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PMC:3333881 / 42963-43205 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T20489 0-2 IN denotes Of
T20490 3-11 NN denotes interest
T20491 11-12 -COMMA- denotes ,
T20492 13-18 NN denotes IκB-α
T20493 19-22 VB denotes was
T20494 23-28 VB denotes found
T20495 29-39 VB denotes associated
T20496 40-42 TO denotes to
T20497 43-46 DT denotes the
T20498 47-52 NN denotes NF-κB
T20499 53-62 NN denotes enhancers
T20500 63-65 IN denotes in
T20501 66-73 NN denotes absence
T20502 74-76 IN denotes of
T20503 77-80 NN denotes Tat
T20504 80-81 -COMMA- denotes ,
T20505 82-87 WRB denotes where
T20506 88-90 PRP denotes it
T20507 91-94 VB denotes was
T20508 95-104 VB denotes displaced
T20509 105-107 IN denotes in
T20510 108-116 NN denotes presence
T20511 117-119 IN denotes of
T20512 120-124 NNP denotes Tat.
T20513 125-130 DT denotes These
T20514 131-138 NN denotes results
T20515 139-146 VB denotes suggest
T20516 147-148 DT denotes a
T20517 149-157 JJ denotes negative
T20518 158-168 JJ denotes regulatory
T20519 169-173 NN denotes role
T20520 174-176 IN denotes of
T20521 177-182 NN denotes IκB-α
T20522 183-185 IN denotes in
T20523 186-190 NN denotes gene
T20524 191-201 NN denotes regulation
T20525 202-209 IN denotes through
T20526 210-219 NN denotes occupancy
T20527 220-222 IN denotes of
T20528 223-231 JJ denotes specific
T20529 232-241 NN denotes promoters
R16450 T20490 T20489 arg2Of interest,Of
R16451 T20492 T20493 arg1Of IκB-α,was
R16452 T20492 T20494 arg2Of IκB-α,found
R16453 T20492 T20495 arg2Of IκB-α,associated
R16454 T20494 T20489 arg1Of found,Of
R16455 T20494 T20491 arg1Of found,","
R16456 T20494 T20493 arg2Of found,was
R16457 T20495 T20494 arg3Of associated,found
R16458 T20495 T20496 arg1Of associated,to
R16459 T20495 T20500 arg1Of associated,in
R16460 T20499 T20496 arg2Of enhancers,to
R16461 T20499 T20497 arg1Of enhancers,the
R16462 T20499 T20498 arg1Of enhancers,NF-κB
R16463 T20500 T20502 arg1Of in,of
R16464 T20501 T20500 arg2Of absence,in
R16465 T20503 T20500 arg3Of Tat,in
R16466 T20503 T20504 arg1Of Tat,","
R16467 T20503 T20505 arg1Of Tat,where
R16468 T20506 T20507 arg1Of it,was
R16469 T20506 T20508 arg2Of it,displaced
R16470 T20508 T20505 arg2Of displaced,where
R16471 T20508 T20507 arg2Of displaced,was
R16472 T20508 T20509 arg1Of displaced,in
R16473 T20510 T20509 arg2Of presence,in
R16474 T20510 T20511 arg1Of presence,of
R16475 T20512 T20511 arg2Of Tat.,of
R16476 T20514 T20513 arg1Of results,These
R16477 T20514 T20515 arg1Of results,suggest
R16478 T20515 T20508 arg3Of suggest,displaced
R16479 T20519 T20515 arg2Of role,suggest
R16480 T20519 T20516 arg1Of role,a
R16481 T20519 T20517 arg1Of role,negative
R16482 T20519 T20518 arg1Of role,regulatory
R16483 T20519 T20520 arg1Of role,of
R16484 T20519 T20522 arg1Of role,in
R16485 T20521 T20520 arg2Of IκB-α,of
R16486 T20524 T20522 arg2Of regulation,in
R16487 T20524 T20523 arg1Of regulation,gene
R16488 T20524 T20525 arg1Of regulation,through
R16489 T20526 T20525 arg2Of occupancy,through
R16490 T20526 T20527 arg1Of occupancy,of
R16491 T20529 T20527 arg2Of promoters,of
R16492 T20529 T20528 arg1Of promoters,specific

