PMC:3333881 / 43632-44044
Annnotations
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
22187158-15536134-77584469 | 206-208 | 15536134 | denotes | 65 |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T29104 | 0-5 | NN | denotes | Model |
T29105 | 6-8 | IN | denotes | of |
T29106 | 9-15 | NN | denotes | MIP-1α |
T29107 | 16-31 | JJ | denotes | transcriptional |
T29108 | 32-42 | NN | denotes | activation |
T29109 | 43-45 | IN | denotes | by |
T29110 | 46-51 | NN | denotes | HIV-1 |
T29111 | 52-56 | NN | denotes | Tat. |
T29112 | 57-58 | -LRB- | denotes | ( |
T29113 | 58-59 | NN | denotes | A |
T29114 | 59-60 | -RRB- | denotes | ) |
T29115 | 61-63 | IN | denotes | In |
T29116 | 64-71 | NN | denotes | absence |
T29117 | 72-74 | IN | denotes | of |
T29118 | 75-78 | NN | denotes | Tat |
T29119 | 78-79 | -COMMA- | denotes | , |
T29120 | 80-85 | NNP | denotes | IκB-α |
T29121 | 86-94 | VB | denotes | occupies |
T29122 | 95-98 | DT | denotes | the |
T29123 | 99-104 | NN | denotes | NF-κB |
T29124 | 105-113 | NN | denotes | enhancer |
T29125 | 114-116 | IN | denotes | of |
T29126 | 117-120 | DT | denotes | the |
T29127 | 121-127 | NN | denotes | MIP-1α |
T29128 | 128-136 | NN | denotes | promoter |
T29129 | 137-140 | CC | denotes | and |
T29130 | 141-147 | RB | denotes | likely |
T29131 | 148-157 | VB | denotes | interacts |
T29132 | 158-162 | IN | denotes | with |
T29133 | 163-178 | JJ | denotes | transcriptional |
T29134 | 179-189 | NN | denotes | repressors |
T29135 | 189-190 | -COMMA- | denotes | , |
T29136 | 191-195 | JJ | denotes | such |
T29137 | 196-198 | IN | denotes | as |
T29138 | 199-204 | NN | denotes | HDACs |
T29139 | 205-206 | -LRB- | denotes | ( |
T29140 | 206-208 | CD | denotes | 65 |
T29141 | 208-209 | -RRB- | denotes | ) |
T29142 | 209-210 | -COMMA- | denotes | , |
T29143 | 211-213 | TO | denotes | to |
T29144 | 214-221 | VB | denotes | inhibit |
T29145 | 222-226 | NN | denotes | gene |
T29146 | 227-241 | NN | denotes | transcription. |
T29147 | 242-243 | -LRB- | denotes | ( |
T29148 | 243-244 | NN | denotes | B |
T29149 | 244-245 | -RRB- | denotes | ) |
T29150 | 246-249 | NN | denotes | Tat |
T29151 | 250-259 | VB | denotes | activates |
T29152 | 260-263 | DT | denotes | the |
T29153 | 264-270 | NN | denotes | MIP-1α |
T29154 | 271-281 | NN | denotes | expression |
T29155 | 282-284 | IN | denotes | by |
T29156 | 285-293 | VB | denotes | removing |
T29157 | 294-297 | DT | denotes | the |
T29158 | 298-303 | JJ | denotes | IκB-α |
T29159 | 304-313 | NN | denotes | repressor |
T29160 | 314-318 | IN | denotes | from |
T29161 | 319-322 | DT | denotes | the |
T29162 | 323-328 | NN | denotes | NF-κB |
T29163 | 329-337 | NN | denotes | enhancer |
T29164 | 337-338 | -COMMA- | denotes | , |
T29165 | 339-342 | CC | denotes | and |
T29166 | 343-345 | IN | denotes | by |
T29167 | 346-356 | VB | denotes | increasing |
T29168 | 357-360 | DT | denotes | the |
T29169 | 361-368 | NN | denotes | binding |
T29170 | 369-371 | IN | denotes | of |
T29171 | 372-375 | NN | denotes | p65 |
T29172 | 376-381 | NN | denotes | NF-κB |
T29173 | 382-389 | NN | denotes | complex |
T29174 | 390-392 | TO | denotes | to |
