PMC:3333881 / 0-111
Annnotations
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T142 | 0-5 | JJ | denotes | Human |
T143 | 6-22 | NN | denotes | immunodeficiency |
T144 | 23-30 | NN | denotes | virus-1 |
T145 | 31-34 | NN | denotes | Tat |
T146 | 35-44 | VB | denotes | activates |
T147 | 45-50 | NN | denotes | NF-κB |
T148 | 51-54 | IN | denotes | via |
T149 | 55-63 | JJ | denotes | physical |
T150 | 64-75 | NN | denotes | interaction |
T151 | 76-80 | IN | denotes | with |
T152 | 81-86 | NN | denotes | IκB-α |
T153 | 87-90 | CC | denotes | and |
T154 | 91-94 | NN | denotes | p65 |
R74 | T145 | T142 | arg1Of | Tat,Human |
R75 | T145 | T143 | arg1Of | Tat,immunodeficiency |
R76 | T145 | T144 | arg1Of | Tat,virus-1 |
R77 | T145 | T146 | arg1Of | Tat,activates |
R78 | T146 | T148 | arg1Of | activates,via |
R79 | T147 | T146 | arg2Of | NF-κB,activates |
R80 | T150 | T148 | arg2Of | interaction,via |
R81 | T150 | T149 | arg1Of | interaction,physical |
R82 | T150 | T151 | arg1Of | interaction,with |
R83 | T152 | T153 | arg1Of | IκB-α,and |
R84 | T153 | T151 | arg2Of | and,with |
R85 | T154 | T153 | arg2Of | p65,and |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T402 | 0-5 | JJ | denotes | Human |
T403 | 6-22 | NN | denotes | immunodeficiency |
T404 | 23-30 | JJ | denotes | virus-1 |
T405 | 31-34 | NNP | denotes | Tat |
T406 | 35-44 | VBZ | denotes | activates |
T407 | 45-50 | NNP | denotes | NF-κB |
T408 | 51-54 | IN | denotes | via |
T409 | 55-63 | JJ | denotes | physical |
T410 | 64-75 | NN | denotes | interaction |
T411 | 76-80 | IN | denotes | with |
T412 | 81-86 | NNP | denotes | IκB-α |
T413 | 87-90 | CC | denotes | and |
T414 | 91-94 | CD | denotes | p65 |
R293 | T402 | T403 | amod | Human,immunodeficiency |
R294 | T403 | T405 | compound | immunodeficiency,Tat |
R295 | T404 | T405 | compound | virus-1,Tat |
R296 | T405 | T406 | nsubj | Tat,activates |
R298 | T407 | T406 | dobj | NF-κB,activates |
R299 | T408 | T406 | prep | via,activates |
R300 | T409 | T410 | amod | physical,interaction |
R301 | T410 | T408 | pobj | interaction,via |
R302 | T411 | T410 | prep | with,interaction |
R303 | T412 | T411 | pobj | IκB-α,with |
R304 | T413 | T412 | cc | and,IκB-α |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T633 | 35-50 | http://purl.obolibrary.org/obo/GO_0051092 | denotes | activates NF-κB |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T89 | 0-94 | Sentence | denotes | Human immunodeficiency virus-1 Tat activates NF-κB via physical interaction with IκB-α and p65 |
T1 | 0-94 | Sentence | denotes | Human immunodeficiency virus-1 Tat activates NF-κB via physical interaction with IκB-α and p65 |
T2 | 97-105 | Sentence | denotes | Abstract |
ICD10
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T638 | 6-22 | http://purl.bioontology.org/ontology/ICD10/D84.9 | denotes | immunodeficiency |
events-check-again
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T858 | 31-34 | Protein | denotes | Tat |
T859 | 64-75 | Binding | denotes | interaction |
T860 | 81-86 | Protein | denotes | IκB-α |
T861 | 91-94 | Protein | denotes | p65 |
R741 | T858 | T859 | themeOf | Tat,interaction |
R742 | T860 | T859 | themeOf | IκB-α,interaction |
bionlp-st-ge-2016-reference-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T903 | 31-34 | Protein | denotes | Tat |
T904 | 45-50 | Protein | denotes | NF-κB |
T905 | 81-86 | Protein | denotes | IκB-α |
T906 | 35-44 | Positive_regulation | denotes | activates |
T907 | 64-75 | Binding | denotes | interaction |
T908 | 35-44 | Positive_regulation | denotes | activates |
R631 | T903 | T906 | causeOf | Tat,activates |
R632 | T903 | T908 | causeOf | Tat,activates |
R633 | T904 | T906 | themeOf | NF-κB,activates |
R634 | T905 | T907 | themeOf | IκB-α,interaction |
R635 | T907 | T908 | themeOf | interaction,activates |
test2
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T46 | 31-34 | Protein | denotes | Tat |
T47 | 64-75 | Binding | denotes | interaction |
T48 | 81-86 | Protein | denotes | IκB-α |
T49 | 91-94 | Protein | denotes | p65 |
R654 | T46 | T47 | themeOf | Tat,interaction |
R655 | T48 | T47 | themeOf | IκB-α,interaction |
bionlp-st-ge-2016-reference
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T97 | 64-75 | Binding | denotes | interaction |
T117 | 31-34 | Protein | denotes | Tat |
T127 | 81-86 | Protein | denotes | IκB-α |
T133 | 91-94 | Protein | denotes | p65 |
R51 | T117 | T97 | themeOf | Tat,interaction |
R61 | T127 | T97 | themeOf | IκB-α,interaction |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T358 | 31-34 | P04608 | denotes | Tat |
T359 | 31-34 | P04605 | denotes | Tat |
T360 | 31-34 | P04610 | denotes | Tat |
T361 | 31-34 | Q8UMQ1 | denotes | Tat |
T362 | 91-94 | P21579 | denotes | p65 |
T363 | 91-94 | Q04206 | denotes | p65 |