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T21842 0-2 IN denotes Of
T21843 3-11 NN denotes interest
T21844 11-12 , denotes ,
T21845 13-18 NNP denotes IκB-α
T21846 19-22 VBD denotes was
T21847 23-28 VBN denotes found
T21848 29-39 VBN denotes associated
T21849 40-42 TO denotes to
T21850 43-46 DT denotes the
T21851 47-52 JJ denotes NF-κB
T21852 53-62 NNS denotes enhancers
T21853 63-65 IN denotes in
T21854 66-73 NN denotes absence
T21855 74-76 IN denotes of
T21856 77-80 NNP denotes Tat
T21857 80-81 , denotes ,
T21858 82-87 WRB denotes where
T21859 88-90 PRP denotes it
T21860 91-94 VBD denotes was
T21861 95-104 VBN denotes displaced
T21862 105-107 IN denotes in
T21863 108-116 NN denotes presence
T21864 117-119 IN denotes of
T21865 120-123 NNP denotes Tat
T21866 123-124 . denotes .
T21867 125-130 DT denotes These
T21868 131-138 NNS denotes results
T21869 139-146 VBP denotes suggest
T21870 147-148 DT denotes a
T21871 149-157 JJ denotes negative
T21872 158-168 JJ denotes regulatory
T21873 169-173 NN denotes role
T21874 174-176 IN denotes of
T21875 177-182 NNP denotes IκB-α
T21876 183-185 IN denotes in
T21877 186-190 NN denotes gene
T21878 191-201 NN denotes regulation
T21879 202-209 IN denotes through
T21880 210-219 NN denotes occupancy
T21881 220-222 IN denotes of
T21882 223-231 JJ denotes specific
T21883 232-241 NNS denotes promoters
T21884 241-242 . denotes .
R17533 T21842 T21847 prep Of,found
R17534 T21843 T21842 pobj interest,Of
R17535 T21844 T21847 punct ",",found
R17536 T21845 T21847 nsubjpass IκB-α,found
R17537 T21846 T21847 auxpass was,found
R17538 T21847 T21847 ROOT found,found
R17539 T21848 T21847 xcomp associated,found
R17540 T21849 T21848 prep to,associated
R17541 T21850 T21852 det the,enhancers
R17542 T21851 T21852 amod NF-κB,enhancers
R17543 T21852 T21849 pobj enhancers,to
R17544 T21853 T21852 prep in,enhancers
R17545 T21854 T21853 pobj absence,in
R17546 T21855 T21854 prep of,absence
R17547 T21856 T21855 pobj Tat,of
R17548 T21857 T21854 punct ",",absence
R17549 T21858 T21861 advmod where,displaced
R17550 T21859 T21861 nsubjpass it,displaced
R17551 T21860 T21861 auxpass was,displaced
R17552 T21861 T21852 relcl displaced,enhancers
R17553 T21862 T21861 prep in,displaced
R17554 T21863 T21862 pobj presence,in
R17555 T21864 T21863 prep of,presence
R17556 T21865 T21864 pobj Tat,of
R17557 T21866 T21847 punct .,found
R17558 T21867 T21868 det These,results
R17559 T21868 T21869 nsubj results,suggest
R17560 T21869 T21869 ROOT suggest,suggest
R17561 T21870 T21873 det a,role
R17562 T21871 T21873 amod negative,role
R17563 T21872 T21873 amod regulatory,role
R17564 T21873 T21869 dobj role,suggest
R17565 T21874 T21873 prep of,role
R17566 T21875 T21874 pobj IκB-α,of
R17567 T21876 T21873 prep in,role
R17568 T21877 T21878 compound gene,regulation
R17569 T21878 T21876 pobj regulation,in
R17570 T21879 T21869 prep through,suggest
R17571 T21880 T21879 pobj occupancy,through
R17572 T21881 T21880 prep of,occupancy
R17573 T21882 T21883 amod specific,promoters
R17574 T21883 T21881 pobj promoters,of
R17575 T21884 T21869 punct .,suggest