T29175 | 393-396 | DT | denotes | the |
T29176 | 397-402 | NN | denotes | NF-κB |
T29177 | 403-411 | NN | denotes | enhancer |
R22703 | T29104 | T29105 | arg1Of | Model,of |
R22704 | T29104 | T29109 | arg1Of | Model,by |
R22705 | T29104 | T29121 | arg1Of | Model,occupies |
R22706 | T29104 | T29131 | arg1Of | Model,interacts |
R22707 | T29104 | T29167 | arg1Of | Model,increasing |
R22708 | T29108 | T29105 | arg2Of | activation,of |
R22709 | T29108 | T29106 | arg1Of | activation,MIP-1α |
R22710 | T29108 | T29107 | arg1Of | activation,transcriptional |
R22711 | T29111 | T29109 | arg2Of | Tat.,by |
R22712 | T29111 | T29110 | arg1Of | Tat.,HIV-1 |
R22713 | T29111 | T29112 | arg1Of | Tat.,( |
R22714 | T29111 | T29115 | arg1Of | Tat.,In |
R22715 | T29113 | T29112 | arg2Of | A,( |
R22716 | T29114 | T29112 | arg3Of | ),( |
R22717 | T29116 | T29115 | arg2Of | absence,In |
R22718 | T29116 | T29117 | arg1Of | absence,of |
R22719 | T29116 | T29119 | arg1Of | absence,"," |
R22720 | T29118 | T29117 | arg2Of | Tat,of |
R22721 | T29120 | T29119 | arg2Of | IκB-α,"," |
R22722 | T29121 | T29129 | arg1Of | occupies,and |
R22723 | T29124 | T29121 | arg2Of | enhancer,occupies |
R22724 | T29124 | T29122 | arg1Of | enhancer,the |
R22725 | T29124 | T29123 | arg1Of | enhancer,NF-κB |
R22726 | T29124 | T29125 | arg1Of | enhancer,of |
R22727 | T29128 | T29125 | arg2Of | promoter,of |
R22728 | T29128 | T29126 | arg1Of | promoter,the |
R22729 | T29128 | T29127 | arg1Of | promoter,MIP-1α |
R22730 | T29129 | T29135 | arg1Of | and,"," |
R22731 | T29129 | T29137 | arg1Of | and,as |
R22732 | T29129 | T29166 | arg1Of | and,by |
R22733 | T29131 | T29129 | arg2Of | interacts,and |
R22734 | T29131 | T29130 | arg1Of | interacts,likely |
R22735 | T29131 | T29132 | arg1Of | interacts,with |
R22736 | T29134 | T29132 | arg2Of | repressors,with |
R22737 | T29134 | T29133 | arg1Of | repressors,transcriptional |
R22738 | T29137 | T29165 | arg1Of | as,and |
R22739 | T29138 | T29139 | arg1Of | HDACs,( |
R22740 | T29138 | T29142 | arg1Of | HDACs,"," |
R22741 | T29138 | T29151 | arg1Of | HDACs,activates |
R22742 | T29138 | T29156 | arg1Of | HDACs,removing |
R22743 | T29140 | T29139 | arg2Of | 65,( |
R22744 | T29141 | T29139 | arg3Of | ),( |
R22745 | T29144 | T29142 | arg2Of | inhibit,"," |
R22746 | T29144 | T29143 | arg1Of | inhibit,to |
R22747 | T29148 | T29147 | arg2Of | B,( |
R22748 | T29149 | T29147 | arg3Of | ),( |
R22749 | T29150 | T29144 | arg2Of | Tat,inhibit |
R22750 | T29150 | T29145 | arg1Of | Tat,gene |
R22751 | T29150 | T29146 | arg1Of | Tat,transcription. |
R22752 | T29150 | T29147 | arg1Of | Tat,( |
R22753 | T29151 | T29137 | arg2Of | activates,as |
R22754 | T29151 | T29155 | arg1Of | activates,by |
R22755 | T29154 | T29151 | arg2Of | expression,activates |
R22756 | T29154 | T29152 | arg1Of | expression,the |
R22757 | T29154 | T29153 | arg1Of | expression,MIP-1α |
R22758 | T29156 | T29155 | arg2Of | removing,by |
R22759 | T29159 | T29156 | arg2Of | repressor,removing |
R22760 | T29159 | T29157 | arg1Of | repressor,the |
R22761 | T29159 | T29158 | arg1Of | repressor,IκB-α |
R22762 | T29159 | T29160 | arg1Of | repressor,from |
