PMC:3279418 / 1017-1138
Annnotations
pmc-enju-pas
{"project":"pmc-enju-pas","denotations":[{"id":"T552","span":{"begin":8,"end":10},"obj":"IN"},{"id":"T553","span":{"begin":11,"end":25},"obj":"JJ"},{"id":"T554","span":{"begin":26,"end":35},"obj":"NN"},{"id":"T555","span":{"begin":36,"end":40},"obj":"NN"},{"id":"T556","span":{"begin":40,"end":41},"obj":"-COMMA-"},{"id":"T557","span":{"begin":42,"end":46},"obj":"NN"},{"id":"T558","span":{"begin":46,"end":47},"obj":"-COMMA-"},{"id":"T559","span":{"begin":48,"end":51},"obj":"CC"},{"id":"T560","span":{"begin":52,"end":56},"obj":"NN"},{"id":"T561","span":{"begin":58,"end":65},"obj":"RB"},{"id":"T562","span":{"begin":65,"end":66},"obj":"-COMMA-"},{"id":"T563","span":{"begin":67,"end":77},"obj":"VB"},{"id":"T564","span":{"begin":78,"end":95},"obj":"JJ"},{"id":"T565","span":{"begin":96,"end":100},"obj":"NN"},{"id":"T566","span":{"begin":101,"end":104},"obj":"VB"},{"id":"T567","span":{"begin":105,"end":112},"obj":"VB"}],"relations":[{"id":"R471","pred":"arg1Of","subj":"T555","obj":"T556"},{"id":"R472","pred":"arg1Of","subj":"T556","obj":"T559"},{"id":"R473","pred":"arg2Of","subj":"T557","obj":"T556"},{"id":"R474","pred":"arg2Of","subj":"T559","obj":"T552"},{"id":"R475","pred":"arg1Of","subj":"T559","obj":"T553"},{"id":"R476","pred":"arg1Of","subj":"T559","obj":"T554"},{"id":"R477","pred":"arg1Of","subj":"T559","obj":"T558"},{"id":"R478","pred":"arg2Of","subj":"T560","obj":"T559"},{"id":"R479","pred":"arg1Of","subj":"T565","obj":"T563"},{"id":"R480","pred":"arg1Of","subj":"T565","obj":"T564"},{"id":"R481","pred":"arg1Of","subj":"T565","obj":"T566"},{"id":"R482","pred":"arg1Of","subj":"T565","obj":"T567"},{"id":"R483","pred":"arg1Of","subj":"T567","obj":"T561"},{"id":"R484","pred":"arg1Of","subj":"T567","obj":"T562"},{"id":"R485","pred":"arg2Of","subj":"T567","obj":"T566"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"ression of co-stimulatory molecules CD40, CD80, and CD86. However, stimulated SHARPIN-deficient BMDC had reduced transcri"}
bionlp-st-ge-2016-spacy-parsed
{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T276","span":{"begin":8,"end":10},"obj":"IN"},{"id":"T277","span":{"begin":11,"end":25},"obj":"JJ"},{"id":"T278","span":{"begin":26,"end":35},"obj":"NNS"},{"id":"T279","span":{"begin":36,"end":40},"obj":"NNP"},{"id":"T280","span":{"begin":40,"end":41},"obj":","},{"id":"T281","span":{"begin":42,"end":46},"obj":"NNP"},{"id":"T282","span":{"begin":46,"end":47},"obj":","},{"id":"T283","span":{"begin":48,"end":51},"obj":"CC"},{"id":"T284","span":{"begin":52,"end":56},"obj":"NNP"},{"id":"T285","span":{"begin":56,"end":57},"obj":"."},{"id":"T286","span":{"begin":58,"end":65},"obj":"RB"},{"id":"T287","span":{"begin":65,"end":66},"obj":","},{"id":"T288","span":{"begin":67,"end":77},"obj":"VBD"},{"id":"T289","span":{"begin":78,"end":95},"obj":"JJ"},{"id":"T290","span":{"begin":96,"end":100},"obj":"NNP"},{"id":"T291","span":{"begin":101,"end":104},"obj":"VBD"},{"id":"T292","span":{"begin":105,"end":112},"obj":"VBN"}],"relations":[{"id":"R193","pred":"amod","subj":"T277","obj":"T278"},{"id":"R194","pred":"pobj","subj":"T278","obj":"T276"},{"id":"R196","pred":"punct","subj":"T280","obj":"T279"},{"id":"R197","pred":"conj","subj":"T281","obj":"T279"},{"id":"R198","pred":"punct","subj":"T282","obj":"T281"},{"id":"R199","pred":"cc","subj":"T283","obj":"T281"},{"id":"R200","pred":"conj","subj":"T284","obj":"T281"},{"id":"R202","pred":"advmod","subj":"T286","obj":"T288"},{"id":"R203","pred":"punct","subj":"T287","obj":"T288"},{"id":"R204","pred":"ROOT","subj":"T288","obj":"T288"},{"id":"R205","pred":"compound","subj":"T289","obj":"T290"},{"id":"R206","pred":"nsubj","subj":"T290","obj":"T292"},{"id":"R207","pred":"aux","subj":"T291","obj":"T292"},{"id":"R208","pred":"ccomp","subj":"T292","obj":"T288"}],"text":"ression of co-stimulatory molecules CD40, CD80, and CD86. However, stimulated SHARPIN-deficient BMDC had reduced transcri"}
events-check-again