GO-BP

Id Subject Object Predicate Lexical cue
T22348 191-201 http://purl.obolibrary.org/obo/GO_0065007 denotes regulation

sentences

Id Subject Object Predicate Lexical cue
T19898 0-242 Sentence denotes Of interest, IκB-α was found associated to the NF-κB enhancers in absence of Tat, where it was displaced in presence of Tat. These results suggest a negative regulatory role of IκB-α in gene regulation through occupancy of specific promoters.
T252 0-124 Sentence denotes Of interest, IκB-α was found associated to the NF-κB enhancers in absence of Tat, where it was displaced in presence of Tat.
T253 125-242 Sentence denotes These results suggest a negative regulatory role of IκB-α in gene regulation through occupancy of specific promoters.

events-check-again

Id Subject Object Predicate Lexical cue Negation
T23517 13-18 Protein denotes IκB-α
T23518 23-28 Negative_regulation denotes found true
T23519 29-39 Binding denotes associated
T23520 66-73 Negative_regulation denotes absence
T23521 77-80 Protein denotes Tat
T23522 120-123 Protein denotes Tat
T23523 177-182 Protein denotes IκB-α
T23524 210-219 Binding denotes occupancy
R18832 T23517 T23519 themeOf IκB-α,associated
R18834 T23519 T23518 themeOf associated,found
R18835 T23520 T23518 causeOf absence,found
R18836 T23521 T23520 themeOf Tat,absence
R18838 T23523 T23524 themeOf IκB-α,occupancy

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T23779 13-18 Protein denotes IκB-α
T23780 47-62 Protein denotes NF-κB enhancers
T23781 77-80 Protein denotes Tat
T23782 120-123 Protein denotes Tat
T23783 29-39 Binding denotes associated
T23784 108-116 Binding denotes presence
T23785 177-182 Protein denotes IκB-α
R19024 T23779 T23783 themeOf IκB-α,associated
R19029 T23781 T23783 themeOf Tat,associated
R19030 T23782 T23784 themeOf Tat,presence

test2

Id Subject Object Predicate Lexical cue
T19591 13-18 Protein denotes IκB-α
T19592 29-39 Binding denotes associated
T19593 66-73 Negative_regulation denotes absence
T19594 77-80 Protein denotes Tat
T19595 120-123 Protein denotes Tat
T19596 177-182 Protein denotes IκB-α
T19597 210-219 Binding denotes occupancy
R15651 T19591 T19592 themeOf IκB-α,associated
R15652 T19594 T19593 themeOf Tat,absence
R15653 T19596 T19597 themeOf IκB-α,occupancy

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue Negation
T19791 13-18 Protein denotes IκB-α
T19792 23-28 Negative_regulation denotes found true
T19793 29-39 Binding denotes associated
T19794 66-73 Negative_regulation denotes absence
T19795 77-80 Protein denotes Tat
T19796 120-123 Protein denotes Tat
T19797 177-182 Protein denotes IκB-α
T19798 210-219 Binding denotes occupancy
R15793 T19791 T19793 themeOf IκB-α,associated
R15794 T19793 T19792 themeOf associated,found
R15795 T19794 T19792 causeOf absence,found
R15796 T19795 T19794 themeOf Tat,absence
R15797 T19797 T19798 themeOf IκB-α,occupancy

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T21116 77-80 P04608 denotes Tat
T21117 77-80 P04605 denotes Tat
T21118 77-80 Q8UMQ1 denotes Tat
T21119 77-80 P04610 denotes Tat
T21120 120-123 P04608 denotes Tat
T21121 120-123 P04610 denotes Tat
T21122 120-123 Q8UMQ1 denotes Tat
T21123 120-123 P04605 denotes Tat