R22763 | T29163 | T29160 | arg2Of | enhancer,from |
R22764 | T29163 | T29161 | arg1Of | enhancer,the |
R22765 | T29163 | T29162 | arg1Of | enhancer,NF-κB |
R22766 | T29165 | T29136 | arg1Of | and,such |
R22767 | T29165 | T29164 | arg1Of | and,"," |
R22768 | T29166 | T29165 | arg2Of | by,and |
R22769 | T29167 | T29166 | arg2Of | increasing,by |
R22770 | T29169 | T29167 | arg2Of | binding,increasing |
R22771 | T29169 | T29168 | arg1Of | binding,the |
R22772 | T29169 | T29170 | arg1Of | binding,of |
R22773 | T29169 | T29174 | arg1Of | binding,to |
R22774 | T29173 | T29170 | arg2Of | complex,of |
R22775 | T29173 | T29171 | arg1Of | complex,p65 |
R22776 | T29173 | T29172 | arg1Of | complex,NF-κB |
R22777 | T29177 | T29174 | arg2Of | enhancer,to |
R22778 | T29177 | T29175 | arg1Of | enhancer,the |
R22779 | T29177 | T29176 | arg1Of | enhancer,NF-κB |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T29196 | 0-5 | NNP | denotes | Model |
T29197 | 6-8 | IN | denotes | of |
T29198 | 9-15 | NNP | denotes | MIP-1α |
T29199 | 16-31 | JJ | denotes | transcriptional |
T29200 | 32-42 | NN | denotes | activation |
T29201 | 43-45 | IN | denotes | by |
T29202 | 46-51 | NNP | denotes | HIV-1 |
T29203 | 52-55 | NNP | denotes | Tat |
T29204 | 55-56 | . | denotes | . |
T29205 | 57-58 | -LRB- | denotes | ( |
T29206 | 58-59 | NNP | denotes | A |
T29207 | 59-60 | -RRB- | denotes | ) |
T29208 | 61-63 | IN | denotes | In |
T29209 | 64-71 | NN | denotes | absence |
T29210 | 72-74 | IN | denotes | of |
T29211 | 75-78 | NNP | denotes | Tat |
T29212 | 78-79 | , | denotes | , |
T29213 | 80-85 | NNP | denotes | IκB-α |
T29214 | 86-94 | VBZ | denotes | occupies |
T29215 | 95-98 | DT | denotes | the |
T29216 | 99-104 | JJ | denotes | NF-κB |
T29217 | 105-113 | NN | denotes | enhancer |
T29218 | 114-116 | IN | denotes | of |
T29219 | 117-120 | DT | denotes | the |
T29245 | 250-259 | VBZ | denotes | activates |
T29246 | 260-263 | DT | denotes | the |
T29247 | 264-270 | JJ | denotes | MIP-1α |
T29248 | 271-281 | NN | denotes | expression |
T29249 | 282-284 | IN | denotes | by |
T29250 | 285-293 | VBG | denotes | removing |
T29251 | 294-297 | DT | denotes | the |
T29252 | 298-303 | JJ | denotes | IκB-α |
T29253 | 304-313 | NN | denotes | repressor |
T29254 | 314-318 | IN | denotes | from |
T29255 | 319-322 | DT | denotes | the |
T29256 | 323-328 | NNP | denotes | NF-κB |
T29257 | 329-337 | NN | denotes | enhancer |
T29258 | 337-338 | , | denotes | , |
T29259 | 339-342 | CC | denotes | and |
T29260 | 343-345 | IN | denotes | by |
T29261 | 346-356 | VBG | denotes | increasing |
T29262 | 357-360 | DT | denotes | the |
T29263 | 361-368 | JJ | denotes | binding |
T29264 | 369-371 | IN | denotes | of |
T29265 | 372-375 | CD | denotes | p65 |
T29266 | 376-381 | JJ | denotes | NF-κB |
T29267 | 382-389 | NN | denotes | complex |
T29268 | 390-392 | TO | denotes | to |
T29269 | 393-396 | DT | denotes | the |
T29270 | 397-402 | JJ | denotes | NF-κB |
T29271 | 403-411 | NN | denotes | enhancer |
T29272 | 411-412 | . | denotes | . |
T29220 | 121-127 | JJ | denotes | MIP-1α |
T29221 | 128-136 | NN | denotes | promoter |
T29222 | 137-140 | CC | denotes | and |
