive
T7574 183-187 NN denotes CD57
T7573 179-182 CC denotes and
T7572 175-178 NN denotes CD8
T7571 171-174 DT denotes the
T7570 162-170 VB denotes analyzed
T7569 157-161 RB denotes also
T7568 154-156 PRP denotes we
T7567 152-153 -COMMA- denotes ,
T7566 147-152 NN denotes organ
T7565 130-146 JJ denotes immunity-related
T7564 127-129 IN denotes in
T7563 122-126 NN denotes mice
T7562 114-121 NN denotes CCR5−/−
T7561 110-113 CC denotes and
T7560 105-109 NN denotes mice
T7559 97-104 JJ denotes CCR5+/+
T7558 89-96 IN denotes between
T7557 83-88 NN denotes cells
T7556 80-82 NN denotes NK
T7555 74-79 JJ denotes CD57+
T7554 70-73 CC denotes and
T7553 64-69 NN denotes cells
T7552 62-63 NN denotes T
T7551 57-61 JJ denotes CD8+
T7550 54-56 IN denotes of
T7549 46-53 NN denotes numbers
T7548 42-45 DT denotes the
T7547 39-41 IN denotes in
T7546 27-38 NN denotes differences
T7545 23-26 DT denotes the
T7544 11-22 VB denotes investigate
T7543 3-10 RB denotes further
T7542 0-2 TO denotes To
T7580 219-226 NN denotes tissues
T7579 212-218 NN denotes spleen
T7578 209-211 IN denotes in
R5022 T7544 T7542 arg1Of investigate,To
R5023 T7544 T7543 arg1Of investigate,further
R5024 T7546 T7544 arg2Of differences,investigate
R5025 T7546 T7545 arg1Of differences,the
R5026 T7546 T7547 arg1Of differences,in
R5027 T7546 T7558 arg1Of differences,between
R5028 T7549 T7547 arg2Of numbers,in
R5029 T7549 T7548 arg1Of numbers,the
R5030 T7549 T7550 arg1Of numbers,of
R5031 T7553 T7551 arg1Of cells,CD8+
R5032 T7553 T7552 arg1Of cells,T
R5033 T7553 T7554 arg1Of cells,and
R5034 T7554 T7550 arg2Of and,of
R5035 T7557 T7554 arg2Of cells,and
R5036 T7557 T7555 arg1Of cells,CD57+
R5037 T7557 T7556 arg1Of cells,NK
R5038 T7560 T7559 arg1Of mice,CCR5+/+
R5039 T7560 T7561 arg1Of mice,and
R5040 T7561 T7558 arg2Of and,between
R5041 T7561 T7564 arg1Of and,in
R5042 T7563 T7561 arg2Of mice,and
R5043 T7563 T7562 arg1Of mice,CCR5−/−
R5044 T7566 T7564 arg2Of organ,in
R5045 T7566 T7565 arg1Of organ,immunity-related
R5046 T7568 T7544 arg1Of we,investigate
R5047 T7568 T7570 arg1Of we,analyzed
R5048 T7570 T7542 modOf analyzed,To
R5049 T7570 T7567 arg1Of analyzed,","
R5050 T7570 T7569 arg1Of analyzed,also
R5051 T7572 T7573 arg1Of CD8,and
R5052 T7574 T7573 arg2Of CD57,and
R5053 T7577 T7570 arg2Of number,analyzed
R5054 T7577 T7571 arg1Of number,the
R5055 T7577 T7572 arg1Of number,CD8
R5056 T7577 T7574 arg1Of number,CD57
R5057 T7577 T7575 arg1Of number,reactive
R5058 T7577 T7576 arg1Of number,cell
R5059 T7577 T7578 arg1Of number,in
R5060 T7580 T7578 arg2Of tissues,in
R5061 T7580 T7579 arg1Of tissues,spleen

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T7379 114-118 Protein denotes CCR5
T7378 97-101 Protein denotes CCR5

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T7933 114-118 http://www.uniprot.org/uniprot/P51681 denotes CCR5
T7932 97-101 http://www.uniprot.org/uniprot/P51681 denotes CCR5
T7924 175-178 http://www.uniprot.org/uniprot/P10966 denotes CD8
T7923 57-60 http://www.uniprot.org/uniprot/P10966 denotes CD8
T7914 175-178 http://www.uniprot.org/uniprot/P01732 denotes CD8
T7913 57-60 http://www.uniprot.org/uniprot/P01732 denotes CD8

UBERON-AE

Id Subject Object Predicate Lexical cue
T7341 147-152 http://purl.obolibrary.org/obo/UBERON_0000062 denotes organ
T7337 219-226 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissues
T7331 212-218 http://purl.obolibrary.org/obo/UBERON_0002106 denotes spleen

GO-CC

Id Subject Object Predicate Lexical cue
T7406 83-88 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T7405 64-69 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T7346 0-227 Sentence denotes To further investigate the differences in the numbers of CD8+ T cells and CD57+ NK cells between CCR5+/+ mice and CCR5−/− mice in immunity-related organ, we also analyzed the CD8 and CD57 reactive cell number in spleen tissues.
T135 0-227 Sentence denotes To further investigate the differences in the numbers of CD8+ T cells and CD57+ NK cells between CCR5+/+ mice and CCR5−/− mice in immunity-related organ, we also analyzed the CD8 and CD57 reactive cell number in spleen tissues.

simple1

Id Subject Object Predicate Lexical cue
T7417 114-118 Protein denotes CCR5
T7416 97-101 Protein denotes CCR5

