> top > docs > PMC:3333881 > spans > 18750-18942 > annotations

PMC:3333881 / 18750-18942 JSONTXT

Annnotations TAB JSON ListView MergeView

2_test

Id Subject Object Predicate Lexical cue
22187158-12424381-77584445 185-187 12424381 denotes 17
22187158-15499023-77584446 188-190 15499023 denotes 18

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T8982 0-2 TO denotes To
T8983 3-7 DT denotes this
T8984 8-11 NN denotes end
T8985 11-12 -COMMA- denotes ,
T8986 13-17 NN denotes HeLa
T8987 18-23 NN denotes cells
T8988 24-28 VB denotes were
T8989 29-40 VB denotes transfected
T8990 41-45 IN denotes with
T8991 46-58 NN denotes p3x-FLAG-Tat
T8992 58-59 -COMMA- denotes ,
T8993 60-62 CC denotes or
T8994 63-68 JJ denotes empty
T8995 69-75 NN denotes vector
T8996 75-76 -COMMA- denotes ,
T8997 77-87 VB denotes stimulated
T8998 88-92 IN denotes with
T8999 93-96 NN denotes PMA
T9000 97-100 IN denotes for
T9001 101-106 NN denotes 5 min
T9002 106-107 -COMMA- denotes ,
T9003 108-111 CC denotes and
T9004 112-123 RB denotes extensively
T9005 124-130 VB denotes washed
T9006 131-133 TO denotes to
T9007 134-139 VB denotes avoid
T9008 140-143 DT denotes the
T9009 144-155 JJ denotes oscillatory
T9010 156-163 NN denotes kinetic
T9011 164-166 IN denotes of
T9012 167-172 NN denotes NF-κB
T9013 173-183 NN denotes activation
T9014 184-185 -LRB- denotes (
T9015 185-190 CD denotes 17,18
T9016 190-191 -RRB- denotes )
R7484 T8984 T8982 arg2Of end,To
R7485 T8984 T8983 arg1Of end,this
R7486 T8987 T8986 arg1Of cells,HeLa
R7487 T8987 T8988 arg1Of cells,were
R7488 T8987 T8989 arg2Of cells,transfected
R7489 T8989 T8982 arg1Of transfected,To
R7490 T8989 T8985 arg1Of transfected,","
R7491 T8989 T8988 arg2Of transfected,were
R7492 T8989 T8990 arg1Of transfected,with
R7493 T8991 T8993 arg1Of p3x-FLAG-Tat,or
R7494 T8993 T8990 arg2Of or,with
R7495 T8993 T8992 arg1Of or,","
R7496 T8993 T8996 arg1Of or,","
R7497 T8993 T8997 arg2Of or,stimulated
R7498 T8993 T9005 arg2Of or,washed
R7499 T8993 T9007 arg1Of or,avoid
R7500 T8995 T8993 arg2Of vector,or
R7501 T8995 T8994 arg1Of vector,empty
R7502 T8997 T8998 arg1Of stimulated,with
R7503 T8997 T9003 arg1Of stimulated,and
R7504 T8999 T8998 arg2Of PMA,with
R7505 T8999 T9000 arg1Of PMA,for
R7506 T9001 T9000 arg2Of 5 min,for
R7507 T9003 T9002 arg1Of and,","
R7508 T9005 T9003 arg2Of washed,and
R7509 T9005 T9004 arg1Of washed,extensively
R7510 T9007 T9005 arg3Of avoid,washed
R7511 T9007 T9006 arg1Of avoid,to
R7512 T9010 T9007 arg2Of kinetic,avoid
R7513 T9010 T9008 arg1Of kinetic,the
R7514 T9010 T9009 arg1Of kinetic,oscillatory
R7515 T9010 T9011 arg1Of kinetic,of
R7516 T9013 T9011 arg2Of activation,of
R7517 T9013 T9012 arg1Of activation,NF-κB
R7518 T9013 T9014 arg1Of activation,(
R7519 T9015 T9014 arg2Of "17,18",(
R7520 T9016 T9014 arg3Of ),(

