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PMC:3291650 / 18923-19789 JSONTXT

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test3

Id Subject Object Predicate Lexical cue
T20776 504-508 Protein denotes IL-6
T20775 497-502 Protein denotes MCP-1
T20774 490-495 Protein denotes MIP-2
T20773 486-488 Protein denotes KC
T20772 48-58 Negative_regulation denotes deficiency
T20771 504-508 Protein denotes IL-6
T20770 497-502 Protein denotes MCP-1
T20769 490-495 Protein denotes MIP-2
T20768 486-488 Protein denotes KC

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T20964 861-865 CD denotes 0.01
T20963 860-861 SYM denotes <
T20962 857-860 NN denotes **p
T20961 855-856 -COLON- denotes ;
T20960 851-855 CD denotes 0.05
T20959 850-851 SYM denotes <
T20958 848-850 NN denotes *p
T20957 835-847 NN denotes experiments.
T20956 823-834 JJ denotes independent
T20955 821-822 CD denotes 2
T20954 818-820 IN denotes of
T20953 803-817 JJ denotes representative
T20952 799-802 VB denotes are
T20951 795-798 CC denotes and
T20948 780-784 NN denotes mice
T20947 778-779 CD denotes 5
T20946 772-777 JJ denotes least
T20945 769-771 IN denotes at
T20944 766-768 IN denotes of
T20943 762-765 NN denotes SEM
T20942 758-761 CC denotes +/−
T20941 749-757 NN denotes averages
T20940 745-748 VB denotes are
T20939 737-744 NN denotes Numbers
T20938 734-735 -RRB- denotes )
T20937 733-734 NN denotes D
T20936 732-733 -LRB- denotes (
T20935 727-731 NN denotes p.i.
T20934 722-726 NN denotes days
T20933 719-721 CD denotes 10
T20932 715-718 CC denotes and
T20931 713-714 CD denotes 7
T20930 711-712 -COMMA- denotes ,
T20929 710-711 CD denotes 4
T20928 707-709 IN denotes at
T20927 697-706 NN denotes cytometry
T20926 692-696 NN denotes flow
T20925 689-691 IN denotes by
T20924 680-688 VB denotes analyzed
T20923 675-679 VB denotes were
T20922 671-674 NN denotes BAL
T20921 668-670 IN denotes in
T20920 658-667 NN denotes monocytes
T20919 654-657 CC denotes and
T20918 642-653 NN denotes neutrophils
T20917 640-641 -COMMA- denotes ,
T20916 629-640 NN denotes macrophages
T20915 620-628 JJ denotes alveolar
T20914 611-619 JJ denotes resident
T20913 608-610 IN denotes of
T20912 600-607 NN denotes numbers
T20911 591-599 JJ denotes Absolute
T20910 588-589 -RRB- denotes )
T20909 587-588 NN denotes C
T20908 586-587 -LRB- denotes (
T20907 573-585 NN denotes technologies
T20906 560-572 JJ denotes multiplexing
T20905 556-559 CC denotes and
T20904 550-555 NN denotes ELISA
T20903 547-549 IN denotes by
T20902 538-546 VB denotes analyzed
T20901 533-537 VB denotes were
T20900 526-532 NN denotes levels
T20899 518-525 NN denotes protein
T20898 513-517 NN denotes IFNα
T20897 509-512 CC denotes and
T20896 504-508 NN denotes IL-6
T20895 502-503 -COMMA- denotes ,
T20894 497-502 NN denotes MCP-1
T20893 495-496 -COMMA- denotes ,
T20892 490-495 NN denotes MIP-2
T20891 488-489 -COMMA- denotes ,
T20890 486-488 NN denotes KC
T20889 482-485 CC denotes and
T20888 477-481 NN denotes p.i.
T20887 472-476 NN denotes days
T20886 469-471 CD denotes 10
T20885 465-468 CC denotes and
T20884 463-464 CD denotes 7
T20883 461-462 -COMMA- denotes ,
T20882 460-461 CD denotes 4
T20881 457-459 IN denotes at
T20880 452-456 NN denotes mice
T20879 443-451 JJ denotes infected
T20878 439-442 NN denotes IAV
T20877 434-438 IN denotes from
T20876 425-433 VB denotes isolated
T20875 421-424 VB denotes was
T20874 417-420 NN denotes BAL
T20873 405-415 JJ denotes detectable
T20872 401-404 RB denotes not
T20871 399-400 -COMMA- denotes ,
T20870 397-399 NN denotes ND
T20869 390-395 NN denotes limit
T20868 380-389 NN denotes detection
T20867 376-379 DT denotes the
T20866 365-375 VB denotes represents
T20865 360-364 NN denotes line
T20864 353-359 JJ denotes dashed
T20863 349-352 DT denotes The
T20862 346-347 -RRB- denotes )
T20861 345-346 NN denotes B
T20860 344-345 -LRB- denotes (
T20859 337-343 NN denotes TCID50
T20858 332-336 JJ denotes mean
T20857 329-331 IN denotes as
T20856 319-328 VB denotes expressed
T20855 315-318 CC denotes and
T20854 306-314 VB denotes measured
T20853 301-305 VB denotes were
