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PMC:3333881 / 9170-9319 JSONTXT

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2_test

Id Subject Object Predicate Lexical cue
22187158-17942396-77584440 145-147 17942396 denotes 50

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T6096 0-5 NN denotes PBMCs
T6097 5-6 -COMMA- denotes ,
T6098 7-13 NN denotes Jurkat
T6099 14-16 CC denotes or
T6100 17-21 NN denotes U937
T6101 22-27 NN denotes cells
T6102 28-29 -LRB- denotes (
T6103 29-36 CD denotes 5 × 107
T6104 36-37 -RRB- denotes )
T6105 38-42 VB denotes were
T6106 43-51 VB denotes infected
T6107 52-56 IN denotes with
T6108 57-61 NN denotes HXB2
T6109 62-77 JJ denotes Env-pseudotyped
T6110 78-85 NN denotes virions
T6111 86-87 -LRB- denotes (
T6112 87-93 CD denotes 500 ng
T6113 94-96 IN denotes of
T6114 97-100 NN denotes p24
T6115 100-101 -RRB- denotes )
T6116 102-104 IN denotes by
T6117 105-118 NN denotes spinoculation
T6118 118-119 -COMMA- denotes ,
T6119 120-122 IN denotes as
T6120 123-133 RB denotes previously
T6121 134-143 VB denotes described
T6122 144-145 -LRB- denotes (
T6123 145-147 CD denotes 50
T6124 147-148 -RRB- denotes )
R5226 T6096 T6097 arg1Of PBMCs,","
R5227 T6097 T6099 arg1Of ",",or
R5228 T6098 T6097 arg2Of Jurkat,","
R5229 T6099 T6102 arg1Of or,(
R5230 T6099 T6105 arg1Of or,were
R5231 T6099 T6106 arg2Of or,infected
R5232 T6101 T6099 arg2Of cells,or
R5233 T6101 T6100 arg1Of cells,U937
R5234 T6103 T6102 arg2Of 5 × 107,(
R5235 T6104 T6102 arg3Of ),(
R5236 T6106 T6105 arg2Of infected,were
R5237 T6106 T6107 arg1Of infected,with
R5238 T6110 T6107 arg2Of virions,with
R5239 T6110 T6108 arg1Of virions,HXB2
R5240 T6110 T6109 arg1Of virions,Env-pseudotyped
R5241 T6110 T6111 arg1Of virions,(
R5242 T6110 T6116 arg1Of virions,by
R5243 T6110 T6118 arg1Of virions,","
R5244 T6110 T6119 arg1Of virions,as
R5245 T6112 T6111 arg2Of 500 ng,(
R5246 T6112 T6113 arg1Of 500 ng,of
R5247 T6114 T6113 arg2Of p24,of
R5248 T6115 T6111 arg3Of ),(
R5249 T6117 T6116 arg2Of spinoculation,by
R5250 T6121 T6119 arg2Of described,as
R5251 T6121 T6120 arg1Of described,previously
R5252 T6121 T6122 arg1Of described,(
R5253 T6123 T6122 arg2Of 50,(
R5254 T6124 T6122 arg3Of ),(

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T6200 0-5 NNS denotes PBMCs
T6201 5-6 , denotes ,
T6202 7-13 NNP denotes Jurkat
T6203 14-16 CC denotes or
T6204 17-21 NNP denotes U937
T6205 22-27 NNS denotes cells
T6206 28-29 -LRB- denotes (
T6207 29-30 CD denotes 5
T6208 31-32 RB denotes ×
T6209 33-36 CD denotes 107
T6210 36-37 -RRB- denotes )
T6211 38-42 VBD denotes were
T6212 43-51 VBN denotes infected
T6213 52-56 IN denotes with
T6214 57-61 NNP denotes HXB2
T6215 62-77 JJ denotes Env-pseudotyped
T6216 78-85 NNS denotes virions
T6217 86-87 -LRB- denotes (
T6218 87-90 CD denotes 500
T6219 91-93 NN denotes ng
T6220 94-96 IN denotes of
T6221 97-100 CD denotes p24
T6222 100-101 -RRB- denotes )
T6223 102-104 IN denotes by
T6224 105-118 NN denotes spinoculation
T6225 118-119 , denotes ,
T6226 120-122 IN denotes as
T6227 123-133 RB denotes previously
T6228 134-143 VBN denotes described
T6229 144-145 -LRB- denotes (
T6230 145-147 CD denotes 50
T6231 147-148 -RRB- denotes )
T6232 148-149 . denotes .
R5316 T6200 T6212 nsubjpass PBMCs,infected
R5317 T6201 T6200 punct ",",PBMCs
R5318 T6202 T6200 conj Jurkat,PBMCs
R5319 T6203 T6202 cc or,Jurkat
R5320 T6204 T6202 conj U937,Jurkat
R5321 T6205 T6202 conj cells,Jurkat
R5322 T6206 T6205 punct (,cells
R5323 T6207 T6209 quantmod 5,107
R5324 T6208 T6209 quantmod ×,107
R5325 T6209 T6205 appos 107,cells
R5326 T6210 T6205 punct ),cells
R5327 T6211 T6212 auxpass were,infected
R5328 T6212 T6212 ROOT infected,infected
R5329 T6213 T6212 prep with,infected
R5330 T6214 T6216 nmod HXB2,virions
R5331 T6215 T6216 compound Env-pseudotyped,virions
R5332 T6216 T6213 pobj virions,with
R5333 T6217 T6219 punct (,ng
R5334 T6218 T6219 nummod 500,ng
R5335 T6219 T6216 appos ng,virions
R5336 T6220 T6219 prep of,ng
R5337 T6221 T6220 pobj p24,of
R5338 T6222 T6219 punct ),ng
R5339 T6223 T6219 prep by,ng
R5340 T6224 T6223 pobj spinoculation,by
R5341 T6225 T6219 punct ",",ng
R5342 T6226 T6228 mark as,described
R5343 T6227 T6228 advmod previously,described
R5344 T6228 T6219 advcl described,ng
R5345 T6229 T6228 punct (,described
R5346 T6230 T6228 npadvmod 50,described
R5347 T6231 T6219 punct ),ng
R5348 T6232 T6212 punct .,infected

GO-CC

Id Subject Object Predicate Lexical cue
T6240 78-85 http://purl.obolibrary.org/obo/GO_0019012 denotes virions
T6242 22-27 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T6048 0-149 Sentence denotes PBMCs, Jurkat or U937 cells (5 × 107) were infected with HXB2 Env-pseudotyped virions (500 ng of p24) by spinoculation, as previously described (50).
T58 0-149 Sentence denotes PBMCs, Jurkat or U937 cells (5 × 107) were infected with HXB2 Env-pseudotyped virions (500 ng of p24) by spinoculation, as previously described (50).

events-check-again

Id Subject Object Predicate Lexical cue
T6266 62-65 Protein denotes Env
T6267 97-100 Protein denotes p24

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T6269 57-65 Protein denotes HXB2 Env
T6270 97-100 Protein denotes p24

test2

Id Subject Object Predicate Lexical cue
T6039 62-65 Protein denotes Env
T6040 97-100 Protein denotes p24

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T6043 62-65 Protein denotes Env
T6044 97-100 Protein denotes p24

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T6134 62-65 P04578 denotes Env
T6135 97-100 P04591 denotes p24
T6136 97-100 P04585 denotes p24
T6137 97-100 P12497 denotes p24
T6138 97-100 P03366 denotes p24