T29223 | 141-147 | JJ | denotes | likely |
T29224 | 148-157 | NNS | denotes | interacts |
T29225 | 158-162 | IN | denotes | with |
T29226 | 163-178 | JJ | denotes | transcriptional |
T29227 | 179-189 | NNS | denotes | repressors |
T29228 | 189-190 | , | denotes | , |
T29229 | 191-195 | JJ | denotes | such |
T29230 | 196-198 | IN | denotes | as |
T29231 | 199-204 | NNS | denotes | HDACs |
T29232 | 205-206 | -LRB- | denotes | ( |
T29233 | 206-208 | CD | denotes | 65 |
T29234 | 208-209 | -RRB- | denotes | ) |
T29235 | 209-210 | , | denotes | , |
T29236 | 211-213 | TO | denotes | to |
T29237 | 214-221 | VB | denotes | inhibit |
T29238 | 222-226 | NN | denotes | gene |
T29239 | 227-240 | NN | denotes | transcription |
T29240 | 240-241 | . | denotes | . |
T29241 | 242-243 | -LRB- | denotes | ( |
T29242 | 243-244 | NNP | denotes | B |
T29243 | 244-245 | -RRB- | denotes | ) |
T29244 | 246-249 | NNP | denotes | Tat |
R22780 | T29196 | T29196 | ROOT | Model,Model |
R22781 | T29197 | T29196 | prep | of,Model |
R22782 | T29198 | T29200 | nmod | MIP-1α,activation |
R22783 | T29199 | T29200 | amod | transcriptional,activation |
R22784 | T29200 | T29197 | pobj | activation,of |
R22785 | T29201 | T29200 | prep | by,activation |
R22786 | T29202 | T29203 | compound | HIV-1,Tat |
R22787 | T29203 | T29201 | pobj | Tat,by |
R22788 | T29204 | T29196 | punct | .,Model |
R22789 | T29205 | T29206 | punct | (,A |
R22790 | T29206 | T29206 | ROOT | A,A |
R22791 | T29207 | T29206 | punct | ),A |
R22792 | T29208 | T29214 | prep | In,occupies |
R22793 | T29209 | T29208 | pobj | absence,In |
R22794 | T29210 | T29209 | prep | of,absence |
R22795 | T29211 | T29210 | pobj | Tat,of |
R22796 | T29212 | T29214 | punct | ",",occupies |
R22797 | T29213 | T29214 | nsubj | IκB-α,occupies |
R22798 | T29214 | T29214 | ROOT | occupies,occupies |
R22799 | T29215 | T29217 | det | the,enhancer |
R22800 | T29216 | T29217 | amod | NF-κB,enhancer |
R22801 | T29217 | T29214 | dobj | enhancer,occupies |
R22802 | T29218 | T29217 | prep | of,enhancer |
R22803 | T29219 | T29221 | det | the,promoter |
R22804 | T29220 | T29221 | amod | MIP-1α,promoter |
R22805 | T29221 | T29218 | pobj | promoter,of |
R22806 | T29222 | T29221 | cc | and,promoter |
R22807 | T29223 | T29224 | amod | likely,interacts |
R22808 | T29224 | T29214 | conj | interacts,occupies |
R22809 | T29225 | T29224 | prep | with,interacts |
R22810 | T29226 | T29227 | amod | transcriptional,repressors |
R22811 | T29227 | T29225 | pobj | repressors,with |
R22812 | T29228 | T29227 | punct | ",",repressors |
R22813 | T29229 | T29230 | amod | such,as |
R22814 | T29230 | T29227 | prep | as,repressors |
R22815 | T29231 | T29230 | pobj | HDACs,as |
R22816 | T29232 | T29231 | punct | (,HDACs |
R22817 | T29233 | T29231 | appos | 65,HDACs |
R22818 | T29234 | T29231 | punct | ),HDACs |
R22819 | T29235 | T29214 | punct | ",",occupies |
R22820 | T29236 | T29237 | aux | to,inhibit |
R22821 | T29237 | T29214 | advcl | inhibit,occupies |
R22822 | T29238 | T29239 | compound | gene,transcription |
R22823 | T29239 | T29237 | dobj | transcription,inhibit |
R22824 | T29240 | T29214 | punct | .,occupies |
