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mutations of the Sharpin (SHANK-associated RH domain-interacting protein, other aliases: Rbckl1, Sipl1) gene in mice result in systemic inflammation that is characterized by chronic proliferative dermatitis and dysregulated secretion of T helper1 (Th1) and Th2 cytokines. The cellular and molecular mechanisms underlying this inflammatory phenotype remain elusive. Dendritic cells may contribute to the initiation and progression of the phenotype of SHARPIN-deficient mice because of their pivotal role in innate and adaptive immunity. Here we show by flow cytometry that SHARPIN- deficiency did not alter the distribution of different DC subtypes in the spleen. In response to TOLL-like receptor (TLR) agonists LPS and poly I:C, cultured bone marrow-derived dendritic cells (BMDC) from WT and mutant mice exhibited similar increases in expression of co-stimulatory molecules CD40, CD80, and CD86. However, stimulated SHARPIN-deficient BMDC had reduced transcription and secretion of pro-inflammatory mediators IL6, IL12P70, GMCSF, and nitric oxide. Mutant BMDC had defective activation of NF-κB signaling, whereas the MAPK1/3 (ERK1/2) and MAPK11/12/13/14 (p38 MAP kinase isoforms) and TBK1 signaling pathways were intact. A mixed lymphocyte reaction showed that mutant BMDC only induced a weak Th1 immune response but stimulated increased Th2 cytokine production from allogeneic naïve CD4+ T cells. In conclusion, loss of Sharpin in mice significantly affects the immune function of DC and this may partially account for the systemic inflammation and Th2-biased immune response.\n"}
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mutations of the Sharpin (SHANK-associated RH domain-interacting protein, other aliases: Rbckl1, Sipl1) gene in mice result in systemic inflammation that is characterized by chronic proliferative dermatitis and dysregulated secretion of T helper1 (Th1) and Th2 cytokines. The cellular and molecular mechanisms underlying this inflammatory phenotype remain elusive. Dendritic cells may contribute to the initiation and progression of the phenotype of SHARPIN-deficient mice because of their pivotal role in innate and adaptive immunity. Here we show by flow cytometry that SHARPIN- deficiency did not alter the distribution of different DC subtypes in the spleen. In response to TOLL-like receptor (TLR) agonists LPS and poly I:C, cultured bone marrow-derived dendritic cells (BMDC) from WT and mutant mice exhibited similar increases in expression of co-stimulatory molecules CD40, CD80, and CD86. However, stimulated SHARPIN-deficient BMDC had reduced transcription and secretion of pro-inflammatory mediators IL6, IL12P70, GMCSF, and nitric oxide. Mutant BMDC had defective activation of NF-κB signaling, whereas the MAPK1/3 (ERK1/2) and MAPK11/12/13/14 (p38 MAP kinase isoforms) and TBK1 signaling pathways were intact. A mixed lymphocyte reaction showed that mutant BMDC only induced a weak Th1 immune response but stimulated increased Th2 cytokine production from allogeneic naïve CD4+ T cells. In conclusion, loss of Sharpin in mice significantly affects the immune function of DC and this may partially account for the systemic inflammation and Th2-biased immune response.\n"}
UBERON-AE
{"project":"UBERON-AE","denotations":[{"id":"T69","span":{"begin":667,"end":673},"obj":"http://purl.obolibrary.org/obo/UBERON_0002106"},{"id":"T70","span":{"begin":751,"end":762},"obj":"http://purl.obolibrary.org/obo/UBERON_0002371"}],"text":"Spontaneous mutations of the Sharpin (SHANK-associated RH domain-interacting protein, other aliases: Rbckl1, Sipl1) gene in mice result in systemic inflammation that is characterized by chronic proliferative dermatitis and dysregulated secretion of T helper1 (Th1) and Th2 cytokines. The cellular and molecular mechanisms underlying this inflammatory phenotype remain elusive. Dendritic cells may contribute to the initiation and progression of the phenotype of SHARPIN-deficient mice because of their pivotal role in innate and adaptive immunity. Here we show by flow cytometry that SHARPIN- deficiency did not alter the distribution of different DC subtypes in the spleen. In response to TOLL-like receptor (TLR) agonists LPS and poly I:C, cultured bone marrow-derived dendritic cells (BMDC) from WT and mutant mice exhibited similar increases in expression of co-stimulatory molecules CD40, CD80, and CD86. However, stimulated SHARPIN-deficient BMDC had reduced transcription and secretion of pro-inflammatory mediators IL6, IL12P70, GMCSF, and nitric oxide. Mutant BMDC had defective activation of NF-κB signaling, whereas the MAPK1/3 (ERK1/2) and MAPK11/12/13/14 (p38 MAP kinase isoforms) and TBK1 signaling pathways were intact. A mixed lymphocyte reaction showed that mutant BMDC only induced a weak Th1 immune response but stimulated increased Th2 cytokine production from allogeneic naïve CD4+ T cells. In conclusion, loss of Sharpin in mice significantly affects the immune function of DC and this may partially account for the systemic inflammation and Th2-biased immune response.\n"}
GO-BP
