PMC:3148254 / 6488-6630 JSONTXT

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/3148254","sourcedb":"PMC","sourceid":"3148254","source_url":"http://www.ncbi.nlm.nih.gov/pmc/3148254","text":"This step allowed us to perform a second round of targeting and drug selection, generating cells in which both copies of Rnf31 were disrupted.","tracks":[{"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T2843","span":{"begin":121,"end":126},"obj":"Protein"},{"id":"T2844","span":{"begin":132,"end":141},"obj":"Negative_regulation"}],"relations":[{"id":"R2115","pred":"themeOf","subj":"T2843","obj":"T2844"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"attributes":[{"subj":"T2843","pred":"source","obj":"bionlp-st-ge-2016-reference"},{"subj":"T2844","pred":"source","obj":"bionlp-st-ge-2016-reference"}]},{"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T3975","span":{"begin":121,"end":126},"obj":"Protein"}],"attributes":[{"subj":"T3975","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"}]},{"project":"events-check-again","denotations":[{"id":"T4014","span":{"begin":121,"end":126},"obj":"Protein"},{"id":"T4015","span":{"begin":132,"end":141},"obj":"Negative_regulation"}],"relations":[{"id":"R3098","pred":"themeOf","subj":"T4014","obj":"T4015"}],"attributes":[{"subj":"T4014","pred":"source","obj":"events-check-again"},{"subj":"T4015","pred":"source","obj":"events-check-again"}]},{"project":"pmc-enju-pas","denotations":[{"id":"T3608","span":{"begin":0,"end":4},"obj":"DT"},{"id":"T3609","span":{"begin":5,"end":9},"obj":"NN"},{"id":"T3610","span":{"begin":10,"end":17},"obj":"VB"},{"id":"T3611","span":{"begin":18,"end":20},"obj":"PRP"},{"id":"T3612","span":{"begin":21,"end":23},"obj":"TO"},{"id":"T3613","span":{"begin":24,"end":31},"obj":"VB"},{"id":"T3614","span":{"begin":32,"end":33},"obj":"DT"},{"id":"T3615","span":{"begin":34,"end":40},"obj":"JJ"},{"id":"T3616","span":{"begin":41,"end":46},"obj":"NN"},{"id":"T3617","span":{"begin":47,"end":49},"obj":"IN"},{"id":"T3618","span":{"begin":50,"end":59},"obj":"VB"},{"id":"T3619","span":{"begin":60,"end":63},"obj":"CC"},{"id":"T3620","span":{"begin":64,"end":68},"obj":"NN"},{"id":"T3621","span":{"begin":69,"end":78},"obj":"NN"},{"id":"T3622","span":{"begin":78,"end":79},"obj":"-COMMA-"},{"id":"T3623","span":{"begin":80,"end":90},"obj":"VB"},{"id":"T3624","span":{"begin":91,"end":96},"obj":"NN"},{"id":"T3625","span":{"begin":97,"end":99},"obj":"IN"},{"id":"T3626","span":{"begin":100,"end":105},"obj":"WDT"},{"id":"T3627","span":{"begin":106,"end":110},"obj":"DT"},{"id":"T3628","span":{"begin":111,"end":117},"obj":"NN"},{"id":"T3629","span":{"begin":118,"end":120},"obj":"IN"},{"id":"T3630","span":{"begin":121,"end":126},"obj":"NN"},{"id":"T3631","span":{"begin":127,"end":131},"obj":"VB"},{"id":"T3632","span":{"begin":132,"end":141},"obj":"VB"}],"relations":[{"id":"R2857","pred":"arg1Of","subj":"T3609","obj":"T3608"},{"id":"R2858","pred":"arg1Of","subj":"T3609","obj":"T3610"},{"id":"R2859","pred":"arg1Of","subj":"T3610","obj":"T3622"},{"id":"R2860","pred":"modOf","subj":"T3610","obj":"T3623"},{"id":"R2861","pred":"arg2Of","subj":"T3611","obj":"T3610"},{"id":"R2862","pred":"arg1Of","subj":"T3611","obj":"T3613"},{"id":"R2863","pred":"arg3Of","subj":"T3613","obj":"T3610"},{"id":"R2864","pred":"arg1Of","subj":"T3613","obj":"T3612"},{"id":"R2865","pred":"arg2Of","subj":"T3616","obj":"T3613"},{"id":"R2866","pred":"arg1Of","subj":"T3616","obj":"T3614"},{"id":"R2867","pred":"arg1Of","subj":"T3616","obj":"T3615"},{"id":"R2868","pred":"arg1Of","subj":"T3616","obj":"T3617"},{"id":"R2869","pred":"arg1Of","subj":"T3618","obj":"T3619"},{"id":"R2870","pred":"arg2Of","subj":"T3619","obj":"T3617"},{"id":"R2871","pred":"arg2Of","subj":"T3621","obj":"T3619"},{"id":"R2872","pred":"arg1Of","subj":"T3621","obj":"T3620"},{"id":"R2873","pred":"arg2Of","subj":"T3624","obj":"T3623"},{"id":"R2874","pred":"arg2Of","subj":"T3624","obj":"T3625"},{"id":"R2875","pred":"arg1Of","subj":"T3624","obj":"T3626"},{"id":"R2876","