R22825 | T29241 | T29244 | punct | (,Tat |
R22826 | T29242 | T29244 | nmod | B,Tat |
R22827 | T29243 | T29244 | punct | ),Tat |
R22828 | T29244 | T29245 | nsubj | Tat,activates |
R22829 | T29245 | T29245 | ROOT | activates,activates |
R22830 | T29246 | T29248 | det | the,expression |
R22831 | T29247 | T29248 | amod | MIP-1α,expression |
R22832 | T29248 | T29245 | dobj | expression,activates |
R22833 | T29249 | T29245 | prep | by,activates |
R22834 | T29250 | T29249 | pcomp | removing,by |
R22835 | T29251 | T29253 | det | the,repressor |
R22836 | T29252 | T29253 | amod | IκB-α,repressor |
R22837 | T29253 | T29250 | dobj | repressor,removing |
R22838 | T29254 | T29250 | prep | from,removing |
R22839 | T29255 | T29257 | det | the,enhancer |
R22840 | T29256 | T29257 | compound | NF-κB,enhancer |
R22841 | T29257 | T29254 | pobj | enhancer,from |
R22842 | T29258 | T29250 | punct | ",",removing |
R22843 | T29259 | T29249 | cc | and,by |
R22844 | T29260 | T29249 | conj | by,by |
R22845 | T29261 | T29260 | pcomp | increasing,by |
R22846 | T29262 | T29263 | det | the,binding |
R22847 | T29263 | T29261 | dobj | binding,increasing |
R22848 | T29264 | T29263 | prep | of,binding |
R22849 | T29265 | T29267 | nummod | p65,complex |
R22850 | T29266 | T29267 | amod | NF-κB,complex |
R22851 | T29267 | T29264 | pobj | complex,of |
R22852 | T29268 | T29267 | prep | to,complex |
R22853 | T29269 | T29271 | det | the,enhancer |
R22854 | T29270 | T29271 | amod | NF-κB,enhancer |
R22855 | T29271 | T29268 | pobj | enhancer,to |
R22856 | T29272 | T29245 | punct | .,activates |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T29273 | 16-31 | http://purl.obolibrary.org/obo/GO_0006351 | denotes | transcriptional |
T29274 | 163-178 | http://purl.obolibrary.org/obo/GO_0006351 | denotes | transcriptional |
T29275 | 227-240 | http://purl.obolibrary.org/obo/GO_0006351 | denotes | transcription |
GO-MF
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T29277 | 361-368 | http://purl.obolibrary.org/obo/GO_0005488 | denotes | binding |
GO-CC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T29276 | 376-389 | http://purl.obolibrary.org/obo/GO_0071159 | denotes | NF-κB complex |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T29103 | 0-412 | Sentence | denotes | Model of MIP-1α transcriptional activation by HIV-1 Tat. (A) In absence of Tat, IκB-α occupies the NF-κB enhancer of the MIP-1α promoter and likely interacts with transcriptional repressors, such as HDACs (65), to inhibit gene transcription. (B) Tat activates the MIP-1α expression by removing the IκB-α repressor from the NF-κB enhancer, and by increasing the binding of p65 NF-κB complex to the NF-κB enhancer. |
T257 | 0-412 | Sentence | denotes | Model of MIP-1α transcriptional activation by HIV-1 Tat. (A) In absence of Tat, IκB-α occupies the NF-κB enhancer of the MIP-1α promoter and likely interacts with transcriptional repressors, such as HDACs (65), to inhibit gene transcription. (B) Tat activates the MIP-1α expression by removing the IκB-α repressor from the NF-κB enhancer, and by increasing the binding of p65 NF-κB complex to the NF-κB enhancer. |