T20852 296-300 NN denotes lung
T20851 292-295 DT denotes the
T20850 289-291 IN denotes in
T20849 282-288 NN denotes titers
T20848 276-281 JJ denotes viral
T20847 274-275 -RRB- denotes )
T20846 270-274 NN denotes p.i.
T20845 269-270 -LRB- denotes (
T20844 259-268 NN denotes infection
T20843 254-258 NN denotes post
T20842 251-253 CD denotes 10
T20841 247-250 CC denotes and
T20840 245-246 CD denotes 7
T20839 243-244 -COMMA- denotes ,
T20838 242-243 CD denotes 4
T20837 238-241 NN denotes day
T20836 235-237 IN denotes At
T20835 232-233 -RRB- denotes )
T20834 231-232 NN denotes A
T20833 230-231 -LRB- denotes (
T20832 220-229 VB denotes monitored
T20831 216-219 VB denotes was
T20830 211-215 NN denotes loss
T20829 204-210 NN denotes weight
T20828 200-203 CC denotes and
T20827 196-199 NN denotes IAV
T20826 193-195 IN denotes of
T20825 188-192 NN denotes dose
T20824 178-187 JJ denotes sublethal
T20823 176-177 DT denotes a
T20822 171-175 IN denotes with
T20821 158-170 RB denotes intranasally
T20820 149-157 VB denotes infected
T20819 144-148 VB denotes were
T20818 139-143 NN denotes mice
T20817 128-138 NN denotes A20myel-KO
T20816 124-127 CC denotes and
T20815 113-123 NN denotes A20myel-WT
T20814 102-111 NN denotes infection
T20813 97-101 NN denotes lung
T20812 93-96 NN denotes IAV
T20811 85-92 IN denotes against
T20810 76-84 VB denotes protects
T20809 70-75 NN denotes cells
T20808 62-69 JJ denotes myeloid
T20807 59-61 IN denotes in
T20806 48-58 NN denotes deficiency
T20805 44-47 NN denotes A20
T20950 789-794 NN denotes group
T20949 785-788 IN denotes per
R15498 T20806 T20805 arg1Of deficiency,A20
R15499 T20806 T20807 arg1Of deficiency,in
R15500 T20806 T20810 arg1Of deficiency,protects
R15501 T20809 T20807 arg2Of cells,in
R15502 T20809 T20808 arg1Of cells,myeloid
R15503 T20810 T20811 arg1Of protects,against
R15504 T20814 T20811 arg2Of infection,against
R15505 T20814 T20812 arg1Of infection,IAV
R15506 T20814 T20813 arg1Of infection,lung
R15507 T20815 T20816 arg1Of A20myel-WT,and
R15508 T20817 T20816 arg2Of A20myel-KO,and
R15509 T20818 T20815 arg1Of mice,A20myel-WT
R15510 T20818 T20817 arg1Of mice,A20myel-KO
R15511 T20818 T20819 arg1Of mice,were
R15512 T20818 T20820 arg2Of mice,infected
R15513 T20820 T20819 arg2Of infected,were
R15514 T20820 T20821 arg1Of infected,intranasally
R15515 T20820 T20822 arg1Of infected,with
R15516 T20820 T20828 arg1Of infected,and
R15517 T20825 T20822 arg2Of dose,with
R15518 T20825 T20823 arg1Of dose,a
R15519 T20825 T20824 arg1Of dose,sublethal
R15520 T20825 T20826 arg1Of dose,of
R15521 T20827 T20826 arg2Of IAV,of
R15522 T20830 T20829 arg1Of loss,weight
R15523 T20830 T20831 arg1Of loss,was
R15524 T20830 T20832 arg2Of loss,monitored
R15525 T20832 T20828 arg2Of monitored,and
R15526 T20832 T20831 arg2Of monitored,was
R15527 T20832 T20833 arg1Of monitored,(
R15528 T20834 T20833 arg2Of A,(
R15529 T20835 T20833 arg3Of ),(
R15530 T20838 T20839 arg1Of 4,","
R15531 T20839 T20841 arg1Of ",",and
R15532 T20840 T20839 arg2Of 7,","
R15533 T20842 T20841 arg2Of 10,and
R15534 T20844 T20836 arg2Of infection,At
R15535 T20844 T20837 arg1Of infection,day
R15536 T20844 T20838 arg1Of infection,4
R15537 T20844 T20840 arg1Of infection,7
R15538 T20844 T20842 arg1Of infection,10
R15539 T20844 T20843 arg1Of infection,post
R15540 T20846 T20845 arg2Of p.i.,(
R15541 T20847 T20845 arg3Of ),(
R15542 T20849 T20845 arg1Of titers,(
R15543 T20849 T20848 arg1Of titers,viral
R15544 T20849 T20850 arg1Of titers,in
R15545 T20849 T20853 arg1Of titers,were
R15546 T20849 T20854 arg2Of titers,measured
R15547 T20849 T20856 arg2Of titers,expressed
R15548 T20852 T20850 arg2Of lung,in
R15549 T20852 T20851 arg1Of lung,the
R15550 T20854 T20855 arg1Of measured,and
R15551 T20855 T20836 arg1Of and,At
R15552 T20855 T20853 arg2Of and,were
R15553 T20856 T20855 arg2Of expressed,and
R15554 T20856 T20857 arg1Of expressed,as
R15555 T20859 T20857 arg2Of TCID50,as
R15556 T20859 T20858 arg1Of TCID50,mean
R15557 T20859 T20860 arg1Of TCID50,(
R15558 T20861 T20860 arg2Of B,(
R15559 T20862 T20860 arg3Of ),(
R15560 T20865 T20863 arg1Of line,The
