PMC:3218875 / 10981-11045
Annnotations
testone
{"project":"testone","denotations":[{"id":"T3871","span":{"begin":25,"end":64},"obj":"Protein"}],"text":"the E3 ubiquitin ligases TNF receptor-associated factor (TRAF) 2"}
bionlp-st-ge-2016-spacy-parsed
{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T6249","span":{"begin":63,"end":64},"obj":"CD"},{"id":"T6248","span":{"begin":61,"end":62},"obj":"-RRB-"},{"id":"T6247","span":{"begin":57,"end":61},"obj":"NNP"},{"id":"T6246","span":{"begin":56,"end":57},"obj":"-LRB-"},{"id":"T6245","span":{"begin":49,"end":55},"obj":"NN"},{"id":"T6244","span":{"begin":29,"end":48},"obj":"JJ"},{"id":"T6243","span":{"begin":25,"end":28},"obj":"NNP"},{"id":"T6242","span":{"begin":17,"end":24},"obj":"VBZ"},{"id":"T6241","span":{"begin":7,"end":16},"obj":"NN"},{"id":"T6240","span":{"begin":4,"end":6},"obj":"CD"},{"id":"T6239","span":{"begin":0,"end":3},"obj":"DT"}],"relations":[{"id":"R4253","pred":"det","subj":"T6239","obj":"T6245"},{"id":"R4254","pred":"nummod","subj":"T6240","obj":"T6241"},{"id":"R4256","pred":"nsubj","subj":"T6241","obj":"T6242"},{"id":"R4257","pred":"nmod","subj":"T6242","obj":"T6245"},{"id":"R4258","pred":"nmod","subj":"T6243","obj":"T6245"},{"id":"R4260","pred":"amod","subj":"T6244","obj":"T6245"},{"id":"R4263","pred":"punct","subj":"T6246","obj":"T6247"},{"id":"R4264","pred":"appos","subj":"T6247","obj":"T6245"},{"id":"R4269","pred":"punct","subj":"T6248","obj":"T6247"},{"id":"R4270","pred":"nummod","subj":"T6249","obj":"T6247"}],"text":"the E3 ubiquitin ligases TNF receptor-associated factor (TRAF) 2"}
DLUT931
{"project":"DLUT931","denotations":[{"id":"T7115","span":{"begin":25,"end":64},"obj":"Protein"}],"text":"the E3 ubiquitin ligases TNF receptor-associated factor (TRAF) 2"}
bionlp-st-ge-2016-uniprot
{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T6880","span":{"begin":25,"end":28},"obj":"http://www.uniprot.org/uniprot/P01375"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"the E3 ubiquitin ligases TNF receptor-associated factor (TRAF) 2"}
bionlp-st-ge-2016-test-proteins
{"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T4492","span":{"begin":25,"end":64},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"the E3 ubiquitin ligases TNF receptor-associated factor (TRAF) 2"}
bionlp-st-ge-2016-coref
{"project":"bionlp-st-ge-2016-coref","denotations":[{"id":"T4451","span":{"begin":25,"end":64},"obj":"Antecedent"}],"namespaces":[{"prefix":"_base","uri":"https://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"the E3 ubiquitin ligases TNF receptor-associated factor (TRAF) 2"}
pmc-enju-pas
{"project":"pmc-enju-pas","denotations":[{"id":"T4895","span":{"begin":63,"end":64},"obj":"CD"},{"id":"T4894","span":{"begin":61,"end":62},"obj":"-RRB-"},{"id":"T4893","span":{"begin":57,"end":61},"obj":"NN"},{"id":"T4892","span":{"begin":56,"end":57},"obj":"-LRB-"},{"id":"T4891","span":{"begin":49,"end":55},"obj":"NN"},{"id":"T4890","span":{"begin":29,"end":48},"obj":"JJ"},{"id":"T4889","span":{"begin":25,"end":28},"obj":"NN"},{"id":"T4888","span":{"begin":17,"end":24},"obj":"NN"},{"id":"T4887","span":{"begin":7,"end":16},"obj":"NN"},{"id":"T4886","span":{"begin":4,"end":6},"obj":"NN"},{"id":"T4885","span":{"begin":0,"end":3},"obj":"DT"}],"relations":[{"id":"R3349","pred":"arg1Of","subj":"T4891","obj":"T4885"},{"id":"R3350","pred":"arg1Of","subj":"T4891","obj":"T4886"},{"id":"R3351","pred":"arg1Of","subj":"T4891","obj":"T4887"},{"id":"R3352","pred":"arg1Of","subj":"T4891","obj":"T4888"},{"id":"R3353","pred":"arg1Of","subj":"T4891","obj":"T4889"},{"id":"R3354","pred":"arg1Of","subj":"T4891","obj":"T4890"},{"id":"R3355","pred":"arg1Of","subj":"T4891","obj":"T4892"},{"id":"R3356","pred":"arg1Of","subj":"T4891","obj":"T4895"},{"id":"R3357","pred":"arg2Of","subj":"T4893","obj":"T4892"},{"id":"R3358","pred":"arg3Of","subj":"T4894","obj":"T4892"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"the E3 ubiquitin ligases TNF receptor-associated factor (TRAF) 2"}
GO-BP
