PMC:3333881 / 42963-43087
Annnotations
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T20489 | 0-2 | IN | denotes | Of |
T20490 | 3-11 | NN | denotes | interest |
T20491 | 11-12 | -COMMA- | denotes | , |
T20492 | 13-18 | NN | denotes | IκB-α |
T20493 | 19-22 | VB | denotes | was |
T20494 | 23-28 | VB | denotes | found |
T20495 | 29-39 | VB | denotes | associated |
T20496 | 40-42 | TO | denotes | to |
T20497 | 43-46 | DT | denotes | the |
T20498 | 47-52 | NN | denotes | NF-κB |
T20499 | 53-62 | NN | denotes | enhancers |
T20500 | 63-65 | IN | denotes | in |
T20501 | 66-73 | NN | denotes | absence |
T20502 | 74-76 | IN | denotes | of |
T20503 | 77-80 | NN | denotes | Tat |
T20504 | 80-81 | -COMMA- | denotes | , |
T20505 | 82-87 | WRB | denotes | where |
T20506 | 88-90 | PRP | denotes | it |
T20507 | 91-94 | VB | denotes | was |
T20508 | 95-104 | VB | denotes | displaced |
T20509 | 105-107 | IN | denotes | in |
T20510 | 108-116 | NN | denotes | presence |
T20511 | 117-119 | IN | denotes | of |
T20512 | 120-124 | NNP | denotes | Tat. |
R16450 | T20490 | T20489 | arg2Of | interest,Of |
R16451 | T20492 | T20493 | arg1Of | IκB-α,was |
R16452 | T20492 | T20494 | arg2Of | IκB-α,found |
R16453 | T20492 | T20495 | arg2Of | IκB-α,associated |
R16454 | T20494 | T20489 | arg1Of | found,Of |
R16455 | T20494 | T20491 | arg1Of | found,"," |
R16456 | T20494 | T20493 | arg2Of | found,was |
R16457 | T20495 | T20494 | arg3Of | associated,found |
R16458 | T20495 | T20496 | arg1Of | associated,to |
R16459 | T20495 | T20500 | arg1Of | associated,in |
R16460 | T20499 | T20496 | arg2Of | enhancers,to |
R16461 | T20499 | T20497 | arg1Of | enhancers,the |
R16462 | T20499 | T20498 | arg1Of | enhancers,NF-κB |
R16463 | T20500 | T20502 | arg1Of | in,of |
R16464 | T20501 | T20500 | arg2Of | absence,in |
R16465 | T20503 | T20500 | arg3Of | Tat,in |
R16466 | T20503 | T20504 | arg1Of | Tat,"," |
R16467 | T20503 | T20505 | arg1Of | Tat,where |
R16468 | T20506 | T20507 | arg1Of | it,was |
R16469 | T20506 | T20508 | arg2Of | it,displaced |
R16470 | T20508 | T20505 | arg2Of | displaced,where |
R16471 | T20508 | T20507 | arg2Of | displaced,was |
R16472 | T20508 | T20509 | arg1Of | displaced,in |
R16473 | T20510 | T20509 | arg2Of | presence,in |
R16474 | T20510 | T20511 | arg1Of | presence,of |
R16475 | T20512 | T20511 | arg2Of | Tat.,of |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T21842 | 0-2 | IN | denotes | Of |
T21843 | 3-11 | NN | denotes | interest |
T21844 | 11-12 | , | denotes | , |
T21845 | 13-18 | NNP | denotes | IκB-α |
T21846 | 19-22 | VBD | denotes | was |
T21847 | 23-28 | VBN | denotes | found |
T21848 | 29-39 | VBN | denotes | associated |
T21849 | 40-42 | TO | denotes | to |
T21850 | 43-46 | DT | denotes | the |
T21851 | 47-52 | JJ | denotes | NF-κB |
T21852 | 53-62 | NNS | denotes | enhancers |
T21853 | 63-65 | IN | denotes | in |
T21854 | 66-73 | NN | denotes | absence |
T21855 | 74-76 | IN | denotes | of |
T21856 | 77-80 | NNP | denotes | Tat |
T21857 | 80-81 | , | denotes | , |
T21858 | 82-87 | WRB | denotes | where |
T21859 | 88-90 | PRP | denotes | it |
T21860 | 91-94 | VBD | denotes | was |
T21861 | 95-104 | VBN | denotes | displaced |
T21862 | 105-107 | IN | denotes | in |
T21863 | 108-116 | NN | denotes | presence |
T21864 | 117-119 | IN | denotes | of |
T21865 | 120-123 | NNP | denotes | Tat |
T21866 | 123-124 | . | denotes | . |
R17533 | T21842 | T21847 | prep | Of,found |
R17534 | T21843 | T21842 | pobj | interest,Of |
R17535 | T21844 | T21847 | punct | ",",found |
R17536 | T21845 | T21847 | nsubjpass | IκB-α,found |
R17537 | T21846 | T21847 | auxpass | was,found |
R17538 | T21847 | T21847 | ROOT | found,found |
R17539 | T21848 | T21847 | xcomp | associated,found |