R15561 T20865 T20864 arg1Of line,dashed
R15562 T20865 T20866 arg1Of line,represents
R15563 T20869 T20866 arg2Of limit,represents
R15564 T20869 T20867 arg1Of limit,the
R15565 T20869 T20868 arg1Of limit,detection
R15566 T20870 T20871 arg1Of ND,","
R15567 T20870 T20873 arg1Of ND,detectable
R15568 T20873 T20872 arg1Of detectable,not
R15569 T20874 T20875 arg1Of BAL,was
R15570 T20874 T20876 arg2Of BAL,isolated
R15571 T20876 T20875 arg2Of isolated,was
R15572 T20876 T20877 arg1Of isolated,from
R15573 T20876 T20881 arg1Of isolated,at
R15574 T20876 T20883 arg1Of isolated,","
R15575 T20880 T20877 arg2Of mice,from
R15576 T20880 T20878 arg1Of mice,IAV
R15577 T20880 T20879 arg1Of mice,infected
R15578 T20882 T20881 arg2Of 4,at
R15579 T20884 T20885 arg1Of 7,and
R15580 T20886 T20885 arg2Of 10,and
R15581 T20888 T20884 arg1Of p.i.,7
R15582 T20888 T20886 arg1Of p.i.,10
R15583 T20888 T20887 arg1Of p.i.,days
R15584 T20888 T20889 arg1Of p.i.,and
R15585 T20889 T20901 arg1Of and,were
R15586 T20889 T20902 arg2Of and,analyzed
R15587 T20890 T20891 arg1Of KC,","
R15588 T20891 T20893 arg1Of ",",","
R15589 T20892 T20891 arg2Of MIP-2,","
R15590 T20893 T20895 arg1Of ",",","
R15591 T20894 T20893 arg2Of MCP-1,","
R15592 T20895 T20897 arg1Of ",",and
R15593 T20896 T20895 arg2Of IL-6,","
R15594 T20897 T20889 arg2Of and,and
R15595 T20900 T20897 arg2Of levels,and
R15596 T20900 T20898 arg1Of levels,IFNα
R15597 T20900 T20899 arg1Of levels,protein
R15598 T20902 T20883 arg2Of analyzed,","
R15599 T20902 T20901 arg2Of analyzed,were
R15600 T20904 T20905 arg1Of ELISA,and
R15601 T20906 T20905 arg2Of multiplexing,and
R15602 T20907 T20902 arg1Of technologies,analyzed
R15603 T20907 T20903 arg2Of technologies,by
R15604 T20907 T20904 arg1Of technologies,ELISA
R15605 T20907 T20906 arg1Of technologies,multiplexing
R15606 T20907 T20908 arg1Of technologies,(
R15607 T20909 T20908 arg2Of C,(
R15608 T20910 T20908 arg3Of ),(
R15609 T20912 T20911 arg1Of numbers,Absolute
R15610 T20912 T20913 arg1Of numbers,of
R15611 T20912 T20923 arg1Of numbers,were
R15612 T20912 T20924 arg2Of numbers,analyzed
R15613 T20916 T20917 arg1Of macrophages,","
R15614 T20917 T20919 arg1Of ",",and
R15615 T20918 T20917 arg2Of neutrophils,","
R15616 T20919 T20913 arg2Of and,of
R15617 T20919 T20914 arg1Of and,resident
R15618 T20919 T20915 arg1Of and,alveolar
R15619 T20919 T20921 arg1Of and,in
R15620 T20920 T20919 arg2Of monocytes,and
R15621 T20922 T20921 arg2Of BAL,in
R15622 T20924 T20923 arg2Of analyzed,were
R15623 T20924 T20928 arg1Of analyzed,at
R15624 T20927 T20924 arg1Of cytometry,analyzed
R15625 T20927 T20925 arg2Of cytometry,by
R15626 T20927 T20926 arg1Of cytometry,flow
R15627 T20929 T20930 arg1Of 4,","
R15628 T20930 T20932 arg1Of ",",and
R15629 T20931 T20930 arg2Of 7,","
R15630 T20933 T20932 arg2Of 10,and
R15631 T20935 T20928 arg2Of p.i.,at
R15632 T20935 T20929 arg1Of p.i.,4
R15633 T20935 T20931 arg1Of p.i.,7
R15634 T20935 T20933 arg1Of p.i.,10
R15635 T20935 T20934 arg1Of p.i.,days
R15636 T20935 T20936 arg1Of p.i.,(
R15637 T20937 T20936 arg2Of D,(
R15638 T20938 T20936 arg3Of ),(
R15639 T20939 T20940 arg1Of Numbers,are
R15640 T20939 T20952 arg1Of Numbers,are
R15641 T20939 T20953 arg1Of Numbers,representative
R15642 T20940 T20951 arg1Of are,and
R15643 T20941 T20942 arg1Of averages,+/−
R15644 T20942 T20940 arg2Of +/−,are
R15645 T20942 T20944 arg1Of +/−,of
R15646 T20943 T20942 arg2Of SEM,+/−
R15647 T20947 T20945 arg1Of 5,at
R15648 T20947 T20946 arg1Of 5,least
R15649 T20948 T20944 arg2Of mice,of
R15650 T20948 T20947 arg1Of mice,5
R15651 T20948 T20949 arg1Of mice,per
R15652 T20950 T20949 arg2Of group,per
R15653 T20952 T20951 arg2Of are,and
R15654 T20953 T20952 arg2Of representative,are
R15655 T20953 T20954 arg1Of representative,of
R15656 T20960 T20954 arg2Of 0.05,of
R15657 T20960 T20955 arg1Of 0.05,2
R15658 T20960 T20956 arg1Of 0.05,independent
R15659 T20960 T20957 arg1Of 0.05,experiments.
R15660 T20960 T20958 arg1Of 0.05,*p
R15661 T20960 T20959 arg1Of 0.05,<
R15662 T20960 T20961 arg1Of 0.05,;
R15663 T20964 T20961 arg2Of 0.01,;
R15664 T20964 T20962 arg1Of 0.01,**p
R15665 T20964 T20963 arg1Of 0.01,<