pred":"arg1Of","subj":"T3628","obj":"T3627"},{"id":"R2877","pred":"arg1Of","subj":"T3628","obj":"T3629"},{"id":"R2878","pred":"arg1Of","subj":"T3628","obj":"T3631"},{"id":"R2879","pred":"arg2Of","subj":"T3628","obj":"T3632"},{"id":"R2880","pred":"arg2Of","subj":"T3630","obj":"T3629"},{"id":"R2881","pred":"arg1Of","subj":"T3632","obj":"T3625"},{"id":"R2882","pred":"arg2Of","subj":"T3632","obj":"T3631"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"attributes":[{"subj":"T3608","pred":"source","obj":"pmc-enju-pas"},{"subj":"T3609","pred":"source","obj":"pmc-enju-pas"},{"subj":"T3610","pred":"source","obj":"pmc-enju-pas"},{"subj":"T3611","pred":"source","obj":"pmc-enju-pas"},{"subj":"T3612","pred":"source","obj":"pmc-enju-pas"},{"subj":"T3613","pred":"source","obj":"pmc-enju-pas"},{"subj":"T3614","pred":"source","obj":"pmc-enju-pas"},{"subj":"T3615","pred":"source","obj":"pmc-enju-pas"},{"subj":"T3616","pred":"source","obj":"pmc-enju-pas"},{"subj":"T3617","pred":"source","obj":"pmc-enju-pas"},{"subj":"T3618","pred":"source","obj":"pmc-enju-pas"},{"subj":"T3619","pred":"source","obj":"pmc-enju-pas"},{"subj":"T3620","pred":"source","obj":"pmc-enju-pas"},{"subj":"T3621","pred":"source","obj":"pmc-enju-pas"},{"subj":"T3622","pred":"source","obj":"pmc-enju-pas"},{"subj":"T3623","pred":"source","obj":"pmc-enju-pas"},{"subj":"T3624","pred":"source","obj":"pmc-enju-pas"},{"subj":"T3625","pred":"source","obj":"pmc-enju-pas"},{"subj":"T3626","pred":"source","obj":"pmc-enju-pas"},{"subj":"T3627","pred":"source","obj":"pmc-enju-pas"},{"subj":"T3628","pred":"source","obj":"pmc-enju-pas"},{"subj":"T3629","pred":"source","obj":"pmc-enju-pas"},{"subj":"T3630","pred":"source","obj":"pmc-enju-pas"},{"subj":"T3631","pred":"source","obj":"pmc-enju-pas"},{"subj":"T3632","pred":"source","obj":"pmc-enju-pas"}]},{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T3158","span":{"begin":0,"end":4},"obj":"DT"},{"id":"T3159","span":{"begin":5,"end":9},"obj":"NN"},{"id":"T3160","span":{"begin":10,"end":17},"obj":"VBD"},{"id":"T3161","span":{"begin":18,"end":20},"obj":"PRP"},{"id":"T3162","span":{"begin":21,"end":23},"obj":"TO"},{"id":"T3163","span":{"begin":24,"end":31},"obj":"VB"},{"id":"T3164","span":{"begin":32,"end":33},"obj":"DT"},{"id":"T3165","span":{"begin":34,"end":40},"obj":"JJ"},{"id":"T3166","span":{"begin":41,"end":46},"obj":"NN"},{"id":"T3167","span":{"begin":47,"end":49},"obj":"IN"},{"id":"T3168","span":{"begin":50,"end":59},"obj":"VBG"},{"id":"T3169","span":{"begin":60,"end":63},"obj":"CC"},{"id":"T3170","span":{"begin":64,"end":68},"obj":"NN"},{"id":"T3171","span":{"begin":69,"end":78},"obj":"NN"},{"id":"T3172","span":{"begin":78,"end":79},"obj":","},{"id":"T3173","span":{"begin":80,"end":90},"obj":"VBG"},{"id":"T3174","span":{"begin":91,"end":96},"obj":"NNS"},{"id":"T3175","span":{"begin":97,"end":99},"obj":"IN"},{"id":"T3176","span":{"begin":100,"end":105},"obj":"WDT"},{"id":"T3177","span":{"begin":106,"end":110},"obj":"DT"},{"id":"T3178","span":{"begin":111,"end":117},"obj":"NNS"},{"id":"T3179","span":{"begin":118,"end":120},"obj":"IN"},{"id":"T3180","span":{"begin":121,"end":126},"obj":"NNS"},{"id":"T3181","span":{"begin":127,"end":131},"obj":"VBD"},{"id":"T3182","span":{"begin":132,"end":141},"obj":"VBN"},{"id":"T3183","span":{"begin":141,"end":142},"obj":"."}],"relations":[{"id":"R2403","pred":"det","subj":"T3158","obj":"T3159"},{"id":"R2404","pred":"nsubj","subj":"T3159","obj":"T3160"},{"id":"R2405","pred":"ROOT","subj":"T3160","obj":"T3160"},{"id":"R2406","pred":"nsubj","subj":"T3161","obj":"T3163"},{"id":"R2407","pred":"aux","subj":"T3162","obj":"T3163"},{"id":"R2408","pred":"ccomp","subj":"T3163","obj":"T3160"},{"id":"R2409","pred":"det","subj":"T3164","obj":"T3166"},{"id":"R2410","pred":"amod","subj":"T3165","obj":"T3166"},{"id":"R2411","pred":"dobj","subj":"T3166","obj":"T3163"},{"id":"R2412","pred":"prep","subj":"T3167","obj":"T3166"},{"id":"R2413","pred":"pobj","subj":"T3168","obj":"T3167"},{"id":"R2414","pred":"cc","subj":"T3169