{"project":"GO-BP","denotations":[{"id":"T700","span":{"begin":1356,"end":1375},"obj":"http://purl.obolibrary.org/obo/GO_0001816"},{"id":"T701","span":{"begin":148,"end":160},"obj":"http://purl.obolibrary.org/obo/GO_0006954"},{"id":"T702","span":{"begin":1547,"end":1559},"obj":"http://purl.obolibrary.org/obo/GO_0006954"},{"id":"T703","span":{"begin":236,"end":245},"obj":"http://purl.obolibrary.org/obo/GO_0046903"},{"id":"T704","span":{"begin":983,"end":992},"obj":"http://purl.obolibrary.org/obo/GO_0046903"},{"id":"T705","span":{"begin":288,"end":296},"obj":"http://purl.obolibrary.org/obo/GO_0007349"},{"id":"T706","span":{"begin":965,"end":978},"obj":"http://purl.obolibrary.org/obo/GO_0006351"},{"id":"T707","span":{"begin":1088,"end":1107},"obj":"http://purl.obolibrary.org/obo/GO_0051092"},{"id":"T708","span":{"begin":1088,"end":1117},"obj":"http://purl.obolibrary.org/obo/GO_1901224"},{"id":"T709","span":{"begin":1102,"end":1117},"obj":"http://purl.obolibrary.org/obo/GO_0038061"},{"id":"T710","span":{"begin":1108,"end":1117},"obj":"http://purl.obolibrary.org/obo/GO_0023052"},{"id":"T711","span":{"begin":1203,"end":1212},"obj":"http://purl.obolibrary.org/obo/GO_0023052"},{"id":"T712","span":{"begin":1140,"end":1144},"obj":"http://purl.obolibrary.org/obo/GO_0004707"},{"id":"T713","span":{"begin":1169,"end":1172},"obj":"http://purl.obolibrary.org/obo/GO_0004707"},{"id":"T714","span":{"begin":1198,"end":1202},"obj":"http://purl.obolibrary.org/obo/GO_0008384"},{"id":"T715","span":{"begin":1203,"end":1221},"obj":"http://purl.obolibrary.org/obo/GO_0007165"},{"id":"T716","span":{"begin":1307,"end":1326},"obj":"http://purl.obolibrary.org/obo/GO_0042088"},{"id":"T717","span":{"begin":1311,"end":1326},"obj":"http://purl.obolibrary.org/obo/GO_0006955"},{"id":"T718","span":{"begin":1575,"end":1590},"obj":"http://purl.obolibrary.org/obo/GO_0006955"},{"id":"T719","span":{"begin":1311,"end":1341},"obj":"http://purl.obolibrary.org/obo/GO_0002922"},{"id":"T720","span":{"begin":1311,"end":1341},"obj":"http://purl.obolibrary.org/obo/GO_0045089"},{"id":"T721","span":{"begin":1311,"end":1341},"obj":"http://purl.obolibrary.org/obo/GO_0050778"},{"id":"T722","span":{"begin":1311,"end":1341},"obj":"http://purl.obolibrary.org/obo/GO_0002821"}],"text":"Spontaneous mutations of the Sharpin (SHANK-associated RH domain-interacting protein, other aliases: Rbckl1, Sipl1) gene in mice result in systemic inflammation that is characterized by chronic proliferative dermatitis and dysregulated secretion of T helper1 (Th1) and Th2 cytokines. The cellular and molecular mechanisms underlying this inflammatory phenotype remain elusive. Dendritic cells may contribute to the initiation and progression of the phenotype of SHARPIN-deficient mice because of their pivotal role in innate and adaptive immunity. Here we show by flow cytometry that SHARPIN- deficiency did not alter the distribution of different DC subtypes in the spleen. In response to TOLL-like receptor (TLR) agonists LPS and poly I:C, cultured bone marrow-derived dendritic cells (BMDC) from WT and mutant mice exhibited similar increases in expression of co-stimulatory molecules CD40, CD80, and CD86. However, stimulated SHARPIN-deficient BMDC had reduced transcription and secretion of pro-inflammatory mediators IL6, IL12P70, GMCSF, and nitric oxide. Mutant BMDC had defective activation of NF-κB signaling, whereas the MAPK1/3 (ERK1/2) and MAPK11/12/13/14 (p38 MAP kinase isoforms) and TBK1 signaling pathways were intact. A mixed lymphocyte reaction showed that mutant BMDC only induced a weak Th1 immune response but stimulated increased Th2 cytokine production from allogeneic naïve CD4+ T cells. In conclusion, loss of Sharpin in mice significantly affects the immune function of DC and this may partially account for the systemic inflammation and Th2-biased immune response.\n"}
GO-MF
{"project":"GO-MF","denotations":[{"id":"T724","span":{"begin":1140,"end":1144},"obj":"http://purl.obolibrary.org/obo/GO_0004707"},{"id":"T725","span":{"begin":1169,"end":1172},"obj":"http://purl.obolibrary.org/obo/GO_0004707"},{"id":"T726","span":{"begin":1198,"end":1202},"obj":"http://purl.obolibrary.org/obo/GO_0008384"}],"text":"Spontaneous mutations of the Sharpin (SHANK-associated RH domain-interacting protein, other aliases: Rbckl1, Sipl1) gene in mice result in systemic inflammation that is characterized by chronic proliferative dermatitis and dysregulated secretion of T helper1 (Th1) and Th2 cytokines. The cellular and molecular mechanisms underlying this inflammatory phenotype remain elusive. Dendritic cells may contribute to the initiation and progression of the phenotype of SHARPIN-deficient mice because of their pivotal role in innate and adaptive immunity. Here we show by flow cytometry that SHARPIN- deficiency did not alter the distribution of different DC subtypes in the spleen. In response to TOLL-like receptor (TLR) agonists LPS and poly I:C, cultured bone marrow-derived dendritic cells (BMDC) from WT and mutant mice exhibited similar increases in expression of co-stimulatory molecules CD40, CD80, and CD86. However, stimulated SHARPIN-deficient BMDC had reduced transcription and secretion of pro-inflammatory mediators IL6, IL12P70, GMCSF, and nitric oxide. Mutant BMDC had defective activation of NF-κB signaling, whereas the MAPK1/3 (ERK1/2) and MAPK11/12/13/14 (p38 MAP kinase isoforms) and TBK1 signaling pathways were intact. A mixed lymphocyte reaction showed that mutant BMDC only induced a weak Th1 immune response but stimulated increased Th2 cytokine production from allogeneic naïve CD4+ T cells. In conclusion, loss of Sharpin in mice significantly affects the immune function of DC and this may partially account for the systemic inflammation and Th2-biased immune response.\n"}