events-check-again
Id | Subject | Object | Predicate | Lexical cue | Speculation |
---|---|---|---|---|---|
T29372 | 9-15 | Protein | denotes | MIP-1α | |
T29373 | 16-31 | Transcription | denotes | transcriptional | |
T29374 | 32-42 | Positive_regulation | denotes | activation | |
T29375 | 52-55 | Protein | denotes | Tat | |
T29376 | 64-71 | Negative_regulation | denotes | absence | |
T29377 | 75-78 | Protein | denotes | Tat | |
T29378 | 80-85 | Protein | denotes | IκB-α | |
T29379 | 86-94 | Binding | denotes | occupies | |
T29380 | 99-113 | Entity | denotes | NF-κB enhancer | |
T29381 | 121-127 | Protein | denotes | MIP-1α | |
T29382 | 148-157 | Binding | denotes | interacts | true |
T29383 | 246-249 | Protein | denotes | Tat | |
T29384 | 250-259 | Positive_regulation | denotes | activates | |
T29385 | 264-270 | Protein | denotes | MIP-1α | |
T29386 | 271-281 | Gene_expression | denotes | expression | |
T29387 | 285-293 | Negative_regulation | denotes | removing | |
T29388 | 298-303 | Protein | denotes | IκB-α | |
T29389 | 346-356 | Positive_regulation | denotes | increasing | |
T29390 | 361-368 | Binding | denotes | binding | |
T29391 | 397-411 | Entity | denotes | NF-κB enhancer | |
R22929 | T29372 | T29373 | themeOf | MIP-1α,transcriptional | |
R22930 | T29373 | T29374 | themeOf | transcriptional,activation | |
R22931 | T29375 | T29374 | causeOf | Tat,activation | |
R22932 | T29377 | T29376 | themeOf | Tat,absence | |
R22933 | T29378 | T29379 | themeOf | IκB-α,occupies | |
R22934 | T29378 | T29382 | themeOf | IκB-α,interacts | |
R22935 | T29380 | T29379 | themeOf | NF-κB enhancer,occupies | |
R22936 | T29380 | T29381 | partOf | NF-κB enhancer,MIP-1α | |
R22937 | T29383 | T29384 | causeOf | Tat,activates | |
R22938 | T29383 | T29387 | causeOf | Tat,removing | |
R22939 | T29383 | T29389 | causeOf | Tat,increasing | |
R22940 | T29385 | T29386 | themeOf | MIP-1α,expression | |
R22941 | T29386 | T29384 | themeOf | expression,activates | |
R22942 | T29388 | T29387 | themeOf | IκB-α,removing | |
R22943 | T29390 | T29389 | themeOf | binding,increasing | |
R22944 | T29391 | T29390 | themeOf | NF-κB enhancer,binding | |
R22945 | T29391 | T29385 | partOf | NF-κB enhancer,MIP-1α |
bionlp-st-ge-2016-reference-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T29403 | 264-270 | Protein | denotes | MIP-1α |
T29404 | 298-313 | Protein | denotes | IκB-α repressor |
T29405 | 323-337 | Protein | denotes | NF-κB enhancer |
T29406 | 372-375 | Protein | denotes | p65 |
T29392 | 9-15 | Protein | denotes | MIP-1α |
T29393 | 46-55 | Protein | denotes | HIV-1 Tat |
T29394 | 32-42 | Positive_regulation | denotes | activation |
T29395 | 75-78 | Protein | denotes | Tat |
T29396 | 80-85 | Protein | denotes | IκB-α |
T29397 | 99-113 | Protein | denotes | NF-κB enhancer |
T29398 | 121-136 | Protein | denotes | MIP-1α promoter |
T29399 | 64-71 | Negative_regulation | denotes | absence |
T29400 | 86-94 | Positive_regulation | denotes | occupies |
T29401 | 148-157 | Binding | denotes | interacts |
T29402 | 246-249 | Protein | denotes | Tat |
T29407 | 376-381 | Protein | denotes | NF-κB |
T29408 | 397-411 | Protein | denotes | NF-κB enhancer |