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T20794 504-508 Protein denotes IL-6
T20793 497-502 Protein denotes MCP-1
T20792 490-495 Protein denotes MIP-2
T20791 486-488 Protein denotes KC

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T21144 504-508 http://www.uniprot.org/uniprot/P05231 denotes IL-6
T21143 490-495 http://www.uniprot.org/uniprot/P10889 denotes MIP-2
T21142 44-47 http://www.uniprot.org/uniprot/P21580 denotes A20

UBERON-AE

Id Subject Object Predicate Lexical cue
T20778 296-300 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T20777 97-101 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung

GO-BP

Id Subject Object Predicate Lexical cue
T20796 620-628 http://purl.obolibrary.org/obo/GO_0048286 denotes alveolar
T20795 497-500 http://purl.obolibrary.org/obo/GO_0004298 denotes MCP

GO-MF

Id Subject Object Predicate Lexical cue
T20798 501-506 http://purl.obolibrary.org/obo/GO_0005149 denotes 1, IL
T20797 497-500 http://purl.obolibrary.org/obo/GO_0004298 denotes MCP
T20799 504-508 http://purl.obolibrary.org/obo/GO_0005138 denotes IL-6

GO-CC

Id Subject Object Predicate Lexical cue
T20800 70-75 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T20786 737-866 Sentence denotes Numbers are averages +/− SEM of at least 5 mice per group and are representative of 2 independent experiments. *p<0.05; **p<0.01.
T20785 591-736 Sentence denotes Absolute numbers of resident alveolar macrophages, neutrophils and monocytes in BAL were analyzed by flow cytometry at 4, 7 and 10 days p.i. (D).
T20784 417-590 Sentence denotes BAL was isolated from IAV infected mice at 4, 7 and 10 days p.i. and KC, MIP-2, MCP-1, IL-6 and IFNα protein levels were analyzed by ELISA and multiplexing technologies (C).
T20783 397-416 Sentence denotes ND, not detectable.
T20782 349-396 Sentence denotes The dashed line represents the detection limit.
T20781 235-348 Sentence denotes At day 4, 7 and 10 post infection (p.i.) viral titers in the lung were measured and expressed as mean TCID50 (B).
T20780 113-234 Sentence denotes A20myel-WT and A20myel-KO mice were infected intranasally with a sublethal dose of IAV and weight loss was monitored (A).
T20779 44-112 Sentence denotes A20 deficiency in myeloid cells protects against IAV lung infection.
T118 0-112 Sentence denotes 10.1371/journal.ppat.1002570.g003 Figure 3 A20 deficiency in myeloid cells protects against IAV lung infection.
T119 113-234 Sentence denotes A20myel-WT and A20myel-KO mice were infected intranasally with a sublethal dose of IAV and weight loss was monitored (A).
T120 235-348 Sentence denotes At day 4, 7 and 10 post infection (p.i.) viral titers in the lung were measured and expressed as mean TCID50 (B).
T121 349-396 Sentence denotes The dashed line represents the detection limit.
T122 397-416 Sentence denotes ND, not detectable.
T123 417-590 Sentence denotes BAL was isolated from IAV infected mice at 4, 7 and 10 days p.i. and KC, MIP-2, MCP-1, IL-6 and IFNα protein levels were analyzed by ELISA and multiplexing technologies (C).
T124 591-736 Sentence denotes Absolute numbers of resident alveolar macrophages, neutrophils and monocytes in BAL were analyzed by flow cytometry at 4, 7 and 10 days p.i. (D).
T125 737-866 Sentence denotes Numbers are averages +/− SEM of at least 5 mice per group and are representative of 2 independent experiments. *p<0.05; **p<0.01.