GO-CC
{"project":"GO-CC","denotations":[{"id":"T727","span":{"begin":387,"end":392},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T728","span":{"begin":781,"end":786},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T729","span":{"begin":1405,"end":1410},"obj":"http://purl.obolibrary.org/obo/GO_0005623"}],"text":"Spontaneous mutations of the Sharpin (SHANK-associated RH domain-interacting protein, other aliases: Rbckl1, Sipl1) gene in mice result in systemic inflammation that is characterized by chronic proliferative dermatitis and dysregulated secretion of T helper1 (Th1) and Th2 cytokines. The cellular and molecular mechanisms underlying this inflammatory phenotype remain elusive. Dendritic cells may contribute to the initiation and progression of the phenotype of SHARPIN-deficient mice because of their pivotal role in innate and adaptive immunity. Here we show by flow cytometry that SHARPIN- deficiency did not alter the distribution of different DC subtypes in the spleen. In response to TOLL-like receptor (TLR) agonists LPS and poly I:C, cultured bone marrow-derived dendritic cells (BMDC) from WT and mutant mice exhibited similar increases in expression of co-stimulatory molecules CD40, CD80, and CD86. However, stimulated SHARPIN-deficient BMDC had reduced transcription and secretion of pro-inflammatory mediators IL6, IL12P70, GMCSF, and nitric oxide. Mutant BMDC had defective activation of NF-κB signaling, whereas the MAPK1/3 (ERK1/2) and MAPK11/12/13/14 (p38 MAP kinase isoforms) and TBK1 signaling pathways were intact. A mixed lymphocyte reaction showed that mutant BMDC only induced a weak Th1 immune response but stimulated increased Th2 cytokine production from allogeneic naïve CD4+ T cells. In conclusion, loss of Sharpin in mice significantly affects the immune function of DC and this may partially account for the systemic inflammation and Th2-biased immune response.\n"}
sentences
{"project":"sentences","denotations":[{"id":"T108","span":{"begin":0,"end":100},"obj":"Sentence"},{"id":"T109","span":{"begin":101,"end":283},"obj":"Sentence"},{"id":"T110","span":{"begin":284,"end":376},"obj":"Sentence"},{"id":"T111","span":{"begin":377,"end":547},"obj":"Sentence"},{"id":"T112","span":{"begin":548,"end":674},"obj":"Sentence"},{"id":"T113","span":{"begin":675,"end":909},"obj":"Sentence"},{"id":"T114","span":{"begin":910,"end":1061},"obj":"Sentence"},{"id":"T115","span":{"begin":1062,"end":1234},"obj":"Sentence"},{"id":"T116","span":{"begin":1235,"end":1411},"obj":"Sentence"},{"id":"T117","span":{"begin":1412,"end":1591},"obj":"Sentence"},{"id":"T3","span":{"begin":0,"end":100},"obj":"Sentence"},{"id":"T4","span":{"begin":101,"end":283},"obj":"Sentence"},{"id":"T5","span":{"begin":284,"end":376},"obj":"Sentence"},{"id":"T6","span":{"begin":377,"end":547},"obj":"Sentence"},{"id":"T7","span":{"begin":548,"end":674},"obj":"Sentence"},{"id":"T8","span":{"begin":675,"end":909},"obj":"Sentence"},{"id":"T9","span":{"begin":910,"end":1061},"obj":"Sentence"},{"id":"T10","span":{"begin":1062,"end":1234},"obj":"Sentence"},{"id":"T11","span":{"begin":1235,"end":1411},"obj":"Sentence"},{"id":"T12","span":{"begin":1412,"end":1591},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Spontaneous mutations of the Sharpin (SHANK-associated RH domain-interacting protein, other aliases: Rbckl1, Sipl1) gene in mice result in systemic inflammation that is characterized by chronic proliferative dermatitis and dysregulated secretion of T helper1 (Th1) and Th2 cytokines. The cellular and molecular mechanisms underlying this inflammatory phenotype remain elusive. Dendritic cells may contribute to the initiation and progression of the phenotype of SHARPIN-deficient mice because of their pivotal role in innate and adaptive immunity. Here we show by flow cytometry that SHARPIN- deficiency did not alter the distribution of different DC subtypes in the spleen. In response to TOLL-like receptor (TLR) agonists LPS and poly I:C, cultured bone marrow-derived dendritic cells (BMDC) from WT and mutant mice exhibited similar increases in expression of co-stimulatory molecules CD40, CD80, and CD86. However, stimulated SHARPIN-deficient BMDC had reduced transcription and secretion of pro-inflammatory mediators IL6, IL12P70, GMCSF, and nitric oxide. Mutant BMDC had defective activation of NF-κB signaling, whereas the MAPK1/3 (ERK1/2) and MAPK11/12/13/14 (p38 MAP kinase isoforms) and TBK1 signaling pathways were intact. A mixed lymphocyte reaction showed that mutant BMDC only induced a weak Th1 immune response but stimulated increased Th2 cytokine production from allogeneic naïve CD4+ T cells. In conclusion, loss of Sharpin in mice significantly affects the immune function of DC and this may partially account for the systemic inflammation and Th2-biased immune response.\n"}
ICD10