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T9983 0-2 TO denotes To
T9984 3-7 DT denotes this
T9985 8-11 NN denotes end
T9986 11-12 , denotes ,
T9987 13-17 NNP denotes HeLa
T9988 18-23 NNS denotes cells
T9989 24-28 VBD denotes were
T9990 29-40 VBN denotes transfected
T9991 41-45 IN denotes with
T9992 46-58 NN denotes p3x-FLAG-Tat
T9993 58-59 , denotes ,
T9994 60-62 CC denotes or
T9995 63-68 JJ denotes empty
T9996 69-75 NN denotes vector
T9997 75-76 , denotes ,
T9998 77-87 VBN denotes stimulated
T9999 88-92 IN denotes with
T10000 93-96 NNP denotes PMA
T10001 97-100 IN denotes for
T10002 101-102 CD denotes 5
T10003 103-106 NN denotes min
T10004 106-107 , denotes ,
T10005 108-111 CC denotes and
T10006 112-123 RB denotes extensively
T10007 124-130 VBD denotes washed
T10008 131-133 TO denotes to
T10009 134-139 VB denotes avoid
T10010 140-143 DT denotes the
T10011 144-155 JJ denotes oscillatory
T10012 156-163 NN denotes kinetic
T10013 164-166 IN denotes of
T10014 167-172 JJ denotes NF-κB
T10015 173-183 NN denotes activation
T10016 184-185 -LRB- denotes (
T10017 185-190 CD denotes 17,18
T10018 190-191 -RRB- denotes )
T10019 191-192 . denotes .
R8323 T9983 T9990 prep To,transfected
R8324 T9984 T9985 det this,end
R8325 T9985 T9983 pobj end,To
R8326 T9986 T9990 punct ",",transfected
R8327 T9987 T9988 compound HeLa,cells
R8328 T9988 T9990 nsubjpass cells,transfected
R8329 T9989 T9990 auxpass were,transfected
R8330 T9990 T9990 ROOT transfected,transfected
R8331 T9991 T9990 prep with,transfected
R8332 T9992 T9991 pobj p3x-FLAG-Tat,with
R8333 T9993 T9992 punct ",",p3x-FLAG-Tat
R8334 T9994 T9992 cc or,p3x-FLAG-Tat
R8335 T9995 T9996 amod empty,vector
R8336 T9996 T9992 conj vector,p3x-FLAG-Tat
R8337 T9997 T9990 punct ",",transfected
R8338 T9998 T9990 dep stimulated,transfected
R8339 T9999 T9998 prep with,stimulated
R8340 T10000 T9999 pobj PMA,with
R8341 T10001 T9998 prep for,stimulated
R8342 T10002 T10003 nummod 5,min
R8343 T10003 T10001 pobj min,for
R8344 T10004 T9998 punct ",",stimulated
R8345 T10005 T9990 cc and,transfected
R8346 T10006 T10007 advmod extensively,washed
R8347 T10007 T9990 conj washed,transfected
R8348 T10008 T10009 aux to,avoid
R8349 T10009 T10007 xcomp avoid,washed
R8350 T10010 T10012 det the,kinetic
R8351 T10011 T10012 amod oscillatory,kinetic
R8352 T10012 T10009 dobj kinetic,avoid
R8353 T10013 T10012 prep of,kinetic
R8354 T10014 T10015 amod NF-κB,activation
R8355 T10015 T10013 pobj activation,of
R8356 T10016 T10015 punct (,activation
R8357 T10017 T10015 appos "17,18",activation
R8358 T10018 T10015 punct ),activation
R8359 T10019 T9990 punct .,transfected

UBERON-AE

Id Subject Object Predicate Lexical cue
T8411 112-123 http://purl.obolibrary.org/obo/UBERON_2000106 denotes extensively

GO-BP

Id Subject Object Predicate Lexical cue
T10409 167-183 http://purl.obolibrary.org/obo/GO_0051092 denotes NF-κB activation

GO-CC

Id Subject Object Predicate Lexical cue
T10442 18-23 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T8544 0-192 Sentence denotes To this end, HeLa cells were transfected with p3x-FLAG-Tat, or empty vector, stimulated with PMA for 5 min, and extensively washed to avoid the oscillatory kinetic of NF-κB activation (17,18).
T123 0-192 Sentence denotes To this end, HeLa cells were transfected with p3x-FLAG-Tat, or empty vector, stimulated with PMA for 5 min, and extensively washed to avoid the oscillatory kinetic of NF-κB activation (17,18).

events-check-again

Id Subject Object Predicate Lexical cue
T11113 55-58 Protein denotes Tat

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T11253 46-49 Protein denotes p3x
T11254 50-54 Protein denotes FLAG
T11255 55-58 Protein denotes Tat
T11256 167-172 Protein denotes NF-κB
T11257 173-183 Positive_regulation denotes activation
R9175 T11256 T11257 themeOf NF-κB,activation

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T8468 55-58 Protein denotes Tat

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T9456 55-58 P04608 denotes Tat
T9457 55-58 Q8UMQ1 denotes Tat
T9458 55-58 P04610 denotes Tat
T9459 55-58 P04605 denotes Tat