simple1

Id Subject Object Predicate Lexical cue
T20804 504-508 Protein denotes IL-6
T20803 497-502 Protein denotes MCP-1
T20802 490-495 Protein denotes MIP-2
T20801 486-488 Protein denotes KC

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T21174 504-508 Protein denotes IL-6
T21173 497-502 Protein denotes MCP-1
T21172 490-495 Protein denotes MIP-2
T21171 486-488 Protein denotes KC

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T21148 504-508 Protein denotes IL-6
T21147 497-502 Protein denotes MCP-1
T21146 490-495 Protein denotes MIP-2
T21145 486-488 Protein denotes KC

DLUT931

Id Subject Object Predicate Lexical cue
T21152 504-508 Protein denotes IL-6
T21151 497-502 Protein denotes MCP-1
T21150 490-495 Protein denotes MIP-2
T21149 486-488 Protein denotes KC

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T21191 434-456 Regulation denotes from IAV infected mice
T21190 642-653 Entity denotes neutrophils
T21189 671-674 Protein denotes BAL
T21188 486-488 Protein denotes KC
T21187 497-502 Protein denotes MCP-1
T21186 128-143 Protein denotes A20myel-KO mice
T21185 486-532 Protein denotes KC, MIP-2, MCP-1, IL-6 and IFNα protein levels
T21184 62-75 Entity denotes myeloid cells
T21183 490-495 Protein denotes MIP-2
T21182 780-784 Protein denotes mice
T21181 611-640 Entity denotes resident alveolar macrophages
T21180 504-508 Protein denotes IL-6
T21179 658-674 Entity denotes monocytes in BAL
T21178 513-517 Protein denotes IFNα
T21177 434-456 Protein denotes from IAV infected mice
T21176 44-47 Protein denotes A20
T21175 417-420 Protein denotes BAL
R15841 T21177 T21191 themeOf from IAV infected mice,from IAV infected mice

