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PMC:3333881 / 42963-43087 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T20489 0-2 IN denotes Of
T20490 3-11 NN denotes interest
T20491 11-12 -COMMA- denotes ,
T20492 13-18 NN denotes IκB-α
T20493 19-22 VB denotes was
T20494 23-28 VB denotes found
T20495 29-39 VB denotes associated
T20496 40-42 TO denotes to
T20497 43-46 DT denotes the
T20498 47-52 NN denotes NF-κB
T20499 53-62 NN denotes enhancers
T20500 63-65 IN denotes in
T20501 66-73 NN denotes absence
T20502 74-76 IN denotes of
T20503 77-80 NN denotes Tat
T20504 80-81 -COMMA- denotes ,
T20505 82-87 WRB denotes where
T20506 88-90 PRP denotes it
T20507 91-94 VB denotes was
T20508 95-104 VB denotes displaced
T20509 105-107 IN denotes in
T20510 108-116 NN denotes presence
T20511 117-119 IN denotes of
T20512 120-124 NNP denotes Tat.
R16450 T20490 T20489 arg2Of interest,Of
R16451 T20492 T20493 arg1Of IκB-α,was
R16452 T20492 T20494 arg2Of IκB-α,found
R16453 T20492 T20495 arg2Of IκB-α,associated
R16454 T20494 T20489 arg1Of found,Of
R16455 T20494 T20491 arg1Of found,","
R16456 T20494 T20493 arg2Of found,was
R16457 T20495 T20494 arg3Of associated,found
R16458 T20495 T20496 arg1Of associated,to
R16459 T20495 T20500 arg1Of associated,in
R16460 T20499 T20496 arg2Of enhancers,to
R16461 T20499 T20497 arg1Of enhancers,the
R16462 T20499 T20498 arg1Of enhancers,NF-κB
R16463 T20500 T20502 arg1Of in,of
R16464 T20501 T20500 arg2Of absence,in
R16465 T20503 T20500 arg3Of Tat,in
R16466 T20503 T20504 arg1Of Tat,","
R16467 T20503 T20505 arg1Of Tat,where
R16468 T20506 T20507 arg1Of it,was
R16469 T20506 T20508 arg2Of it,displaced
R16470 T20508 T20505 arg2Of displaced,where
R16471 T20508 T20507 arg2Of displaced,was
R16472 T20508 T20509 arg1Of displaced,in
R16473 T20510 T20509 arg2Of presence,in
R16474 T20510 T20511 arg1Of presence,of
R16475 T20512 T20511 arg2Of Tat.,of

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T21842 0-2 IN denotes Of
T21843 3-11 NN denotes interest
T21844 11-12 , denotes ,
T21845 13-18 NNP denotes IκB-α
T21846 19-22 VBD denotes was
T21847 23-28 VBN denotes found
T21848 29-39 VBN denotes associated
T21849 40-42 TO denotes to
T21850 43-46 DT denotes the
T21851 47-52 JJ denotes NF-κB
T21852 53-62 NNS denotes enhancers
T21853 63-65 IN denotes in
T21854 66-73 NN denotes absence
T21855 74-76 IN denotes of
T21856 77-80 NNP denotes Tat
T21857 80-81 , denotes ,
T21858 82-87 WRB denotes where
T21859 88-90 PRP denotes it
T21860 91-94 VBD denotes was
T21861 95-104 VBN denotes displaced
T21862 105-107 IN denotes in
T21863 108-116 NN denotes presence
T21864 117-119 IN denotes of
T21865 120-123 NNP denotes Tat
T21866 123-124 . denotes .
R17533 T21842 T21847 prep Of,found
R17534 T21843 T21842 pobj interest,Of
R17535 T21844 T21847 punct ",",found
R17536 T21845 T21847 nsubjpass IκB-α,found
R17537 T21846 T21847 auxpass was,found
R17538 T21847 T21847 ROOT found,found
R17539 T21848 T21847 xcomp associated,found
R17540 T21849 T21848 prep to,associated
R17541 T21850 T21852 det the,enhancers
R17542 T21851 T21852 amod NF-κB,enhancers
R17543 T21852 T21849 pobj enhancers,to
R17544 T21853 T21852 prep in,enhancers
R17545 T21854 T21853 pobj absence,in
R17546 T21855 T21854 prep of,absence
R17547 T21856 T21855 pobj Tat,of
R17548 T21857 T21854 punct ",",absence
R17549 T21858 T21861 advmod where,displaced
R17550 T21859 T21861 nsubjpass it,displaced
R17551 T21860 T21861 auxpass was,displaced
R17552 T21861 T21852 relcl displaced,enhancers
R17553 T21862 T21861 prep in,displaced
R17554 T21863 T21862 pobj presence,in
R17555 T21864 T21863 prep of,presence
R17556 T21865 T21864 pobj Tat,of
R17557 T21866 T21847 punct .,found

sentences

Id Subject Object Predicate Lexical cue
T252 0-124 Sentence denotes Of interest, IκB-α was found associated to the NF-κB enhancers in absence of Tat, where it was displaced in presence of Tat.

events-check-again

Id Subject Object Predicate Lexical cue Negation
T23517 13-18 Protein denotes IκB-α
T23518 23-28 Negative_regulation denotes found true
T23519 29-39 Binding denotes associated
T23520 66-73 Negative_regulation denotes absence
T23521 77-80 Protein denotes Tat
T23522 120-123 Protein denotes Tat
R18832 T23517 T23519 themeOf IκB-α,associated
R18834 T23519 T23518 themeOf associated,found
R18835 T23520 T23518 causeOf absence,found
R18836 T23521 T23520 themeOf Tat,absence

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T23779 13-18 Protein denotes IκB-α
T23780 47-62 Protein denotes NF-κB enhancers
T23781 77-80 Protein denotes Tat
T23782 120-123 Protein denotes Tat
T23783 29-39 Binding denotes associated
T23784 108-116 Binding denotes presence
R19024 T23779 T23783 themeOf IκB-α,associated
R19029 T23781 T23783 themeOf Tat,associated
R19030 T23782 T23784 themeOf Tat,presence

test2

Id Subject Object Predicate Lexical cue
T19591 13-18 Protein denotes IκB-α
T19592 29-39 Binding denotes associated
T19593 66-73 Negative_regulation denotes absence
T19594 77-80 Protein denotes Tat
T19595 120-123 Protein denotes Tat
R15651 T19591 T19592 themeOf IκB-α,associated
R15652 T19594 T19593 themeOf Tat,absence

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue Negation
T19791 13-18 Protein denotes IκB-α
T19792 23-28 Negative_regulation denotes found true
T19793 29-39 Binding denotes associated
T19794 66-73 Negative_regulation denotes absence
T19795 77-80 Protein denotes Tat
T19796 120-123 Protein denotes Tat
R15793 T19791 T19793 themeOf IκB-α,associated
R15794 T19793 T19792 themeOf associated,found
R15795 T19794 T19792 causeOf absence,found
R15796 T19795 T19794 themeOf Tat,absence

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T21116 77-80 P04608 denotes Tat
T21117 77-80 P04605 denotes Tat
T21118 77-80 Q8UMQ1 denotes Tat
T21119 77-80 P04610 denotes Tat
T21120 120-123 P04608 denotes Tat
T21121 120-123 P04610 denotes Tat
T21122 120-123 Q8UMQ1 denotes Tat
T21123 120-123 P04605 denotes Tat