DLUT931

Id Subject Object Predicate Lexical cue
T7969 114-118 Protein denotes CCR5
T7968 97-101 Protein denotes CCR5

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T8670 120-153 Localization denotes − mice in immunity-related organ,
T8659 97-109 Protein denotes CCR5+/+ mice
T8652 74-88 Entity denotes CD57+ NK cells
T8646 54-69 Entity denotes of CD8+ T cells
T8643 114-119 Protein denotes CCR5−
T8632 183-187 Protein denotes CD57
T8618 120-153 Protein denotes − mice in immunity-related organ,
T8611 171-178 Protein denotes the CD8
R5871 T8618 T8670 themeOf "− mice in immunity-related organ,","− mice in immunity-related organ,"

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T8274 226-227 . denotes .
T8273 219-226 NNS denotes tissues
T8272 212-218 JJ denotes spleen
T8271 209-211 IN denotes in
T8270 202-208 NN denotes number
T8269 197-201 NN denotes cell
T8268 188-196 JJ denotes reactive
T8267 183-187 NNP denotes CD57
T8266 179-182 CC denotes and
T8265 175-178 NNP denotes CD8
T8264 171-174 DT denotes the
T8263 162-170 VBD denotes analyzed
T8262 157-161 RB denotes also
T8261 154-156 PRP denotes we
T8260 152-153 , denotes ,
T8259 147-152 NN denotes organ
T8258 130-146 JJ denotes immunity-related
T8257 127-129 IN denotes in
T8256 122-126 NNS denotes mice
T8255 120-121 CD denotes −
T8254 119-120 CD denotes /
T8253 118-119 VBP denotes −
T8252 114-118 NNS denotes CCR5
T8251 110-113 CC denotes and
T8250 105-109 NNS denotes mice
T8249 103-104 NN denotes +
T8248 102-103 NN denotes /
T8247 101-102 CD denotes +
T8246 97-101 CD denotes CCR5
T8245 89-96 IN denotes between
T8244 83-88 NNS denotes cells
T8243 80-82 NNP denotes NK
T8242 78-79 NNP denotes +
T8241 74-78 NNP denotes CD57
T8240 70-73 CC denotes and
T8239 64-69 NNS denotes cells
T8238 62-63 NNP denotes T
T8237 60-61 CD denotes +
T8236 57-60 CD denotes CD8
T8235 54-56 IN denotes of
T8234 46-53 NNS denotes numbers
T8233 42-45 DT denotes the
T8232 39-41 IN denotes in
T8231 27-38 NNS denotes differences
T8230 23-26 DT denotes the
T8229 11-22 VB denotes investigate
T8228 3-10 RBR denotes further
T8227 0-2 TO denotes To
R5492 T8227 T8229 aux To,investigate
R5493 T8228 T8229 advmod further,investigate
R5494 T8229 T8263 advcl investigate,analyzed
R5495 T8230 T8231 det the,differences
R5496 T8231 T8229 dobj differences,investigate
R5497 T8232 T8231 prep in,differences
R5498 T8233 T8234 det the,numbers
R5499 T8234 T8232 pobj numbers,in
R5500 T8235 T8234 prep of,numbers
R5501 T8236 T8239 nummod CD8,cells
R5502 T8237 T8239 nummod +,cells
R5503 T8238 T8239 compound T,cells
R5504 T8239 T8235 pobj cells,of
R5505 T8240 T8239 cc and,cells
R5506 T8241 T8243 compound CD57,NK
R5507 T8242 T8243 compound +,NK
R5508 T8243 T8244 compound NK,cells
R5509 T8244 T8239 conj cells,cells
R5510 T8245 T8231 prep between,differences
R5511 T8246 T8250 nummod CCR5,mice
R5512 T8247 T8250 nummod +,mice
R5513 T8248 T8250 compound /,mice
R5514 T8249 T8250 compound +,mice
R5515 T8250 T8245 pobj mice,between
R5516 T8251 T8250 cc and,mice
R5517 T8252 T8250 conj CCR5,mice
R5518 T8253 T8263 prep −,analyzed
R5519 T8254 T8256 nummod /,mice
R5520 T8255 T8256 nummod −,mice
R5521 T8256 T8253 dobj mice,−
R5522 T8257 T8253 prep in,−
R5523 T8258 T8259 amod immunity-related,organ
R5524 T8259 T8257 pobj organ,in
R5525 T8260 T8263 punct ",",analyzed
R5526 T8261 T8263 nsubj we,analyzed
R5527 T8262 T8263 advmod also,analyzed
R5528 T8263 T8263 ROOT analyzed,analyzed
R5529 T8264 T8265 det the,CD8
R5530 T8265 T8270 nmod CD8,number
R5531 T8266 T8265 cc and,CD8
R5532 T8267 T8265 conj CD57,CD8
R5533 T8268 T8270 amod reactive,number
R5534 T8269 T8270 compound cell,number
R5535 T8270 T8263 dobj number,analyzed
R5536 T8271 T8270 prep in,number
R5537 T8272 T8273 compound spleen,tissues
R5538 T8273 T8271 pobj tissues,in
R5539 T8274 T8263 punct .,analyzed

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T8043 183-187 Protein denotes CD57
T8042 175-178 Protein denotes CD8
T8041 97-101 Protein denotes CCR5
T8040 74-79 Protein denotes CD57+
T8039 57-61 Protein denotes CD8+