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T21141 865-866 . denotes .
T21140 861-865 CD denotes 0.01
T21139 860-861 FW denotes <
T21138 859-860 FW denotes p
T21137 857-859 SYM denotes **
T21136 855-856 : denotes ;
T21135 851-855 CD denotes 0.05
T21134 850-851 NN denotes <
T21133 849-850 NN denotes p
T21132 848-849 SYM denotes *
T21131 846-847 . denotes .
T21130 835-846 NNS denotes experiments
T21129 823-834 JJ denotes independent
T21128 821-822 CD denotes 2
T21127 818-820 IN denotes of
T21126 803-817 NN denotes representative
T21125 799-802 VBP denotes are
T21124 795-798 CC denotes and
T21123 789-794 NN denotes group
T21122 785-788 IN denotes per
T21121 780-784 NNS denotes mice
T21120 778-779 CD denotes 5
T21119 772-777 JJS denotes least
T21118 769-771 IN denotes at
T21117 766-768 IN denotes of
T21116 762-765 NNP denotes SEM
T21115 760-761 CD denotes −
T21114 759-760 CD denotes /
T21113 758-759 VBP denotes +
T21112 749-757 NNS denotes averages
T21111 745-748 VBP denotes are
T21110 737-744 NNS denotes Numbers
T21109 735-736 . denotes .
T21108 734-735 -RRB- denotes )
T21107 733-734 NNP denotes D
T21106 732-733 -LRB- denotes (
T21105 727-731 VBP denotes p.i.
T21104 722-726 NNS denotes days
T21103 719-721 CD denotes 10
T21102 715-718 CC denotes and
T21101 713-714 CD denotes 7
T21100 711-712 , denotes ,
T21099 710-711 CD denotes 4
T21098 707-709 IN denotes at
T21097 697-706 NN denotes cytometry
T21096 692-696 NN denotes flow
T21095 689-691 IN denotes by
T21094 680-688 VBN denotes analyzed
T21093 675-679 VBD denotes were
T21092 671-674 NNP denotes BAL
T21091 668-670 IN denotes in
T21090 658-667 NNS denotes monocytes
T21089 654-657 CC denotes and
T21088 642-653 NNS denotes neutrophils
T21087 640-641 , denotes ,
T21086 629-640 NNS denotes macrophages
T21085 620-628 NN denotes alveolar
T21084 611-619 NN denotes resident
T21083 608-610 IN denotes of
T21082 600-607 NNS denotes numbers
T21081 591-599 JJ denotes Absolute
T21080 589-590 . denotes .
T21047 439-442 NNP denotes IAV
T21046 434-438 IN denotes from
T21045 425-433 VBN denotes isolated
T21044 421-424 VBD denotes was
T21043 417-420 NNP denotes BAL
T21042 415-416 . denotes .
T21041 405-415 JJ denotes detectable
T21040 401-404 RB denotes not
T21039 399-400 , denotes ,
T21038 397-399 NNP denotes ND
T21037 395-396 . denotes .
T21036 390-395 NN denotes limit
T20992 196-199 NNP denotes IAV
T20991 193-195 IN denotes of
T20990 188-192 NN denotes dose
T20989 178-187 JJ denotes sublethal
T20988 176-177 DT denotes a
T20987 171-175 IN denotes with
T20986 158-170 RB denotes intranasally
T20985 149-157 JJ denotes infected
T20984 144-148 VBD denotes were
T20983 139-143 NNS denotes mice
T20982 128-138 JJ denotes A20myel-KO
T20981 124-127 CC denotes and
T20980 113-123 NN denotes A20myel-WT
T20979 111-112 . denotes .
T20978 102-111 NN denotes infection
T20977 97-101 NN denotes lung
T20976 93-96 NNP denotes IAV
T20975 85-92 IN denotes against
T20974 76-84 VBZ denotes protects
T20973 70-75 NNS denotes cells
T20972 62-69 JJ denotes myeloid
T20971 59-61 IN denotes in
T20970 48-58 NN denotes deficiency
T20969 44-47 CD denotes A20
T21035 380-389 NN denotes detection
T21034 376-379 DT denotes the
T21033 365-375 VBZ denotes represents
T21032 360-364 NN denotes line
T21031 353-359 VBN denotes dashed
T21030 349-352 DT denotes The
T21029 347-348 . denotes .
T21028 346-347 -RRB- denotes )
T21027 345-346 NN denotes B
T21026 344-345 -LRB- denotes (
T21025 337-343 CD denotes TCID50
T21024 332-336 JJ denotes mean
T21023 329-331 IN denotes as
T21022 319-328 VBN denotes expressed
T21021 315-318 CC denotes and
T21020 306-314 VBN denotes measured
T21019 301-305 VBD denotes were
T21018 296-300 NN denotes lung
T21017 292-295 DT denotes the
T21016 289-291 IN denotes in
T21015 282-288 NNS denotes titers
T21014 276-281 JJ denotes viral
T21013 274-275 -RRB- denotes )
T21012 270-274 FW denotes p.i.
T21011 269-270 -LRB- denotes (
T21010 259-268 NN denotes infection
T21009 254-258 NN denotes post
T21008 251-253 CD denotes 10
T21007 247-250 CC denotes and
T21006 245-246 CD denotes 7
T21005 243-244 , denotes ,
T21004 242-243 CD denotes 4
T21003 238-241 NN denotes day
T21002 235-237 IN denotes At
T21001 233-234 . denotes .