{"project":"ICD10","denotations":[{"id":"T723","span":{"begin":208,"end":218},"obj":"http://purl.bioontology.org/ontology/ICD10/L30.9"}],"text":"Spontaneous mutations of the Sharpin (SHANK-associated RH domain-interacting protein, other aliases: Rbckl1, Sipl1) gene in mice result in systemic inflammation that is characterized by chronic proliferative dermatitis and dysregulated secretion of T helper1 (Th1) and Th2 cytokines. The cellular and molecular mechanisms underlying this inflammatory phenotype remain elusive. Dendritic cells may contribute to the initiation and progression of the phenotype of SHARPIN-deficient mice because of their pivotal role in innate and adaptive immunity. Here we show by flow cytometry that SHARPIN- deficiency did not alter the distribution of different DC subtypes in the spleen. In response to TOLL-like receptor (TLR) agonists LPS and poly I:C, cultured bone marrow-derived dendritic cells (BMDC) from WT and mutant mice exhibited similar increases in expression of co-stimulatory molecules CD40, CD80, and CD86. However, stimulated SHARPIN-deficient BMDC had reduced transcription and secretion of pro-inflammatory mediators IL6, IL12P70, GMCSF, and nitric oxide. Mutant BMDC had defective activation of NF-κB signaling, whereas the MAPK1/3 (ERK1/2) and MAPK11/12/13/14 (p38 MAP kinase isoforms) and TBK1 signaling pathways were intact. A mixed lymphocyte reaction showed that mutant BMDC only induced a weak Th1 immune response but stimulated increased Th2 cytokine production from allogeneic naïve CD4+ T cells. In conclusion, loss of Sharpin in mice significantly affects the immune function of DC and this may partially account for the systemic inflammation and Th2-biased immune response.\n"}
events-check-again
{"project":"events-check-again","denotations":[{"id":"T831","span":{"begin":1152,"end":1158},"obj":"Protein"},{"id":"T832","span":{"begin":1159,"end":1161},"obj":"Protein"},{"id":"T833","span":{"begin":1162,"end":1164},"obj":"Protein"},{"id":"T834","span":{"begin":1165,"end":1167},"obj":"Protein"},{"id":"T835","span":{"begin":1198,"end":1202},"obj":"Protein"},{"id":"T836","span":{"begin":1427,"end":1431},"obj":"Negative_regulation"},{"id":"T837","span":{"begin":1435,"end":1442},"obj":"Protein"},{"id":"T830","span":{"begin":1145,"end":1146},"obj":"Protein"},{"id":"T803","span":{"begin":12,"end":21},"obj":"Negative_regulation"},{"id":"T804","span":{"begin":29,"end":36},"obj":"Protein"},{"id":"T805","span":{"begin":38,"end":84},"obj":"Protein"},{"id":"T806","span":{"begin":101,"end":107},"obj":"Protein"},{"id":"T807","span":{"begin":109,"end":114},"obj":"Protein"},{"id":"T808","span":{"begin":462,"end":469},"obj":"Protein"},{"id":"T809","span":{"begin":470,"end":479},"obj":"Negative_regulation"},{"id":"T810","span":{"begin":584,"end":591},"obj":"Protein"},{"id":"T811","span":{"begin":593,"end":603},"obj":"Negative_regulation"},{"id":"T812","span":{"begin":888,"end":892},"obj":"Protein"},{"id":"T813","span":{"begin":894,"end":898},"obj":"Protein"},{"id":"T814","span":{"begin":904,"end":908},"obj":"Protein"},{"id":"T815","span":{"begin":930,"end":937},"obj":"Protein"},{"id":"T816","span":{"begin":938,"end":947},"obj":"Negative_regulation"},{"id":"T817","span":{"begin":957,"end":964},"obj":"Negative_regulation"},{"id":"T818","span":{"begin":957,"end":964},"obj":"Negative_regulation"},{"id":"T819","span":{"begin":957,"end":964},"obj":"Negative_regulation"},{"id":"T820","span":{"begin":957,"end":964},"obj":"Negative_regulation"},{"id":"T821","span":{"begin":965,"end":978},"obj":"Transcription"},{"id":"T822","span":{"begin":965,"end":978},"obj":"Transcription"},{"id":"T823","span":{"begin":983,"end":992},"obj":"Gene_expression"},{"id":"T824","span":{"begin":983,"end":992},"obj":"Gene_expression"},{"id":"T825","span":{"begin":1023,"end":1026},"obj":"Protein"},{"id":"T826","span":{"begin":1037,"end":1042},"obj":"Protein"},{"id":"T827","span":{"begin":1131,"end":1136},"obj":"Protein"},{"id":"T828","span":{"begin":1137,"end":1138},"obj":"Protein"},{"id":"T829","span":{"begin":1140,"end":1144},"obj":"Protein"}],"relations":[{"id":"R711","pred":"themeOf","subj":"T826","obj":"T822"},{"id":"R712","pred":"themeOf","subj":"T826","obj":"T823"},{"id":"R713","pred":"equivalentTo","subj":"T829","obj":"T827"},{"id":"R714","pred":"equivalentTo","subj":"T830","obj":"T828"},{"id":"R629","pred":"themeOf","subj":"T837","obj":"T836"},{"id":"R694","pred":"themeOf","subj":"T804","obj":"T803"},{"id":"R695","pred":"equivalentTo","subj":"T805","obj":"T804"},{"id":"R696","pred":"equivalentTo","subj":"T806","obj":"T804"},{"id":"R697","pred":"equivalentTo","subj":"T807","obj":"T804"},{"id":"R698","pred":"themeOf","subj":"T808","obj":"T809"},{"id":"R699","pred":"themeOf","subj":"T810","obj":"T811"},{"id":"R700","pred":"themeOf","subj":"T815","obj":"T816"},{"id":"R701","pred":"causeOf","subj":"T816","obj":"T818"},{"id":"R702","pred":"causeOf","subj":"T816","obj":"T820"},{"id":"R703","pred":"causeOf","subj":"T816","obj":"T819"},{"id":"R704","pred":"causeOf","subj":"T816","obj":"T817"},{"id":"R705","pred":"themeOf","subj":"T821","obj":"T818"},{"id":"R706","pred":"themeOf","subj":"T822","obj":"T820"},{"id":"R707","pred":"themeOf","subj":"T823","obj":"T817"},{"id":"R708","pred":"themeOf","subj":"T824","obj":"T819"},{"id":"R709","pred":"themeOf","subj":"T825","obj":"T821"},{"id":"R710","pred":"themeOf","subj":"T825","obj":"T824"}],"text":"Spontaneous mutations of the Sharpin (SHANK-associated