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PMC:3312845 / 15473-15931 JSONTXT

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sentences

Id Subject Object Predicate Lexical cue
T119 0-458 Sentence denotes C = ΣQ- × t/h × 1/asf × 1/ssf, where Q- is the number of cells actually counted in the dissectors that fell within the sectional profiles of the subregion seen on the sampled sections, and Asf is the areal sampling fraction calculated by the area of the counting frame of the dissector, a(frame) (of 50 × 50 μm2 in this study) and the area associated with each x, y movement, grid (x, y step) (of 250 × 250 μm2 in this study) {asf = (a(frame)/a(x, y step))}.

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T7150 427-432 Protein denotes asf =
T7148 189-192 Protein denotes Asf
T7144 54-62 Entity denotes of cells
T7141 26-29 Protein denotes ssf
T7136 12-13 Entity denotes h
T7132 10-11 Entity denotes t

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T7010 457-458 . denotes .
T7009 455-456 -RRB- denotes )
T7008 454-455 -RRB- denotes )
T7007 450-454 NN denotes step
T7006 448-449 JJ denotes y
T7005 446-447 , denotes ,
T7004 445-446 LS denotes x
T7003 444-445 -LRB- denotes (
T7002 443-444 DT denotes a
T7001 442-443 VBP denotes /
T7000 441-442 -RRB- denotes )
T6999 436-441 NN denotes frame
T6998 435-436 -LRB- denotes (
T6997 434-435 DT denotes a
T6996 433-434 -LRB- denotes (
T6995 431-432 SYM denotes =
T6994 427-430 NN denotes asf
T6993 424-425 -RRB- denotes )
T6992 419-424 NN denotes study
T6991 414-418 DT denotes this
T6990 411-413 IN denotes in
T6989 407-410 NN denotes μm2
T6988 403-406 CD denotes 250
T6987 401-402 CD denotes ×
T6986 397-400 CD denotes 250
T6985 394-396 IN denotes of
T6984 393-394 -LRB- denotes (
T6983 391-392 -RRB- denotes )
T6982 387-391 NN denotes step
T6981 385-386 JJ denotes y
T6980 383-384 , denotes ,
T6979 382-383 LS denotes x
T6978 381-382 -LRB- denotes (
T6977 376-380 NN denotes grid
T6976 374-375 , denotes ,
T6975 366-374 NN denotes movement
T6974 364-365 JJ denotes y
T6973 362-363 , denotes ,
T6972 361-362 LS denotes x
T6971 356-360 DT denotes each
T6970 351-355 IN denotes with
T6969 340-350 VBN denotes associated
T6968 335-339 NN denotes area
T6967 331-334 DT denotes the
T6966 327-330 CC denotes and
T6965 325-326 -RRB- denotes )
T6964 320-325 NN denotes study
T6963 315-319 DT denotes this
T6962 312-314 IN denotes in
T6961 308-311 NN denotes μm2
T6960 305-307 CD denotes 50
T6959 303-304 CD denotes ×
T6958 300-302 CD denotes 50
T6957 297-299 IN denotes of
T6956 296-297 -LRB- denotes (
T6955 294-295 -RRB- denotes )
T6954 289-294 NN denotes frame
T6953 288-289 -LRB- denotes (
T6952 287-288 DT denotes a
T6951 285-286 , denotes ,
T6950 276-285 NN denotes dissector
T6949 272-275 DT denotes the
T6948 269-271 IN denotes of
T6947 263-268 NN denotes frame
T6946 254-262 VBG denotes counting
T6945 250-253 DT denotes the
T6944 247-249 IN denotes of
T6943 242-246 NN denotes area
T6942 238-241 DT denotes the
T6941 235-237 IN denotes by
T6940 224-234 VBN denotes calculated
T6939 215-223 NN denotes fraction
T6938 206-214 NN denotes sampling
T6937 200-205 JJ denotes areal
T6936 196-199 DT denotes the
T6935 193-195 VBZ denotes is
T6934 189-192 NNP denotes Asf
T6933 185-188 CC denotes and
T6932 183-184 , denotes ,
T6931 175-183 NNS denotes sections
T6930 167-174 VBN denotes sampled
T6929 163-166 DT denotes the
T6928 160-162 IN denotes on
T6927 155-159 VBN denotes seen
T6926 145-154 NN denotes subregion
T6925 141-144 DT denotes the
T6924 138-140 IN denotes of
T6923 129-137 NNS denotes profiles
T6922 119-128 JJ denotes sectional
T6921 115-118 DT denotes the
T6920 108-114 IN denotes within
T6919 103-107 VBD denotes fell
T6918 98-102 WDT denotes that
T6917 87-97 NNS denotes dissectors
T6916 83-86 DT denotes the
T6915 80-82 IN denotes in
T6914 72-79 VBN denotes counted
T6913 63-71 RB denotes actually
T6912 57-62 NNS denotes cells
T6911 54-56 IN denotes of
T6910 47-53 NN denotes number
T6909 43-46 DT denotes the
T6908 40-42 VBZ denotes is
T6907 38-39 : denotes -
T6906 37-38 NNP denotes Q
T6905 31-36 WRB denotes where
T6904 29-30 , denotes ,