T21000 232-233 -RRB- denotes )
T20999 231-232 NNP denotes A
T20998 230-231 -LRB- denotes (
T20997 220-229 VBN denotes monitored
T20996 216-219 VBD denotes was
T20995 211-215 NN denotes loss
T20994 204-210 NN denotes weight
T20993 200-203 CC denotes and
T21079 588-589 -RRB- denotes )
T21078 587-588 NNP denotes C
T21077 586-587 -LRB- denotes (
T21076 573-585 NNS denotes technologies
T21075 560-572 VBG denotes multiplexing
T21074 556-559 CC denotes and
T21073 550-555 NNP denotes ELISA
T21072 547-549 IN denotes by
T21071 538-546 VBN denotes analyzed
T21070 533-537 VBD denotes were
T21069 526-532 NNS denotes levels
T21068 518-525 NN denotes protein
T21067 513-517 NNP denotes IFNα
T21066 509-512 CC denotes and
T21065 504-508 NNP denotes IL-6
T21064 502-503 , denotes ,
T21063 497-502 NNP denotes MCP-1
T21062 495-496 , denotes ,
T21061 490-495 NNP denotes MIP-2
T21060 488-489 , denotes ,
T21059 486-488 NNP denotes KC
T21058 482-485 CC denotes and
T21057 477-481 JJ denotes p.i.
T21056 472-476 NNS denotes days
T21055 469-471 CD denotes 10
T21054 465-468 CC denotes and
T21053 463-464 CD denotes 7
T21052 461-462 , denotes ,
T21051 460-461 CD denotes 4
T21050 457-459 IN denotes at
T21049 452-456 NNS denotes mice
T21048 443-451 JJ denotes infected
R15666 T20969 T20970 nummod A20,deficiency
R15667 T20970 T20974 nsubj deficiency,protects
R15668 T20971 T20970 prep in,deficiency
R15669 T20972 T20973 amod myeloid,cells
R15670 T20973 T20971 pobj cells,in
R15671 T20974 T20974 ROOT protects,protects
R15672 T20975 T20974 prep against,protects
R15673 T20976 T20978 compound IAV,infection
R15674 T20977 T20978 compound lung,infection
R15675 T20978 T20975 pobj infection,against
R15676 T20979 T20974 punct .,protects
R15677 T20980 T20984 nsubj A20myel-WT,were
R15678 T20981 T20980 cc and,A20myel-WT
R15679 T20982 T20983 amod A20myel-KO,mice
R15680 T20983 T20980 conj mice,A20myel-WT
R15681 T20984 T20984 ROOT were,were
R15682 T20985 T20984 acomp infected,were
R15683 T20986 T20985 advmod intranasally,infected
R15684 T20987 T20985 prep with,infected
R15685 T20988 T20990 det a,dose
R15686 T20989 T20990 amod sublethal,dose
R15687 T20990 T20987 pobj dose,with
R15688 T20991 T20990 prep of,dose
R15689 T20992 T20991 pobj IAV,of
R15690 T20993 T20990 cc and,dose
R15691 T20994 T20995 compound weight,loss
R15692 T20995 T20990 conj loss,dose
R15693 T20996 T20997 auxpass was,monitored
R15694 T20997 T20984 conj monitored,were
R15695 T20998 T20999 punct (,A
R15696 T20999 T20997 oprd A,monitored
R15697 T21000 T20999 punct ),A
R15698 T21001 T20984 punct .,were
R15699 T21002 T21020 prep At,measured
R15700 T21003 T21002 pobj day,At
R15701 T21004 T21003 nummod 4,day
R15702 T21005 T21020 punct ",",measured
R15703 T21006 T21010 nummod 7,infection
R15704 T21007 T21006 cc and,7
R15705 T21008 T21006 conj 10,7
R15706 T21009 T21010 compound post,infection
R15707 T21010 T21015 nmod infection,titers
R15708 T21011 T21012 punct (,p.i.
R15709 T21012 T21010 appos p.i.,infection
R15710 T21013 T21010 punct ),infection
R15711 T21014 T21015 amod viral,titers
R15712 T21015 T21020 nsubjpass titers,measured
R15713 T21016 T21015 prep in,titers
R15714 T21017 T21018 det the,lung
R15715 T21018 T21016 pobj lung,in
R15716 T21019 T21020 auxpass were,measured
R15717 T21020 T21020 ROOT measured,measured
R15718 T21021 T21020 cc and,measured
R15719 T21022 T21020 conj expressed,measured
R15720 T21023 T21022 prep as,expressed
R15721 T21024 T21023 amod mean,as
R15722 T21025 T21024 nummod TCID50,mean
R15723 T21026 T21027 punct (,B
R15724 T21027 T21023 pobj B,as
R15725 T21028 T21022 punct ),expressed
R15726 T21029 T21020 punct .,measured
R15727 T21030 T21032 det The,line
R15728 T21031 T21032 amod dashed,line
R15729 T21032 T21033 nsubj line,represents
R15730 T21033 T21033 ROOT represents,represents
R15731 T21034 T21036 det the,limit
R15732 T21035 T21036 compound detection,limit
R15733 T21036 T21033 dobj limit,represents
R15734 T21037 T21033 punct .,represents
R15735 T21038 T21038 ROOT ND,ND
R15736 T21039 T21038 punct ",",ND
R15737 T21040 T21041 neg not,detectable
R15738 T21041 T21038 amod detectable,ND
R15739 T21042 T21038 punct .,ND
R15740 T21043 T21044 nsubj BAL,was
R15741 T21044 T21044 ROOT was,was
R15742 T21045 T21044 acomp isolated,was