{"project":"events-check-again","denotations":[{"id":"T812","span":{"begin":36,"end":40},"obj":"Protein"},{"id":"T813","span":{"begin":42,"end":46},"obj":"Protein"},{"id":"T814","span":{"begin":52,"end":56},"obj":"Protein"},{"id":"T815","span":{"begin":78,"end":85},"obj":"Protein"},{"id":"T816","span":{"begin":86,"end":95},"obj":"Negative_regulation"},{"id":"T817","span":{"begin":105,"end":112},"obj":"Negative_regulation"},{"id":"T818","span":{"begin":105,"end":112},"obj":"Negative_regulation"},{"id":"T819","span":{"begin":105,"end":112},"obj":"Negative_regulation"},{"id":"T820","span":{"begin":105,"end":112},"obj":"Negative_regulation"}],"relations":[{"id":"R700","pred":"themeOf","subj":"T815","obj":"T816"},{"id":"R701","pred":"causeOf","subj":"T816","obj":"T818"},{"id":"R702","pred":"causeOf","subj":"T816","obj":"T820"},{"id":"R703","pred":"causeOf","subj":"T816","obj":"T819"},{"id":"R704","pred":"causeOf","subj":"T816","obj":"T817"}],"text":"ression of co-stimulatory molecules CD40, CD80, and CD86. However, stimulated SHARPIN-deficient BMDC had reduced transcri"}
bionlp-st-ge-2016-reference-tees
{"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T865","span":{"begin":36,"end":40},"obj":"Protein"},{"id":"T866","span":{"begin":42,"end":46},"obj":"Protein"},{"id":"T867","span":{"begin":52,"end":56},"obj":"Protein"},{"id":"T874","span":{"begin":78,"end":85},"obj":"Protein"},{"id":"T878","span":{"begin":86,"end":95},"obj":"Negative_regulation"},{"id":"T885","span":{"begin":105,"end":112},"obj":"Negative_regulation"},{"id":"T886","span":{"begin":105,"end":112},"obj":"Negative_regulation"},{"id":"T887","span":{"begin":105,"end":112},"obj":"Negative_regulation"}],"relations":[{"id":"R650","pred":"themeOf","subj":"T874","obj":"T878"}],"text":"ression of co-stimulatory molecules CD40, CD80, and CD86. However, stimulated SHARPIN-deficient BMDC had reduced transcri"}
bionlp-st-ge-2016-reference
{"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T81","span":{"begin":36,"end":40},"obj":"Protein"},{"id":"T82","span":{"begin":42,"end":46},"obj":"Protein"},{"id":"T83","span":{"begin":52,"end":56},"obj":"Protein"},{"id":"T84","span":{"begin":78,"end":85},"obj":"Protein"},{"id":"T85","span":{"begin":86,"end":95},"obj":"Negative_regulation"},{"id":"T86","span":{"begin":105,"end":112},"obj":"Negative_regulation"},{"id":"T87","span":{"begin":105,"end":112},"obj":"Negative_regulation"},{"id":"T88","span":{"begin":105,"end":112},"obj":"Negative_regulation"},{"id":"T89","span":{"begin":105,"end":112},"obj":"Negative_regulation"}],"relations":[{"id":"R678","pred":"causeOf","subj":"T85","obj":"T87"},{"id":"R679","pred":"causeOf","subj":"T85","obj":"T89"},{"id":"R680","pred":"causeOf","subj":"T85","obj":"T88"},{"id":"R681","pred":"causeOf","subj":"T85","obj":"T86"},{"id":"R677","pred":"themeOf","subj":"T84","obj":"T85"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"ression of co-stimulatory molecules CD40, CD80, and CD86. However, stimulated SHARPIN-deficient BMDC had reduced transcri"}
bionlp-st-ge-2016-uniprot
{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T672","span":{"begin":36,"end":40},"obj":"P25942"},{"id":"T673","span":{"begin":42,"end":46},"obj":"P33681"},{"id":"T674","span":{"begin":52,"end":56},"obj":"P42081"},{"id":"T675","span":{"begin":78,"end":85},"obj":"Q9H0F6"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"ression of co-stimulatory molecules CD40, CD80, and CD86. However, stimulated SHARPIN-deficient BMDC had reduced transcri"}
test2
{"project":"test2","denotations":[{"id":"T50","span":{"begin":42,"end":46},"obj":"Protein"},{"id":"T51","span":{"begin":52,"end":56},"obj":"Protein"},{"id":"T52","span":{"begin":78,"end":85},"obj":"Protein"},{"id":"T53","span":{"begin":86,"end":95},"obj":"Negative_regulation"},{"id":"T54","span":{"begin":105,"end":112},"obj":"Negative_regulation"},{"id":"T49","span":{"begin":36,"end":40},"obj":"Protein"}],"relations":[{"id":"R25","pred":"themeOf","subj":"T52","obj":"T53"},{"id":"R26","pred":"causeOf","subj":"T53","obj":"T54"}],"text":"ression of co-stimulatory molecules CD40, CD80, and CD86. However, stimulated SHARPIN-deficient BMDC had reduced transcri"}