T29409 | 271-281 | Gene_expression | denotes | expression |
T29410 | 285-293 | Positive_regulation | denotes | removing |
T29411 | 361-368 | Binding | denotes | binding |
T29412 | 382-389 | Binding | denotes | complex |
T29413 | 250-259 | Positive_regulation | denotes | activates |
T29414 | 346-356 | Positive_regulation | denotes | increasing |
R22946 | T29392 | T29394 | themeOf | MIP-1α,activation |
R22947 | T29395 | T29399 | themeOf | Tat,absence |
R22948 | T29396 | T29400 | causeOf | IκB-α,occupies |
R22949 | T29396 | T29401 | themeOf | IκB-α,interacts |
R22950 | T29397 | T29400 | themeOf | NF-κB enhancer,occupies |
R22951 | T29402 | T29413 | causeOf | Tat,activates |
R22952 | T29403 | T29409 | themeOf | MIP-1α,expression |
R22953 | T29404 | T29410 | themeOf | IκB-α repressor,removing |
R22954 | T29406 | T29412 | themeOf | p65,complex |
R22955 | T29407 | T29412 | themeOf | NF-κB,complex |
R22956 | T29408 | T29411 | themeOf | NF-κB enhancer,binding |
R22957 | T29409 | T29413 | themeOf | expression,activates |
R22958 | T29411 | T29414 | themeOf | binding,increasing |
test2
Id | Subject | Object | Predicate | Lexical cue | Speculation |
---|---|---|---|---|---|
T29064 | 9-15 | Protein | denotes | MIP-1α | |
T29065 | 32-42 | Positive_regulation | denotes | activation | |
T29066 | 52-55 | Protein | denotes | Tat | |
T29067 | 64-71 | Negative_regulation | denotes | absence | |
T29068 | 75-78 | Protein | denotes | Tat | true |
T29069 | 80-85 | Protein | denotes | IκB-α | |
T29070 | 86-94 | Binding | denotes | occupies | |
T29071 | 99-113 | Entity | denotes | NF-κB enhancer | |
T29072 | 121-127 | Protein | denotes | MIP-1α | |
T29073 | 148-157 | Binding | denotes | interacts | |
T29074 | 246-249 | Protein | denotes | Tat | |
T29075 | 250-259 | Positive_regulation | denotes | activates | |
T29076 | 264-270 | Protein | denotes | MIP-1α | |
T29077 | 271-281 | Gene_expression | denotes | expression | |
T29078 | 285-293 | Negative_regulation | denotes | removing | |
T29079 | 298-303 | Protein | denotes | IκB-α | |
T29080 | 346-356 | Positive_regulation | denotes | increasing | |
T29081 | 361-368 | Binding | denotes | binding | |
T29082 | 397-411 | Entity | denotes | NF-κB enhancer | |
R22673 | T29071 | T29072 | partOf | NF-κB enhancer,MIP-1α | |
R22674 | T29071 | T29073 | themeOf | NF-κB enhancer,interacts | |
R22675 | T29071 | T29070 | themeOf | NF-κB enhancer,occupies | |
R22676 | T29074 | T29080 | causeOf | Tat,increasing | |
R22677 | T29074 | T29075 | causeOf | Tat,activates | |
R22678 | T29074 | T29078 | causeOf | Tat,removing | |
R22679 | T29076 | T29077 | themeOf | MIP-1α,expression | |
R22680 | T29077 | T29075 | themeOf | expression,activates | |
R22681 | T29079 | T29078 | themeOf | IκB-α,removing | |
R22682 | T29081 | T29080 | themeOf | binding,increasing | |
R22683 | T29082 | T29081 | themeOf | NF-κB enhancer,binding | |
R22684 | T29082 | T29076 | partOf | NF-κB enhancer,MIP-1α | |
R22685 | T29082 | T29079 | partOf | NF-κB enhancer,IκB-α | |
R22672 | T29069 | T29067 | themeOf | IκB-α,absence | |
R22668 | T29064 | T29065 | themeOf | MIP-1α,activation | |