R15743 T21046 T21045 prep from,isolated
R15744 T21047 T21049 amod IAV,mice
R15745 T21048 T21049 amod infected,mice
R15746 T21049 T21046 pobj mice,from
R15747 T21050 T21045 prep at,isolated
R15748 T21051 T21056 nummod 4,days
R15749 T21052 T21051 punct ",",4
R15750 T21053 T21051 conj 7,4
R15751 T21054 T21053 cc and,7
R15752 T21055 T21053 conj 10,7
R15753 T21056 T21057 npadvmod days,p.i.
R15754 T21057 T21069 nmod p.i.,levels
R15755 T21058 T21057 cc and,p.i.
R15756 T21059 T21057 conj KC,p.i.
R15757 T21060 T21059 punct ",",KC
R15758 T21061 T21059 conj MIP-2,KC
R15759 T21062 T21061 punct ",",MIP-2
R15760 T21063 T21061 conj MCP-1,MIP-2
R15761 T21064 T21063 punct ",",MCP-1
R15762 T21065 T21063 conj IL-6,MCP-1
R15763 T21066 T21065 cc and,IL-6
R15764 T21067 T21065 conj IFNα,IL-6
R15765 T21068 T21069 compound protein,levels
R15766 T21069 T21050 pobj levels,at
R15767 T21070 T21071 auxpass were,analyzed
R15768 T21071 T21044 conj analyzed,was
R15769 T21072 T21071 agent by,analyzed
R15770 T21073 T21072 pobj ELISA,by
R15771 T21074 T21071 cc and,analyzed
R15772 T21075 T21076 amod multiplexing,technologies
R15773 T21076 T21071 conj technologies,analyzed
R15774 T21077 T21078 punct (,C
R15775 T21078 T21076 appos C,technologies
R15776 T21079 T21076 punct ),technologies
R15777 T21080 T21044 punct .,was
R15778 T21081 T21082 amod Absolute,numbers
R15779 T21082 T21094 nsubjpass numbers,analyzed
R15780 T21083 T21082 prep of,numbers
R15781 T21084 T21086 compound resident,macrophages
R15782 T21085 T21086 compound alveolar,macrophages
R15783 T21086 T21083 pobj macrophages,of
R15784 T21087 T21086 punct ",",macrophages
R15785 T21088 T21086 conj neutrophils,macrophages
R15786 T21089 T21088 cc and,neutrophils
R15787 T21090 T21088 conj monocytes,neutrophils
R15788 T21091 T21086 prep in,macrophages
R15789 T21092 T21091 pobj BAL,in
R15790 T21093 T21094 auxpass were,analyzed
R15791 T21094 T21094 ROOT analyzed,analyzed
R15792 T21095 T21094 agent by,analyzed
R15793 T21096 T21095 pobj flow,by
R15794 T21097 T21094 npadvmod cytometry,analyzed
R15795 T21098 T21094 prep at,analyzed
R15796 T21099 T21104 nummod 4,days
R15797 T21100 T21099 punct ",",4
R15798 T21101 T21099 conj 7,4
R15799 T21102 T21101 cc and,7
R15800 T21103 T21101 conj 10,7
R15801 T21104 T21098 pobj days,at
R15802 T21105 T21094 conj p.i.,analyzed
R15803 T21106 T21107 punct (,D
R15804 T21107 T21105 appos D,p.i.
R15805 T21108 T21105 punct ),p.i.
R15806 T21109 T21094 punct .,analyzed
R15807 T21110 T21111 nsubj Numbers,are
R15808 T21111 T21111 ROOT are,are
R15809 T21112 T21111 attr averages,are
R15810 T21113 T21111 conj +,are
R15811 T21114 T21116 nummod /,SEM
R15812 T21115 T21116 nummod −,SEM
R15813 T21116 T21111 attr SEM,are
R15814 T21117 T21116 prep of,SEM
R15815 T21118 T21119 advmod at,least
R15816 T21119 T21120 advmod least,5
R15817 T21120 T21121 nummod 5,mice
R15818 T21121 T21117 pobj mice,of
R15819 T21122 T21121 prep per,mice
R15820 T21123 T21122 pobj group,per
R15821 T21124 T21111 cc and,are
R15822 T21125 T21111 conj are,are
R15823 T21126 T21125 attr representative,are
R15824 T21127 T21126 prep of,representative
R15825 T21128 T21130 nummod 2,experiments
R15826 T21129 T21130 amod independent,experiments
R15827 T21130 T21127 pobj experiments,of
R15828 T21131 T21125 punct .,are
R15829 T21132 T21138 punct *,p
R15830 T21133 T21138 ccomp p,p
R15831 T21134 T21135 compound <,0.05
R15832 T21135 T21133 nummod 0.05,p
R15833 T21136 T21138 punct ;,p
R15834 T21137 T21138 punct **,p
R15835 T21138 T21138 ROOT p,p
R15836 T21139 T21140 compound <,0.01
R15837 T21140 T21138 npadvmod 0.01,p
R15838 T21141 T21138 punct .,p

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T21159 513-525 Protein denotes IFNα protein
T21158 504-508 Protein denotes IL-6
T21157 497-502 Protein denotes MCP-1
T21156 490-495 Protein denotes MIP-2
T21155 486-488 Protein denotes KC
T21154 48-58 Negative_regulation denotes deficiency
T21153 44-47 Protein denotes A20
R15839 T21153 T21154 themeOf A20,deficiency

testone

Id Subject Object Predicate Lexical cue
T20767 48-58 Negative_regulation denotes deficiency
T20766 504-508 Protein denotes IL-6
T20765 497-502 Protein denotes MCP-1
T20764 490-495 Protein denotes MIP-2
T20763 486-488 Protein denotes KC