RH domain-interacting protein, other aliases: Rbckl1, Sipl1) gene in mice result in systemic inflammation that is characterized by chronic proliferative dermatitis and dysregulated secretion of T helper1 (Th1) and Th2 cytokines. The cellular and molecular mechanisms underlying this inflammatory phenotype remain elusive. Dendritic cells may contribute to the initiation and progression of the phenotype of SHARPIN-deficient mice because of their pivotal role in innate and adaptive immunity. Here we show by flow cytometry that SHARPIN- deficiency did not alter the distribution of different DC subtypes in the spleen. In response to TOLL-like receptor (TLR) agonists LPS and poly I:C, cultured bone marrow-derived dendritic cells (BMDC) from WT and mutant mice exhibited similar increases in expression of co-stimulatory molecules CD40, CD80, and CD86. However, stimulated SHARPIN-deficient BMDC had reduced transcription and secretion of pro-inflammatory mediators IL6, IL12P70, GMCSF, and nitric oxide. Mutant BMDC had defective activation of NF-κB signaling, whereas the MAPK1/3 (ERK1/2) and MAPK11/12/13/14 (p38 MAP kinase isoforms) and TBK1 signaling pathways were intact. A mixed lymphocyte reaction showed that mutant BMDC only induced a weak Th1 immune response but stimulated increased Th2 cytokine production from allogeneic naïve CD4+ T cells. In conclusion, loss of Sharpin in mice significantly affects the immune function of DC and this may partially account for the systemic inflammation and Th2-biased immune response.\n"}
bionlp-st-ge-2016-reference-tees
{"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T840","span":{"begin":29,"end":36},"obj":"Protein"},{"id":"T841","span":{"begin":38,"end":43},"obj":"Protein"},{"id":"T842","span":{"begin":55,"end":57},"obj":"Protein"},{"id":"T843","span":{"begin":101,"end":107},"obj":"Protein"},{"id":"T844","span":{"begin":109,"end":114},"obj":"Protein"},{"id":"T845","span":{"begin":249,"end":258},"obj":"Protein"},{"id":"T846","span":{"begin":260,"end":263},"obj":"Protein"},{"id":"T847","span":{"begin":12,"end":21},"obj":"Gene_expression"},{"id":"T848","span":{"begin":12,"end":21},"obj":"Gene_expression"},{"id":"T849","span":{"begin":12,"end":21},"obj":"Gene_expression"},{"id":"T850","span":{"begin":12,"end":21},"obj":"Gene_expression"},{"id":"T851","span":{"begin":44,"end":54},"obj":"Gene_expression"},{"id":"T852","span":{"begin":44,"end":54},"obj":"Gene_expression"},{"id":"T853","span":{"begin":44,"end":54},"obj":"Gene_expression"},{"id":"T854","span":{"begin":44,"end":54},"obj":"Gene_expression"},{"id":"T855","span":{"begin":236,"end":245},"obj":"Localization"},{"id":"T856","span":{"begin":236,"end":245},"obj":"Localization"},{"id":"T857","span":{"begin":223,"end":235},"obj":"Regulation"},{"id":"T858","span":{"begin":223,"end":235},"obj":"Regulation"},{"id":"T859","span":{"begin":462,"end":469},"obj":"Protein"},{"id":"T860","span":{"begin":470,"end":479},"obj":"Negative_regulation"},{"id":"T861","span":{"begin":584,"end":591},"obj":"Protein"},{"id":"T862","span":{"begin":593,"end":603},"obj":"Negative_regulation"},{"id":"T863","span":{"begin":690,"end":708},"obj":"Protein"},{"id":"T864","span":{"begin":710,"end":713},"obj":"Protein"},{"id":"T865","span":{"begin":888,"end":892},"obj":"Protein"},{"id":"T866","span":{"begin":894,"end":898},"obj":"Protein"},{"id":"T867","span":{"begin":904,"end":908},"obj":"Protein"},{"id":"T868","span":{"begin":849,"end":859},"obj":"Gene_expression"},{"id":"T869","span":{"begin":849,"end":859},"obj":"Gene_expression"},{"id":"T870","span":{"begin":849,"end":859},"obj":"Gene_expression"},{"id":"T871","span":{"begin":836,"end":845},"obj":"Positive_regulation"},{"id":"T872","span":{"begin":836,"end":845},"obj":"Positive_regulation"},{"id":"T873","span":{"begin":836,"end":845},"obj":"Positive_regulation"},{"id":"T874","span":{"begin":930,"end":937},"obj":"Protein"},{"id":"T875","span":{"begin":1023,"end":1026},"obj":"Protein"},{"id":"T876","span":{"begin":1028,"end":1035},"obj":"Protein"},{"id":"T877","span":{"begin":1037,"end":1042},"obj":"Protein"},{"id":"T878","span":{"begin":938,"end":947},"obj":"Negative_regulation"},{"id":"T879","span":{"begin":965,"end":978},"obj":"Transcription"},{"id":"T880","span":{"begin":965,"end":978},"obj":"Transcription"},{"id":"T881","span":{"begin":965,"end":978},"obj":"Transcription"},{"id":"T882","span":{"begin":983,"end":992},"obj":"Localization"},{"id":"T883","span":{"begin":983,"end":992},"obj":"Localization"},{"id":"T884","span":{"begin":983,"end":992},"obj":"Localization"},{"id":"T885","span":{"begin":957,"end":964},"obj":"Negative_regulation"},{"id":"T886","span":{"begin":957,"end":964},"obj":"Negative_regulation"},{"id":"T887","span":{"begin":957,"end":964},"obj":"Negative_regulation"},{"id":"T888","span":{"begin":1102,"end":1107},"obj":"Protein"},{"id":"T889","span":{"begin":1131,"end":1138},"obj":"Protein"},{"id":"T890","span":{"begin":1140,"end":1144},"obj":"Protein"},{"id":"T891","span":{"begin":1169,"end":1192},"obj":"Protein"},{"id":"T892","span":{"begin":1198,"end":1202},"obj":"Protein"},{"id":"T893","span":{"begin":1088,"end":1098},"obj":"Positive_regulation"},{"id":"T894","span":{"begin":1398,"end":1402},"obj":"Protein"},{"id":"T895","span":{"begin":1435,"end":1442},"obj":"Protein"},{"id":"