{"project":"GO-BP","denotations":[{"id":"T5564","span":{"begin":4,"end":6},"obj":"http://purl.obolibrary.org/obo/GO_0061667"},{"id":"T5561","span":{"begin":4,"end":6},"obj":"http://purl.obolibrary.org/obo/GO_0061666"},{"id":"T5558","span":{"begin":4,"end":6},"obj":"http://purl.obolibrary.org/obo/GO_0061665"},{"id":"T5555","span":{"begin":4,"end":6},"obj":"http://purl.obolibrary.org/obo/GO_0061664"},{"id":"T5552","span":{"begin":4,"end":6},"obj":"http://purl.obolibrary.org/obo/GO_0061663"},{"id":"T5549","span":{"begin":4,"end":6},"obj":"http://purl.obolibrary.org/obo/GO_0061662"},{"id":"T5546","span":{"begin":4,"end":6},"obj":"http://purl.obolibrary.org/obo/GO_0061661"},{"id":"T5543","span":{"begin":4,"end":6},"obj":"http://purl.obolibrary.org/obo/GO_0061660"},{"id":"T5540","span":{"begin":4,"end":6},"obj":"http://purl.obolibrary.org/obo/GO_0061659"},{"id":"T5537","span":{"begin":4,"end":6},"obj":"http://purl.obolibrary.org/obo/GO_0061630"},{"id":"T5534","span":{"begin":4,"end":6},"obj":"http://purl.obolibrary.org/obo/GO_0019787"},{"id":"T5531","span":{"begin":4,"end":6},"obj":"http://purl.obolibrary.org/obo/GO_0004842"}],"text":"the E3 ubiquitin ligases TNF receptor-associated factor (TRAF) 2"}
GO-MF
{"project":"GO-MF","denotations":[{"id":"T5630","span":{"begin":4,"end":6},"obj":"http://purl.obolibrary.org/obo/GO_0061660"},{"id":"T5627","span":{"begin":4,"end":6},"obj":"http://purl.obolibrary.org/obo/GO_0061659"},{"id":"T5624","span":{"begin":4,"end":6},"obj":"http://purl.obolibrary.org/obo/GO_0061630"},{"id":"T5621","span":{"begin":4,"end":6},"obj":"http://purl.obolibrary.org/obo/GO_0019787"},{"id":"T5618","span":{"begin":4,"end":6},"obj":"http://purl.obolibrary.org/obo/GO_0004842"},{"id":"T5654","span":{"begin":7,"end":16},"obj":"http://purl.obolibrary.org/obo/GO_0031386"},{"id":"T5651","span":{"begin":4,"end":6},"obj":"http://purl.obolibrary.org/obo/GO_0061667"},{"id":"T5648","span":{"begin":4,"end":6},"obj":"http://purl.obolibrary.org/obo/GO_0061666"},{"id":"T5645","span":{"begin":4,"end":6},"obj":"http://purl.obolibrary.org/obo/GO_0061665"},{"id":"T5642","span":{"begin":4,"end":6},"obj":"http://purl.obolibrary.org/obo/GO_0061664"},{"id":"T5639","span":{"begin":4,"end":6},"obj":"http://purl.obolibrary.org/obo/GO_0061663"},{"id":"T5636","span":{"begin":4,"end":6},"obj":"http://purl.obolibrary.org/obo/GO_0061662"},{"id":"T5633","span":{"begin":4,"end":6},"obj":"http://purl.obolibrary.org/obo/GO_0061661"}],"text":"the E3 ubiquitin ligases TNF receptor-associated factor (TRAF) 2"}
simple1
{"project":"simple1","denotations":[{"id":"T5821","span":{"begin":25,"end":64},"obj":"Protein"}],"text":"the E3 ubiquitin ligases TNF receptor-associated factor (TRAF) 2"}
BioNLP16_DUT
{"project":"BioNLP16_DUT","denotations":[{"id":"T7850","span":{"begin":25,"end":64},"obj":"Protein"}],"text":"the E3 ubiquitin ligases TNF receptor-associated factor (TRAF) 2"}
BioNLP16_Messiy
{"project":"BioNLP16_Messiy","denotations":[{"id":"T6973","span":{"begin":25,"end":64},"obj":"Protein"}],"text":"the E3 ubiquitin ligases TNF receptor-associated factor (TRAF) 2"}
bionlp-st-ge-2016-test-ihmc
{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T8126","span":{"begin":7,"end":16},"obj":"Protein"},{"id":"T8115","span":{"begin":0,"end":64},"obj":"Protein"},{"id":"T8060","span":{"begin":0,"end":64},"obj":"Protein"}],"text":"the E3 ubiquitin ligases TNF receptor-associated factor (TRAF) 2"}
bionlp-st-ge-2016-test-tees
{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T7435","span":{"begin":38,"end":48},"obj":"Binding"},{"id":"T7434","span":{"begin":38,"end":48},"obj":"Binding"},{"id":"T7424","span":{"begin":25,"end":37},"obj":"Protein"},{"id":"T7423","span":{"begin":4,"end":16},"obj":"Protein"}],"relations":[{"id":"R5219","pred":"themeOf","subj":"T7424","obj":"T7434"},{"id":"R5221","pred":"themeOf","subj":"T7424","obj":"T7435"}],"text":"the E3 ubiquitin ligases TNF receptor-associated factor (TRAF) 2"}
test3
{"project":"test3","denotations":[{"id":"T4133","span":{"begin":25,"end":64},"obj":"Protein"},{"id":"T4015","span":{"begin":25,"end":64},"obj":"Protein"}],"text":"the E3 ubiquitin ligases TNF receptor-associated factor (TRAF) 2"}