","obj":"T3168"},{"id":"R2415","pred":"compound","subj":"T3170","obj":"T3171"},{"id":"R2416","pred":"conj","subj":"T3171","obj":"T3168"},{"id":"R2417","pred":"punct","subj":"T3172","obj":"T3171"},{"id":"R2418","pred":"conj","subj":"T3173","obj":"T3168"},{"id":"R2419","pred":"dobj","subj":"T3174","obj":"T3173"},{"id":"R2420","pred":"prep","subj":"T3175","obj":"T3182"},{"id":"R2421","pred":"pobj","subj":"T3176","obj":"T3175"},{"id":"R2422","pred":"det","subj":"T3177","obj":"T3178"},{"id":"R2423","pred":"nsubjpass","subj":"T3178","obj":"T3182"},{"id":"R2424","pred":"prep","subj":"T3179","obj":"T3178"},{"id":"R2425","pred":"pobj","subj":"T3180","obj":"T3179"},{"id":"R2426","pred":"auxpass","subj":"T3181","obj":"T3182"},{"id":"R2427","pred":"relcl","subj":"T3182","obj":"T3174"},{"id":"R2428","pred":"punct","subj":"T3183","obj":"T3160"}],"attributes":[{"subj":"T3158","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T3159","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T3160","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T3161","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T3162","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T3163","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T3164","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T3165","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T3166","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T3167","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T3168","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T3169","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T3170","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T3171","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T3172","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T3173","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T3174","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T3175","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T3176","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T3177","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T3178","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T3179","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T3180","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T3181","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T3182","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T3183","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"}]},{"project":"GO-CC","denotations":[{"id":"T3843","span":{"begin":91,"end":96},"obj":"http://purl.obolibrary.org/obo/GO_0005623"}],"attributes":[{"subj":"T3843","pred":"source","obj":"GO-CC"}]},{"project":"sentences","denotations":[{"id":"T2873","span":{"begin":0,"end":142},"obj":"Sentence"},{"id":"T45","span":{"begin":0,"end":142},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T2873","pred":"source","obj":"sentences"},{"subj":"T45","pred":"source","obj":"sentences"}]},{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T3807","span":{"begin":121,"end":126},"obj":"Q96EP0"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"attributes":[{"subj":"T3807","pred":"source","obj":"bionlp-st-ge-2016-uniprot"}]},{"project":"test2","denotations":[{"id":"T2793","span":{"begin":121,"end":126},"obj":"Protein"},{"id":"T2794","span":{"begin":132,"end":141},"obj":"Negative_regulation"}],"relations":[{"id":"R2092","pred":"themeOf","subj":"T2793","obj":"T2794"}],"attributes":[{"subj":"T2793","pred":"source","obj":"test2"},{"subj":"T2794","pred":"source","obj":"test2"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"bionlp-st-ge-2016-reference","color":"#ecdf93","default":true},{"id":"bionlp-st-ge-2016-reference-tees","color":"#c593ec"},{"id":"events-check-again","color":"#93ecab"},{"id":"pmc-enju-pas","color":"#ec9394"},{"id":"bionlp-st-ge-2016-spacy-parsed","color":"#93aeec"},{"id":"GO-CC","color":"#c8ec93"},{"id":"sentences","color":"#ec93e2"},{"id":"bionlp-st-ge-2016-uniprot","color":"#93ecdc"},{"id":"test2","color":"#ecc293"}]}]}}