T896","span":{"begin":1427,"end":1431},"obj":"Negative_regulation"}],"relations":[{"id":"R630","pred":"themeOf","subj":"T840","obj":"T847"},{"id":"R631","pred":"themeOf","subj":"T841","obj":"T851"},{"id":"R632","pred":"themeOf","subj":"T842","obj":"T848"},{"id":"R634","pred":"themeOf","subj":"T843","obj":"T849"},{"id":"R636","pred":"themeOf","subj":"T844","obj":"T850"},{"id":"R633","pred":"themeOf","subj":"T842","obj":"T852"},{"id":"R635","pred":"themeOf","subj":"T843","obj":"T853"},{"id":"R637","pred":"themeOf","subj":"T844","obj":"T854"},{"id":"R638","pred":"themeOf","subj":"T845","obj":"T855"},{"id":"R639","pred":"themeOf","subj":"T846","obj":"T856"},{"id":"R640","pred":"themeOf","subj":"T855","obj":"T857"},{"id":"R641","pred":"themeOf","subj":"T856","obj":"T858"},{"id":"R642","pred":"themeOf","subj":"T859","obj":"T860"},{"id":"R643","pred":"themeOf","subj":"T861","obj":"T862"},{"id":"R644","pred":"themeOf","subj":"T865","obj":"T868"},{"id":"R645","pred":"themeOf","subj":"T866","obj":"T869"},{"id":"R646","pred":"themeOf","subj":"T867","obj":"T870"},{"id":"R647","pred":"themeOf","subj":"T868","obj":"T871"},{"id":"R648","pred":"themeOf","subj":"T869","obj":"T872"},{"id":"R649","pred":"themeOf","subj":"T870","obj":"T873"},{"id":"R650","pre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mutations of the Sharpin (SHANK-associated RH domain-interacting protein, other aliases: Rbckl1, Sipl1) gene in mice result in systemic inflammation that is characterized by chronic proliferative dermatitis and dysregulated secretion of T helper1 (Th1) and Th2 cytokines. The cellular and molecular mechanisms underlying this inflammatory phenotype remain elusive. Dendritic cells may contribute to the initiation and progression of the phenotype of SHARPIN-deficient mice because of their pivotal role in innate and adaptive immunity. Here we show by flow cytometry that SHARPIN- deficiency did not alter the distribution of different DC subtypes in the spleen. In response to TOLL-like receptor (TLR) agonists LPS and poly I:C, cultured bone marrow-derived dendritic cells (BMDC) from WT and mutant mice exhibited similar increases in expression of co-stimulatory molecules CD40, CD80, and CD86. However, stimulated SHARPIN-deficient BMDC had reduced transcription and secretion of pro-inflammatory mediators IL6, IL12P70, GMCSF, and nitric oxide. Mutant BMDC had defective activation of NF-κB signaling, whereas the MAPK1/3 (ERK1/2) and MAPK11/12/13/14 (p38 MAP kinase isoforms) and TBK1 signaling pathways were intact. A mixed lymphocyte reaction showed that mutant BMDC only induced a weak Th1 immune response but stimulated increased Th2 cytokine production from allogeneic naïve CD4+ T cells. In conclusion, loss of Sharpin in mice significantly affects the immune function of DC and this may partially account for the systemic inflammation and Th2-biased immune response.\n"}
bionlp-st-ge-2016-reference
{"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T93","span":{"begin":983,"end":992},"obj":"Gene_expression"},{"id":"T94","span":{"begin":1023,"end":1026},"obj":"Protein"},{"id":"T95","span":{"begin":1037,"end":1042},"obj":"Protein"},{"id":"T96","span":{"begin":1131,"end":1136},"obj":"Protein"},{"id":"T97","span":{"begin":1137,"end":1138},"obj":"Protein"},{"id":"T98","span":{"begin":1140,"end":1144},"obj":"Protein"},{"id":"T99","span":{"begin":1145,"end":1146},"obj":"Protein"},{"id":"T100","span":{"begin":1152,"end":1158},"obj":"Protein"},{"id":"T101","span":{"begin":1159,"end":1161},"obj":"Protein"},{"id":"T102","span":{"begin":1162,"end":1164},"obj":"Protein"},{"id":"T103","span":{"begin":1165,"end":1167},"obj":"Protein"},{"id":"T104","span":{"begin":1198,"end":1202},"obj":"Protein"},{"id":"T105","span":{"begin":1427,"end":1431},"obj":"Negative_regulation"},{"id":"T106","span":{"begin":1435,"end":1442},"obj":"Protein"},{"id":"T72","span":{"begin":12,"end":21},"obj":"Negative_regulation"},{"id":"T73","span":{"begin":29,"end":36},"obj":"Protein"},{"id":"T74","span":{"begin":38,"end":84},"obj":"Protein"},{"id":"T75","span":{"begin":101,"end":107},"obj":"Protein"},{"id":"T76","span":{"begin":109,"end":114},"obj":"Protein"},{"id":"T77","span":{"begin":462,"end":469},"obj":"Protein"},{"id":"T78","span":{"begin":470,"end":479},"obj":"Negative_regulation"},{"id":"T79","span":{"begin":584,"end":591},"obj":"Protein"},{"id":"T80","span":{"begin":593,"end":603},"obj":"Negative_regulation"},{"id":"T81","span":{"begin":888,"end":892},"obj":"Protein"},{"id":"T82","span":{"begin":894,"end":898},"obj":"Protein"},{"id":"T83","span":{"begin":904,"end":908},"obj":"Protein"},{"id":"T84","span":{"begin":930,"end":937},"obj":"Protein"},{"id":"T85","span":{"begin":938,"end":947},"obj":"Negative_regulation"},{"id":"T86","span":{"begin":957,"end":964},"obj":"Negative_regulation"},{"id":"T87","span":{"begin":957,"end":964},"obj":"Negative_regulation"},{"id":"T88","span":{"begin":957,"end":964},"obj":"Negative_regulation"},{"id":"T89","span":{"begin":957,"end":964},"obj":"Negative_regulation"},{"id":"T90","span":{"begin":965,"end":978},"obj":"Transcription"},{"id":"T91","span":{"begin":965,"end":978},"obj":"Transcription"},{"id":"T92","span":{"begin":983,"end":992},"obj":"Gene_expression"}],"relations":[{"id":"R36","pred":"themeOf","subj":"T94","obj":"T90"},{"id