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PMC:3317373 / 702-859 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T183 115-117 TO denotes to
T182 105-114 VB denotes performed
T181 101-104 VB denotes was
T180 90-100 NN denotes zymography
T179 82-89 NN denotes Gelatin
T178 71-80 VB denotes evaluated
T177 66-70 RB denotes also
T176 61-65 VB denotes were
T175 56-60 NN denotes MMP9
T174 52-55 CC denotes and
T173 50-51 -COMMA- denotes ,
T172 46-50 NN denotes IL-6
T171 44-45 -COMMA- denotes ,
T170 39-44 NN denotes IL-1β
T169 37-38 -COMMA- denotes ,
T168 32-37 NN denotes TNF-α
T167 29-31 IN denotes of
T166 22-28 NN denotes levels
T165 14-21 NN denotes protein
T164 10-13 CC denotes and
T163 5-9 NN denotes mRNA
T162 1-4 DT denotes The
T189 147-150 DT denotes The
T188 141-145 NN denotes MMP9
T187 138-140 IN denotes of
T186 129-137 NN denotes activity
T185 125-128 DT denotes the
T184 118-124 VB denotes detect
R112 T163 T164 arg1Of mRNA,and
R113 T165 T164 arg2Of protein,and
R114 T166 T162 arg1Of levels,The
R115 T166 T163 arg1Of levels,mRNA
R116 T166 T165 arg1Of levels,protein
R117 T166 T167 arg1Of levels,of
R118 T166 T176 arg1Of levels,were
R119 T166 T178 arg2Of levels,evaluated
R120 T168 T169 arg1Of TNF-α,","
R121 T169 T171 arg1Of ",",","
R122 T170 T169 arg2Of IL-1β,","
R123 T171 T174 arg1Of ",",and
R124 T172 T171 arg2Of IL-6,","
R125 T174 T167 arg2Of and,of
R126 T174 T173 arg1Of and,","
R127 T175 T174 arg2Of MMP9,and
R128 T178 T176 arg2Of evaluated,were
R129 T178 T177 arg1Of evaluated,also
R130 T180 T179 arg1Of zymography,Gelatin
R131 T180 T181 arg1Of zymography,was
R132 T180 T182 arg2Of zymography,performed
R133 T182 T181 arg2Of performed,was
R134 T184 T182 arg3Of detect,performed
R135 T184 T183 arg1Of detect,to
R136 T186 T184 arg2Of activity,detect
R137 T186 T185 arg1Of activity,the
R138 T186 T187 arg1Of activity,of
R139 T188 T187 arg2Of MMP9,of

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T43 39-44 Protein denotes IL-1β
T44 46-50 Protein denotes IL-6
T45 56-60 Protein denotes MMP9
T46 141-145 Protein denotes MMP9

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T265 32-37 http://www.uniprot.org/uniprot/P01375 denotes TNF-α
T266 39-44 http://www.uniprot.org/uniprot/P01584 denotes IL-1β
T267 46-50 http://www.uniprot.org/uniprot/P05231 denotes IL-6

GO-MF

Id Subject Object Predicate Lexical cue
T259 46-50 http://purl.obolibrary.org/obo/GO_0005138 denotes IL-6

sentences

Id Subject Object Predicate Lexical cue
T30 82-146 Sentence denotes Gelatin zymography was performed to detect the activity of MMP9.
T29 1-81 Sentence denotes The mRNA and protein levels of TNF-α, IL-1β, IL-6, and MMP9 were also evaluated.
T7 1-81 Sentence denotes The mRNA and protein levels of TNF-α, IL-1β, IL-6, and MMP9 were also evaluated.
T8 82-146 Sentence denotes Gelatin zymography was performed to detect the activity of MMP9.

simple1

Id Subject Object Predicate Lexical cue
T263 141-145 Protein denotes MMP9
T260 39-44 Protein denotes IL-1β
T261 46-50 Protein denotes IL-6
T262 56-60 Protein denotes MMP9

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T555 39-44 Protein denotes IL-1β
T556 46-50 Protein denotes IL-6
T557 56-60 Protein denotes MMP9
T558 141-145 Protein denotes MMP9