R22669 | T29066 | T29065 | causeOf | Tat,activation | |
R22670 | T29068 | T29067 | themeOf | Tat,absence | |
R22671 | T29069 | T29070 | themeOf | IκB-α,occupies |
bionlp-st-ge-2016-reference
Id | Subject | Object | Predicate | Lexical cue | Speculation |
---|---|---|---|---|---|
T29102 | 397-411 | Entity | denotes | NF-κB enhancer | |
T29083 | 9-15 | Protein | denotes | MIP-1α | |
T29084 | 16-31 | Transcription | denotes | transcriptional | |
T29085 | 32-42 | Positive_regulation | denotes | activation | |
T29086 | 52-55 | Protein | denotes | Tat | |
T29087 | 64-71 | Negative_regulation | denotes | absence | |
T29088 | 75-78 | Protein | denotes | Tat | |
T29089 | 80-85 | Protein | denotes | IκB-α | |
T29090 | 86-94 | Binding | denotes | occupies | |
T29091 | 99-113 | Entity | denotes | NF-κB enhancer | |
T29092 | 121-127 | Protein | denotes | MIP-1α | |
T29093 | 148-157 | Binding | denotes | interacts | true |
T29094 | 246-249 | Protein | denotes | Tat | |
T29095 | 250-259 | Positive_regulation | denotes | activates | |
T29096 | 264-270 | Protein | denotes | MIP-1α | |
T29097 | 271-281 | Gene_expression | denotes | expression | |
T29098 | 285-293 | Negative_regulation | denotes | removing | |
T29099 | 298-303 | Protein | denotes | IκB-α | |
T29100 | 346-356 | Positive_regulation | denotes | increasing | |
T29101 | 361-368 | Binding | denotes | binding | |
R22692 | T29091 | T29090 | themeOf | NF-κB enhancer,occupies | |
R22693 | T29091 | T29092 | partOf | NF-κB enhancer,MIP-1α | |
R22694 | T29094 | T29095 | causeOf | Tat,activates | |
R22695 | T29094 | T29098 | causeOf | Tat,removing | |
R22696 | T29094 | T29100 | causeOf | Tat,increasing | |
R22697 | T29096 | T29097 | themeOf | MIP-1α,expression | |
R22698 | T29097 | T29095 | themeOf | expression,activates | |
R22699 | T29099 | T29098 | themeOf | IκB-α,removing | |
R22700 | T29101 | T29100 | themeOf | binding,increasing | |
R22701 | T29102 | T29101 | themeOf | NF-κB enhancer,binding | |
R22702 | T29102 | T29096 | partOf | NF-κB enhancer,MIP-1α | |
R22686 | T29083 | T29084 | themeOf | MIP-1α,transcriptional | |
R22687 | T29084 | T29085 | themeOf | transcriptional,activation | |
R22688 | T29086 | T29085 | causeOf | Tat,activation | |
R22689 | T29088 | T29087 | themeOf | Tat,absence | |
R22690 | T29089 | T29090 | themeOf | IκB-α,occupies | |
R22691 | T29089 | T29093 | themeOf | IκB-α,interacts |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T29178 | 9-15 | P10147 | denotes | MIP-1α |
T29179 | 52-55 | P04608 | denotes | Tat |
T29180 | 52-55 | P04605 | denotes | Tat |
T29181 | 52-55 | P04610 | denotes | Tat |
T29182 | 52-55 | Q8UMQ1 | denotes | Tat |
T29183 | 75-78 | P04610 | denotes | Tat |
T29184 | 75-78 | P04608 | denotes | Tat |
T29185 | 75-78 | Q8UMQ1 | denotes | Tat |
T29186 | 75-78 | P04605 | denotes | Tat |
T29187 | 121-127 | P10147 | denotes | MIP-1α |
T29188 | 246-249 | P04605 | denotes | Tat |
T29189 | 246-249 | P04608 | denotes | Tat |
T29190 | 246-249 | Q8UMQ1 | denotes | Tat |
T29191 | 246-249 | P04610 | denotes | Tat |
T29192 | 264-270 | P10147 | denotes | MIP-1α |
T29193 | 372-375 | Q04206 | denotes | p65 |
T29194 | 372-375 | P21579 | denotes | p65 |