":"R37","pred":"themeOf","subj":"T94","obj":"T93"},{"id":"R38","pred":"themeOf","subj":"T95","obj":"T91"},{"id":"R672","pred":"equivalentTo","subj":"T74","obj":"T73"},{"id":"R674","pred":"equivalentTo","subj":"T76","obj":"T73"},{"id":"R678","pred":"causeOf","subj":"T85","obj":"T87"},{"id":"R679","pred":"causeOf","subj":"T85","obj":"T89"},{"id":"R680","pred":"causeOf","subj":"T85","obj":"T88"},{"id":"R681","pred":"causeOf","subj":"T85","obj":"T86"},{"id":"R682","pred":"themeOf","subj":"T90","obj":"T87"},{"id":"R683","pred":"themeOf","subj":"T91","obj":"T89"},{"id":"R684","pred":"themeOf","subj":"T92","obj":"T86"},{"id":"R35","pred":"themeOf","subj":"T93","obj":"T88"},{"id":"R677","pred":"themeOf","subj":"T84","obj":"T85"},{"id":"R39","pred":"themeOf","subj":"T95","obj":"T92"},{"id":"R40","pred":"equivalentTo","subj":"T98","obj":"T96"},{"id":"R41","pred":"equivalentTo","subj":"T99","obj":"T97"},{"id":"R42","pred":"themeOf","subj":"T106","obj":"T105"},{"id":"R671","pred":"themeOf","subj":"T73","obj":"T72"},{"id":"R673","pred":"equivalentTo","subj":"T75","obj":"T73"},{"id":"R675","pred":"themeOf","subj":"T77","obj":"T78"},{"id":"R676","pred":"themeOf","subj":"T79","obj":"T80"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"Spontaneous mutations of the Sharpin (SHANK-associated RH domain-interacting protein, other aliases: Rbckl1, Sipl1) gene in mice result in systemic inflammation that is characterized by chronic proliferative dermatitis and dysregulated secretion of T helper1 (Th1) and Th2 cytokines. The cellular and molecular mechanisms underlying this inflammatory phenotype remain elusive. Dendritic cells may contribute to the initiation and progression of the phenotype of SHARPIN-deficient mice because of their pivotal role in innate and adaptive immunity. Here we show by flow cytometry that SHARPIN- deficiency did not alter the distribution of different DC subtypes in the spleen. In response to TOLL-like receptor (TLR) agonists LPS and poly I:C, cultured bone marrow-derived dendritic cells (BMDC) from WT and mutant mice exhibited similar increases in expression of co-stimulatory molecules CD40, CD80, and CD86. However, stimulated SHARPIN-deficient BMDC had reduced transcription and secretion of pro-inflammatory mediators IL6, IL12P70, GMCSF, and nitric oxide. Mutant BMDC had defective activation of NF-κB signaling, whereas the MAPK1/3 (ERK1/2) and MAPK11/12/13/14 (p38 MAP kinase isoforms) and TBK1 signaling pathways were intact. A mixed lymphocyte reaction showed that mutant BMDC only induced a weak Th1 immune response but stimulated increased Th2 cytokine production from allogeneic naïve CD4+ T cells. In conclusion, loss of Sharpin in mice significantly affects the immune function of DC and this may partially account for the systemic inflammation and Th2-biased immune response.\n"}
bionlp-st-ge-2016-uniprot
{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T668","span":{"begin":29,"end":36},"obj":"Q9H0F6"},{"id":"T669","span":{"begin":109,"end":114},"obj":"Q9H0F6"},{"id":"T670","span":{"begin":462,"end":469},"obj":"Q9H0F6"},{"id":"T671","span":{"begin":584,"end":591},"obj":"Q9H0F6"},{"id":"T672","span":{"begin":888,"end":892},"obj":"P25942"},{"id":"T673","span":{"begin":894,"end":898},"obj":"P33681"},{"id":"T674","span":{"begin":904,"end":908},"obj":"P42081"},{"id":"T675","span":{"begin":930,"end":937},"obj":"Q9H0F6"},{"id":"T676","span":{"begin":1023,"end":1026},"obj":"P05231"},{"id":"T677","span":{"begin":1037,"end":1042},"obj":"P04141"},{"id":"T678","span":{"begin":1131,"end":1136},"obj":"P28482"},{"id":"T679","span":{"begin":1140,"end":1144},"obj":"P27361"},{"id":"T680","span":{"begin":1152,"end":1158},"obj":"Q15759"},{"id":"T681","span":{"begin":1169,"end":1172},"obj":"P53778"},{"id":"T682","span":{"begin":1169,"end":1172},"obj":"Q16539"},{"id":"T683","span":{"begin":1169,"end":1172},"obj":"Q15759"},{"id":"T684","span":{"begin":1169,"end":1172},"obj":"O15264"},{"id":"T685","span":{"begin":1198,"end":1202},"obj":"Q9UHD2"},{"id":"T686","span":{"begin":1398,"end":1401},"obj":"P01730"},{"id":"T687","span":{"begin":1435,"end":1442},"obj":"Q9H0F6"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"Spontaneous mutations of the Sharpin (SHANK-associated RH domain-interacting protein, other aliases: Rbckl1, Sipl1) gene in mice result in systemic inflammation that is characterized by chronic proliferative dermatitis and dysregulated secretion of T helper1 (Th1) and Th2 cytokines. The cellular and molecular mechanisms underlying this inflammatory phenotype remain elusive. Dendritic cells may contribute to the initiation and progression of the phenotype of SHARPIN-deficient mice because of their pivotal role in innate and adaptive immunity. Here we show by flow cytometry that SHARPIN- deficiency did not alter the distribution of different DC subtypes in the spleen. In response to TOLL-like receptor (TLR) agonists LPS and poly I:C, cultured bone marrow-derived dendritic cells (BMDC) from WT and mutant mice exhibited similar increases in expression of co-stimulatory molecules CD40, CD80, and CD86. However, stimulated SHARPIN-deficient BMDC had reduced transcription and secretion of pro-inflammatory mediators IL6, IL12P70, GMCSF, and nitric oxide. Mutant BMDC had defective activation of NF-κB signaling, whereas the MAPK1/3 (ERK1/2) and MAPK11/12/13/14 (p38 MAP kinase isoforms) and TBK1 signaling pathways were intact. A mixed lymphocyte reaction showed that mutant BMDC only induced a weak Th1 immune response but stimulated increased Th2 cytokine production from allogeneic naïve CD4+ T cells. In conclusion, loss of Sharpin in mice significantly affects the immune function of DC and this may partially account for the systemic inflammation and Th2-biased immune response.\n"}