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T268 39-44 Protein denotes IL-1β
T269 46-50 Protein denotes IL-6
T270 56-60 Protein denotes MMP9
T271 141-145 Protein denotes MMP9

DLUT931

Id Subject Object Predicate Lexical cue
T274 39-44 Protein denotes IL-1β
T275 46-50 Protein denotes IL-6
T276 56-60 Protein denotes MMP9
T277 141-145 Protein denotes MMP9

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T584 82-100 Entity denotes Gelatin zymography
T563 138-145 Protein denotes of MMP9
T566 46-50 Protein denotes IL-6
T573 56-60 Protein denotes MMP9
T576 39-51 Protein denotes IL-1β, IL-6,
T578 5-9 Protein denotes mRNA
T581 32-37 Protein denotes TNF-α
T582 14-21 Protein denotes protein

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T457 147-150 DT denotes The
T456 145-146 . denotes .
T455 141-145 NNP denotes MMP9
T454 138-140 IN denotes of
T453 129-137 NN denotes activity
T452 125-128 DT denotes the
T451 118-124 VB denotes detect
T450 115-117 TO denotes to
T449 105-114 VBN denotes performed
T448 101-104 VBD denotes was
T447 90-100 NN denotes zymography
T446 82-89 NN denotes Gelatin
T445 80-81 . denotes .
T444 71-80 VBN denotes evaluated
T443 66-70 RB denotes also
T442 61-65 VBD denotes were
T441 56-60 NNP denotes MMP9
T440 52-55 CC denotes and
T439 50-51 , denotes ,
T438 46-50 NNP denotes IL-6
T437 44-45 , denotes ,
T436 39-44 NNP denotes IL-1β
T435 37-38 , denotes ,
T434 32-37 NNP denotes TNF-α
T433 29-31 IN denotes of
T432 22-28 NNS denotes levels
T431 14-21 NN denotes protein
T430 10-13 CC denotes and
T429 5-9 NNP denotes mRNA
T428 1-4 DT denotes The
R330 T428 T429 det The,mRNA
R331 T429 T444 nsubjpass mRNA,evaluated
R332 T430 T429 cc and,mRNA
R333 T431 T432 compound protein,levels
R334 T432 T429 conj levels,mRNA
R335 T433 T432 prep of,levels
R349 T447 T449 nsubjpass zymography,performed
R350 T448 T449 auxpass was,performed
R351 T449 T449 ROOT performed,performed
R352 T450 T451 aux to,detect
R353 T451 T449 advcl detect,performed
R354 T452 T453 det the,activity
R355 T453 T451 dobj activity,detect
R356 T454 T453 prep of,activity
R357 T455 T454 pobj MMP9,of
R358 T456 T449 punct .,performed
R336 T434 T433 pobj TNF-α,of
R337 T435 T434 punct ",",TNF-α
R338 T436 T434 conj IL-1β,TNF-α
R339 T437 T436 punct ",",IL-1β
R340 T438 T436 conj IL-6,IL-1β
R341 T439 T438 punct ",",IL-6
R342 T440 T438 cc and,IL-6
R343 T441 T438 conj MMP9,IL-6
R344 T442 T444 auxpass were,evaluated
R345 T443 T444 advmod also,evaluated
R346 T444 T444 ROOT evaluated,evaluated
R347 T445 T444 punct .,evaluated
R348 T446 T447 compound Gelatin,zymography

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T304 141-145 Protein denotes MMP9
T303 56-60 Protein denotes MMP9
T302 46-50 Protein denotes IL-6
T301 39-44 Protein denotes IL-1β
T300 32-37 Protein denotes TNF-α

testone

Id Subject Object Predicate Lexical cue
T9 141-145 Protein denotes MMP9
T8 56-60 Protein denotes MMP9
T7 46-50 Protein denotes IL-6
T6 39-44 Protein denotes IL-1β

test3

Id Subject Object Predicate Lexical cue
T20 141-145 Protein denotes MMP9
T19 56-60 Protein denotes MMP9
T18 46-50 Protein denotes IL-6
T17 39-44 Protein denotes IL-1β
T15 141-145 Protein denotes MMP9
T14 56-60 Protein denotes MMP9
T13 46-50 Protein denotes IL-6
T12 39-44 Protein denotes IL-1β