R17540 | T21849 | T21848 | prep | to,associated |
R17541 | T21850 | T21852 | det | the,enhancers |
R17542 | T21851 | T21852 | amod | NF-κB,enhancers |
R17543 | T21852 | T21849 | pobj | enhancers,to |
R17544 | T21853 | T21852 | prep | in,enhancers |
R17545 | T21854 | T21853 | pobj | absence,in |
R17546 | T21855 | T21854 | prep | of,absence |
R17547 | T21856 | T21855 | pobj | Tat,of |
R17548 | T21857 | T21854 | punct | ",",absence |
R17549 | T21858 | T21861 | advmod | where,displaced |
R17550 | T21859 | T21861 | nsubjpass | it,displaced |
R17551 | T21860 | T21861 | auxpass | was,displaced |
R17552 | T21861 | T21852 | relcl | displaced,enhancers |
R17553 | T21862 | T21861 | prep | in,displaced |
R17554 | T21863 | T21862 | pobj | presence,in |
R17555 | T21864 | T21863 | prep | of,presence |
R17556 | T21865 | T21864 | pobj | Tat,of |
R17557 | T21866 | T21847 | punct | .,found |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T252 | 0-124 | Sentence | denotes | Of interest, IκB-α was found associated to the NF-κB enhancers in absence of Tat, where it was displaced in presence of Tat. |
events-check-again
Id | Subject | Object | Predicate | Lexical cue | Negation |
---|---|---|---|---|---|
T23517 | 13-18 | Protein | denotes | IκB-α | |
T23518 | 23-28 | Negative_regulation | denotes | found | true |
T23519 | 29-39 | Binding | denotes | associated | |
T23520 | 66-73 | Negative_regulation | denotes | absence | |
T23521 | 77-80 | Protein | denotes | Tat | |
T23522 | 120-123 | Protein | denotes | Tat | |
R18832 | T23517 | T23519 | themeOf | IκB-α,associated | |
R18834 | T23519 | T23518 | themeOf | associated,found | |
R18835 | T23520 | T23518 | causeOf | absence,found | |
R18836 | T23521 | T23520 | themeOf | Tat,absence |
bionlp-st-ge-2016-reference-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T23779 | 13-18 | Protein | denotes | IκB-α |
T23780 | 47-62 | Protein | denotes | NF-κB enhancers |
T23781 | 77-80 | Protein | denotes | Tat |
T23782 | 120-123 | Protein | denotes | Tat |
T23783 | 29-39 | Binding | denotes | associated |
T23784 | 108-116 | Binding | denotes | presence |
R19024 | T23779 | T23783 | themeOf | IκB-α,associated |
R19029 | T23781 | T23783 | themeOf | Tat,associated |
R19030 | T23782 | T23784 | themeOf | Tat,presence |
test2
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T19591 | 13-18 | Protein | denotes | IκB-α |
T19592 | 29-39 | Binding | denotes | associated |
T19593 | 66-73 | Negative_regulation | denotes | absence |
T19594 | 77-80 | Protein | denotes | Tat |
T19595 | 120-123 | Protein | denotes | Tat |
R15651 | T19591 | T19592 | themeOf | IκB-α,associated |
R15652 | T19594 | T19593 | themeOf | Tat,absence |
bionlp-st-ge-2016-reference
Id | Subject | Object | Predicate | Lexical cue | Negation |
---|---|---|---|---|---|
T19791 | 13-18 | Protein | denotes | IκB-α | |
T19792 | 23-28 | Negative_regulation | denotes | found | true |
T19793 | 29-39 | Binding | denotes | associated | |
T19794 | 66-73 | Negative_regulation | denotes | absence | |
T19795 | 77-80 | Protein | denotes | Tat | |
T19796 | 120-123 | Protein | denotes | Tat | |
R15793 | T19791 | T19793 | themeOf | IκB-α,associated | |
R15794 | T19793 | T19792 | themeOf | associated,found | |
R15795 | T19794 | T19792 | causeOf | absence,found | |
R15796 | T19795 | T19794 | themeOf | Tat,absence |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T21116 | 77-80 | P04608 | denotes | Tat |
T21117 | 77-80 | P04605 | denotes | Tat |
T21118 | 77-80 | Q8UMQ1 | denotes | Tat |
T21119 | 77-80 | P04610 | denotes | Tat |
T21120 | 120-123 | P04608 | denotes | Tat |
T21121 | 120-123 | P04610 | denotes | Tat |
T21122 | 120-123 | Q8UMQ1 | denotes | Tat |
T21123 | 120-123 | P04605 | denotes | Tat |