test2
{"project":"test2","denotations":[{"id":"T50","span":{"begin":894,"end":898},"obj":"Protein"},{"id":"T51","span":{"begin":904,"end":908},"obj":"Protein"},{"id":"T52","span":{"begin":930,"end":937},"obj":"Protein"},{"id":"T53","span":{"begin":938,"end":947},"obj":"Negative_regulation"},{"id":"T54","span":{"begin":957,"end":964},"obj":"Negative_regulation"},{"id":"T55","span":{"begin":965,"end":978},"obj":"Transcription"},{"id":"T56","span":{"begin":1023,"end":1026},"obj":"Protein"},{"id":"T57","span":{"begin":1037,"end":1042},"obj":"Protein"},{"id":"T58","span":{"begin":1131,"end":1136},"obj":"Protein"},{"id":"T59","span":{"begin":1137,"end":1138},"obj":"Protein"},{"id":"T60","span":{"begin":1140,"end":1144},"obj":"Protein"},{"id":"T61","span":{"begin":1145,"end":1146},"obj":"Protein"},{"id":"T62","span":{"begin":1152,"end":1158},"obj":"Protein"},{"id":"T63","span":{"begin":1159,"end":1161},"obj":"Protein"},{"id":"T64","span":{"begin":1162,"end":1164},"obj":"Protein"},{"id":"T65","span":{"begin":1165,"end":1167},"obj":"Protein"},{"id":"T66","span":{"begin":1198,"end":1202},"obj":"Protein"},{"id":"T67","span":{"begin":1427,"end":1431},"obj":"Negative_regulation"},{"id":"T68","span":{"begin":1435,"end":1442},"obj":"Protein"},{"id":"T38","span":{"begin":12,"end":21},"obj":"Negative_regulation"},{"id":"T39","span":{"begin":29,"end":36},"obj":"Protein"},{"id":"T40","span":{"begin":38,"end":84},"obj":"Protein"},{"id":"T41","span":{"begin":101,"end":107},"obj":"Protein"},{"id":"T42","span":{"begin":109,"end":114},"obj":"Protein"},{"id":"T43","span":{"begin":462,"end":469},"obj":"Protein"},{"id":"T44","span":{"begin":470,"end":479},"obj":"Negative_regulation"},{"id":"T45","span":{"begin":584,"end":591},"obj":"Protein"},{"id":"T46","span":{"begin":593,"end":603},"obj":"Negative_regulation"},{"id":"T47","span":{"begin":836,"end":845},"obj":"Positive_regulation"},{"id":"T48","span":{"begin":849,"end":859},"obj":"Gene_expression"},{"id":"T49","span":{"begin":888,"end":892},"obj":"Protein"}],"relations":[{"id":"R662","pred":"themeOf","subj":"T39","obj":"T38"},{"id":"R663","pred":"equivalentTo","subj":"T40","obj":"T39"},{"id":"R664","pred":"equivalentTo","subj":"T41","obj":"T39"},{"id":"R665","pred":"themeOf","subj":"T42","obj":"T38"},{"id":"R666","pred":"equivalentTo","subj":"T42","obj":"T39"},{"id":"R667","pred":"themeOf","subj":"T43","obj":"T44"},{"id":"R668","pred":"themeOf","subj":"T45","obj":"T46"},{"id":"R669","pred":"themeOf","subj":"T48","obj":"T47"},{"id":"R670","pred":"themeOf","subj":"T49","obj":"T48"},{"id":"R23","pred":"themeOf","subj":"T50","obj":"T48"},{"id":"R24","pred":"themeOf","subj":"T51","obj":"T48"},{"id":"R25","pred":"themeOf","subj":"T52","obj":"T53"},{"id":"R26","pred":"causeOf","subj":"T53","obj":"T54"},{"id":"R27","pred":"themeOf","subj":"T55","obj":"T54"},{"id":"R28","pred":"themeOf","subj":"T56","obj":"T55"},{"id":"R29","pred":"themeOf","subj":"T57","obj":"T55"},{"id":"R30","pred":"equivalentTo","subj":"T60","obj":"T58"},{"id":"R31","pred":"equivalentTo","subj":"T60","obj":"T59"},{"id":"R32","pred":"equivalentTo","subj":"T61","obj":"T59"},{"id":"R33","pred":"equivalentTo","subj":"T61","obj":"T58"},{"id":"R34","pred":"themeOf","subj":"T68","obj":"T67"}],"text":"Spontaneous mutations of the Sharpin (SHANK-associated RH domain-interacting protein, other aliases: Rbckl1, Sipl1) gene in mice result in systemic inflammation that is characterized by chronic proliferative dermatitis and dysregulated secretion of T helper1 (Th1) and Th2 cytokines. The cellular and molecular mechanisms underlying this inflammatory phenotype remain elusive. Dendritic cells may contribute to the initiation and progression of the phenotype of SHARPIN-deficient mice because of their pivotal role in innate and adaptive immunity. Here we show by flow cytometry that SHARPIN- deficiency did not alter the distribution of different DC subtypes in the spleen. In response to TOLL-like receptor (TLR) agonists LPS and poly I:C, cultured bone marrow-derived dendritic cells (BMDC) from WT and mutant mice exhibited similar increases in expression of co-stimulatory molecules CD40, CD80, and CD86. However, stimulated SHARPIN-deficient BMDC had reduced transcription and secretion of pro-inflammatory mediators IL6, IL12P70, GMCSF, and nitric oxide. Mutant BMDC had defective activation of NF-κB signaling, whereas the MAPK1/3 (ERK1/2) and MAPK11/12/13/14 (p38 MAP kinase isoforms) and TBK1 signaling pathways were intact. A mixed lymphocyte reaction showed that mutant BMDC only induced a weak Th1 immune response but stimulated increased Th2 cytokine production from allogeneic naïve CD4+ T cells. In conclusion, loss of Sharpin in mice significantly affects the immune function of DC and this may partially account for the systemic inflammation and Th2-biased immune response.\n"}