PMC:3148254 / 9621-9734
Annnotations
bionlp-st-ge-2016-reference
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T15371 | 44-48 | Protein | denotes | CD40 |
T15372 | 49-57 | Positive_regulation | denotes | mediated |
T15373 | 58-62 | Protein | denotes | CD80 |
T15374 | 63-75 | Positive_regulation | denotes | upregulation |
T15375 | 79-88 | Negative_regulation | denotes | defective |
T15376 | 92-96 | Protein | denotes | HOIP |
T15377 | 97-106 | Negative_regulation | denotes | deficient |
R12170 | T15371 | T15372 | causeOf | CD40,mediated |
R12171 | T15372 | T15375 | themeOf | mediated,defective |
R12172 | T15373 | T15374 | themeOf | CD80,upregulation |
R12173 | T15374 | T15372 | themeOf | upregulation,mediated |
R12174 | T15376 | T15377 | themeOf | HOIP,deficient |
bionlp-st-ge-2016-reference-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T15644 | 44-48 | Protein | denotes | CD40 |
T15645 | 58-62 | Protein | denotes | CD80 |
T15646 | 63-75 | Positive_regulation | denotes | upregulation |
T15647 | 79-88 | Negative_regulation | denotes | defective |
T15648 | 49-57 | Positive_regulation | denotes | mediated |
R12390 | T15644 | T15648 | causeOf | CD40,mediated |
R12391 | T15645 | T15646 | themeOf | CD80,upregulation |
R12392 | T15646 | T15647 | themeOf | upregulation,defective |
R12393 | T15646 | T15648 | themeOf | upregulation,mediated |
events-check-again
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T15658 | 44-48 | Protein | denotes | CD40 |
T15659 | 49-57 | Positive_regulation | denotes | mediated |
T15660 | 58-62 | Protein | denotes | CD80 |
T15661 | 63-75 | Positive_regulation | denotes | upregulation |
T15662 | 79-88 | Negative_regulation | denotes | defective |
T15663 | 92-96 | Protein | denotes | HOIP |
T15664 | 97-106 | Negative_regulation | denotes | deficient |
R12397 | T15658 | T15659 | causeOf | CD40,mediated |
R12398 | T15659 | T15662 | themeOf | mediated,defective |
R12399 | T15660 | T15661 | themeOf | CD80,upregulation |
R12400 | T15661 | T15659 | themeOf | upregulation,mediated |
R12401 | T15663 | T15664 | themeOf | HOIP,deficient |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T15490 | 44-57 | JJ | denotes | CD40-mediated |
T15491 | 58-62 | NN | denotes | CD80 |
T15492 | 63-75 | NN | denotes | upregulation |
T15493 | 76-78 | VB | denotes | is |
T15494 | 79-88 | JJ | denotes | defective |
T15495 | 89-91 | IN | denotes | in |
T15496 | 92-106 | JJ | denotes | HOIP-deficient |
T15497 | 107-112 | NN | denotes | cells |
R12278 | T15492 | T15490 | arg1Of | upregulation,CD40-mediated |
R12279 | T15492 | T15491 | arg1Of | upregulation,CD80 |
R12280 | T15492 | T15493 | arg1Of | upregulation,is |
R12281 | T15492 | T15494 | arg1Of | upregulation,defective |
R12282 | T15493 | T15495 | arg1Of | is,in |
R12283 | T15494 | T15493 | arg2Of | defective,is |
R12284 | T15497 | T15495 | arg2Of | cells,in |
R12285 | T15497 | T15496 | arg1Of | cells,HOIP-deficient |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T15392 | 44-57 | JJ | denotes | CD40-mediated |
T15393 | 58-62 | NN | denotes | CD80 |
T15394 | 63-75 | NN | denotes | upregulation |
T15395 | 76-78 | VBZ | denotes | is |
T15396 | 79-88 | JJ | denotes | defective |
T15397 | 89-91 | IN | denotes | in |
T15398 | 92-106 | JJ | denotes | HOIP-deficient |
T15399 | 107-112 | NNS | denotes | cells |
T15400 | 112-113 | . | denotes | . |
R12180 | T15392 | T15394 | amod | CD40-mediated,upregulation |
R12181 | T15393 | T15394 | compound | CD80,upregulation |
R12182 | T15394 | T15395 | nsubj | upregulation,is |
R12183 | T15395 | T15395 | ROOT | is,is |
R12184 | T15396 | T15395 | acomp | defective,is |
R12185 | T15397 | T15396 | prep | in,defective |
R12186 | T15398 | T15399 | amod | HOIP-deficient,cells |
R12187 | T15399 | T15397 | pobj | cells,in |
R12188 | T15400 | T15395 | punct | .,is |
GO-CC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T15601 | 107-112 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T15388 | 44-113 | Sentence | denotes | CD40-mediated CD80 upregulation is defective in HOIP-deficient cells. |
T67 | 0-113 | Sentence | denotes | 10.1371/journal.pone.0023061.g002 Figure 2 CD40-mediated CD80 upregulation is defective in HOIP-deficient cells. |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T15581 | 44-48 | P25942 | denotes | CD40 |
T15582 | 58-62 | P33681 | denotes | CD80 |
T15583 | 92-96 | Q96EP0 | denotes | HOIP |
test2
Id | Subject | Object | Predicate | Lexical cue | Speculation |
---|---|---|---|---|---|
T15355 | 44-48 | Protein | denotes | CD40 | |
T15356 | 49-57 | Positive_regulation | denotes | mediated | |
T15357 | 58-62 | Protein | denotes | CD80 | |
T15358 | 63-75 | Positive_regulation | denotes | upregulation | |
T15359 | 79-88 | Negative_regulation | denotes | defective | true |
T15360 | 92-96 | Protein | denotes | HOIP | |
T15361 | 97-106 | Negative_regulation | denotes | deficient | |
R12159 | T15355 | T15356 | causeOf | CD40,mediated | |
R12160 | T15356 | T15359 | themeOf | mediated,defective | |
R12161 | T15357 | T15358 | themeOf | CD80,upregulation | |
R12162 | T15358 | T15356 | themeOf | upregulation,mediated | |
R12163 | T15358 | T15359 | themeOf | upregulation,defective | |
R12164 | T15360 | T15361 | themeOf | HOIP,deficient | |
R12165 | T15361 | T15359 | causeOf | deficient,defective |