T6903 24-29 CD denotes 1/ssf
T6902 22-23 FW denotes ×
T6901 16-21 FW denotes 1/asf
T6900 14-15 FW denotes ×
T6899 10-13 FW denotes t/h
T6898 8-9 FW denotes ×
T6897 6-7 : denotes -
T6896 4-6 SYM denotes ΣQ
T6895 2-3 SYM denotes =
T6894 0-1 NNP denotes C
R5758 T6894 T6894 ROOT C,C
R5759 T6895 T6894 punct =,C
R5760 T6896 T6902 punct ΣQ,×
R5761 T6897 T6902 punct -,×
R5762 T6898 T6902 dep ×,×
R5763 T6899 T6902 dep t/h,×
R5764 T6900 T6902 dep ×,×
R5765 T6901 T6902 dep 1/asf,×
R5766 T6902 T7001 meta ×,/
R5767 T6903 T6902 appos 1/ssf,×
R5768 T6904 T6902 punct ",",×
R5769 T6905 T6908 advmod where,is
R5770 T6906 T6908 nsubj Q,is
R5771 T6907 T6908 punct -,is
R5772 T6908 T6902 relcl is,×
R5773 T6909 T6910 det the,number
R5774 T6910 T6908 attr number,is
R5775 T6911 T6910 prep of,number
R5776 T6912 T6911 pobj cells,of
R5777 T6913 T6914 advmod actually,counted
R5778 T6914 T6912 acl counted,cells
R5779 T6915 T6914 prep in,counted
R5780 T6916 T6917 det the,dissectors
R5781 T6917 T6915 pobj dissectors,in
R5782 T6918 T6919 nsubj that,fell
R5783 T6919 T6917 relcl fell,dissectors
R5784 T6920 T6919 prep within,fell
R5785 T6921 T6923 det the,profiles
R5786 T6922 T6923 amod sectional,profiles
R5787 T6923 T6920 pobj profiles,within
R5788 T6924 T6923 prep of,profiles
R5789 T6925 T6926 det the,subregion
R5790 T6926 T6924 pobj subregion,of
R5791 T6927 T6923 acl seen,profiles
R5792 T6928 T6927 prep on,seen
R5793 T6929 T6931 det the,sections
R5794 T6930 T6931 amod sampled,sections
R5795 T6931 T6928 pobj sections,on
R5796 T6932 T6919 punct ",",fell
R5797 T6933 T6908 cc and,is
R5798 T6934 T6935 nsubj Asf,is
R5799 T6935 T6908 conj is,is
R5800 T6936 T6939 det the,fraction
R5801 T6937 T6939 amod areal,fraction
R5802 T6938 T6939 compound sampling,fraction
R5803 T6939 T6935 attr fraction,is
R5804 T6940 T6939 acl calculated,fraction
R5805 T6941 T6940 agent by,calculated
R5806 T6942 T6943 det the,area
R5807 T6943 T6941 pobj area,by
R5832 T6968 T6982 nmod area,step
R5833 T6969 T6968 acl associated,area
R5834 T6970 T6969 prep with,associated
R5835 T6971 T6972 det each,x
R5836 T6972 T6970 pobj x,with
R5837 T6973 T6975 punct ",",movement
R5838 T6974 T6975 compound y,movement
R5839 T6975 T6982 nmod movement,step
R5840 T6976 T6975 punct ",",movement
R5841 T6977 T6975 conj grid,movement
R5842 T6978 T6979 punct (,x
R5843 T6979 T6982 dep x,step
R5844 T6980 T6982 punct ",",step
R5845 T6981 T6982 compound y,step
R5846 T6982 T6902 conj step,×
R5847 T6983 T6902 punct ),×
R5848 T6984 T6983 punct (,)
R5849 T6985 T6902 prep of,×
R5850 T6986 T6989 nummod 250,μm2
R5851 T6987 T6989 nummod ×,μm2
R5852 T6988 T6989 nummod 250,μm2
R5853 T6989 T6985 pobj μm2,of
R5854 T6990 T6989 prep in,μm2
R5855 T6991 T6992 det this,study
R5856 T6992 T6990 pobj study,in
R5857 T6993 T6989 punct ),μm2
R5858 T6994 T6995 compound asf,=
R5859 T6995 T6999 punct =,frame
R5860 T6996 T6999 punct (,frame
R5861 T6997 T6999 det a,frame
R5862 T6998 T6999 punct (,frame
R5863 T6999 T6999 ROOT frame,frame
R5864 T7000 T6902 punct ),×
R5866 T7002 T7007 det a,step
R5867 T7003 T7007 punct (,step
R5868 T7004 T7007 nmod x,step
R5869 T7005 T7007 punct ",",step
R5870 T7006 T7007 compound y,step
R5871 T7007 T7001 dobj step,/
R5872 T7008 T7001 punct ),/
R5808 T6944 T6943 prep of,area
R5809 T6945 T6947 det the,frame
R5810 T6946 T6947 amod counting,frame
R5811 T6947 T6944 pobj frame,of
R5812 T6948 T6947 prep of,frame
R5813 T6949 T6950 det the,dissector
R5814 T6950 T6948 pobj dissector,of
R5815 T6951 T6950 punct ",",dissector
R5816 T6952 T6954 det a,frame
R5817 T6953 T6954 punct (,frame
R5818 T6954 T6950 appos frame,dissector
R5819 T6955 T6950 punct ),dissector
R5820 T6956 T6950 punct (,dissector
R5821 T6957 T6950 prep of,dissector
R5822 T6958 T6960 nummod 50,50
R5823 T6959 T6960 nummod ×,50
R5824 T6960 T6961 nummod 50,μm2
R5825 T6961 T6957 pobj μm2,of
R5826 T6962 T6950 prep in,dissector
R5827 T6963 T6964 det this,study
R5828 T6964 T6962 pobj study,in
R5829 T6965 T6935 punct ),is
R5830 T6966 T6902 cc and,×
R5831 T6967 T6968 det the,area

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T7125 26-29 Protein denotes ssf
T7124 16-25 Protein denotes 1/asf × 1