PMC:3148254 / 5751-5953
Annnotations
bionlp-st-ge-2016-reference
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2835 | 71-75 | Protein | denotes | CD40 |
bionlp-st-ge-2016-reference-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3970 | 71-75 | Protein | denotes | CD40 |
events-check-again
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T4006 | 71-75 | Protein | denotes | CD40 |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3482 | 0-4 | DT | denotes | This |
T3483 | 5-9 | NN | denotes | cell |
T3484 | 10-14 | NN | denotes | line |
T3485 | 15-18 | VB | denotes | has |
T3486 | 19-23 | VB | denotes | been |
T3487 | 24-36 | RB | denotes | particularly |
T3488 | 37-43 | JJ | denotes | useful |
T3489 | 44-46 | IN | denotes | in |
T3490 | 47-50 | DT | denotes | the |
T3491 | 51-67 | NN | denotes | characterization |
T3492 | 68-70 | IN | denotes | of |
T3493 | 71-75 | NN | denotes | CD40 |
T3494 | 76-85 | NN | denotes | signaling |
T3495 | 86-96 | NN | denotes | mechanisms |
T3496 | 97-100 | JJ | denotes | due |
T3497 | 101-103 | TO | denotes | to |
T3498 | 104-107 | DT | denotes | the |
T3499 | 108-116 | JJ | denotes | relative |
T3500 | 117-121 | NN | denotes | ease |
T3501 | 122-126 | IN | denotes | with |
T3502 | 127-132 | WDT | denotes | which |
T3503 | 133-136 | PRP-DOLLAR- | denotes | its |
T3504 | 137-143 | NN | denotes | genome |
T3505 | 144-147 | MD | denotes | can |
T3506 | 148-150 | VB | denotes | be |
T3507 | 151-159 | VB | denotes | modified |
T3508 | 160-162 | IN | denotes | by |
T3509 | 163-173 | JJ | denotes | homologous |
T3510 | 174-187 | NN | denotes | recombination |
T3511 | 188-189 | -LRB- | denotes | [ |
T3512 | 189-190 | CD | denotes | 7 |
T3513 | 190-191 | -RRB- | denotes | ] |
T3514 | 191-192 | -COMMA- | denotes | , |
T3515 | 193-194 | -LRB- | denotes | [ |
T3516 | 194-195 | CD | denotes | 8 |
T3517 | 195-196 | -RRB- | denotes | ] |
T3518 | 196-197 | -COMMA- | denotes | , |
T3519 | 198-199 | -LRB- | denotes | [ |
T3520 | 199-200 | CD | denotes | 9 |
T3521 | 200-201 | -RRB- | denotes | ] |
R2727 | T3484 | T3482 | arg1Of | line,This |
R2728 | T3484 | T3483 | arg1Of | line,cell |
R2729 | T3484 | T3485 | arg1Of | line,has |
R2730 | T3484 | T3486 | arg1Of | line,been |
R2731 | T3484 | T3488 | arg1Of | line,useful |
R2732 | T3486 | T3485 | arg2Of | been,has |
R2733 | T3486 | T3514 | arg1Of | been,"," |
R2734 | T3486 | T3515 | arg1Of | been,[ |
R2735 | T3486 | T3518 | arg1Of | been,"," |
R2736 | T3486 | T3519 | arg1Of | been,[ |
R2737 | T3488 | T3486 | arg2Of | useful,been |
R2738 | T3488 | T3487 | arg1Of | useful,particularly |
R2739 | T3488 | T3489 | arg1Of | useful,in |
R2740 | T3488 | T3497 | arg1Of | useful,to |
R2741 | T3491 | T3489 | arg2Of | characterization,in |
R2742 | T3491 | T3490 | arg1Of | characterization,the |
R2743 | T3491 | T3492 | arg1Of | characterization,of |
R2744 | T3495 | T3492 | arg2Of | mechanisms,of |
R2745 | T3495 | T3493 | arg1Of | mechanisms,CD40 |
R2746 | T3495 | T3494 | arg1Of | mechanisms,signaling |
R2747 | T3497 | T3496 | arg1Of | to,due |
R2748 | T3500 | T3497 | arg2Of | ease,to |
R2749 | T3500 | T3498 | arg1Of | ease,the |
R2750 | T3500 | T3499 | arg1Of | ease,relative |
R2751 | T3500 | T3501 | arg2Of | ease,with |
R2752 | T3500 | T3502 | arg1Of | ease,which |
R2753 | T3504 | T3503 | arg1Of | genome,its |
R2754 | T3504 | T3505 | arg1Of | genome,can |
R2755 | T3504 | T3506 | arg1Of | genome,be |
R2756 | T3504 | T3507 | arg2Of | genome,modified |
R2757 | T3507 | T3501 | arg1Of | modified,with |
R2758 | T3507 | T3505 | arg2Of | modified,can |
R2759 | T3507 | T3506 | arg2Of | modified,be |
R2760 | T3510 | T3507 | arg1Of | recombination,modified |
R2761 | T3510 | T3508 | arg2Of | recombination,by |
R2762 | T3510 | T3509 | arg1Of | recombination,homologous |
R2763 | T3510 | T3511 | arg1Of | recombination,[ |
R2764 | T3512 | T3511 | arg2Of | 7,[ |
R2765 | T3513 | T3511 | arg3Of | ],[ |
R2766 | T3516 | T3515 | arg2Of | 8,[ |
R2767 | T3517 | T3515 | arg3Of | ],[ |
R2768 | T3520 | T3519 | arg2Of | 9,[ |
R2769 | T3521 | T3519 | arg3Of | ],[ |
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
21829693-12958312-89653759 | 189-190 | 12958312 | denotes | 7 |
21829693-17878362-89653760 | 194-195 | 17878362 | denotes | 8 |
21829693-14981114-89653761 | 199-200 | 14981114 | denotes | 9 |
T92919 | 189-190 | 12958312 | denotes | 7 |
T70074 | 194-195 | 17878362 | denotes | 8 |
T10373 | 199-200 | 14981114 | denotes | 9 |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3028 | 0-4 | DT | denotes | This |
T3029 | 5-9 | NN | denotes | cell |
T3030 | 10-14 | NN | denotes | line |
T3031 | 15-18 | VBZ | denotes | has |
T3032 | 19-23 | VBN | denotes | been |
T3033 | 24-36 | RB | denotes | particularly |
T3034 | 37-43 | JJ | denotes | useful |
T3035 | 44-46 | IN | denotes | in |
T3036 | 47-50 | DT | denotes | the |
T3037 | 51-67 | NN | denotes | characterization |
T3038 | 68-70 | IN | denotes | of |
T3039 | 71-75 | NNP | denotes | CD40 |
T3040 | 76-85 | VBG | denotes | signaling |
T3041 | 86-96 | NNS | denotes | mechanisms |
T3042 | 97-100 | JJ | denotes | due |
T3043 | 101-103 | TO | denotes | to |
T3044 | 104-107 | DT | denotes | the |
T3045 | 108-116 | JJ | denotes | relative |
T3046 | 117-121 | NN | denotes | ease |
T3047 | 122-126 | IN | denotes | with |
T3048 | 127-132 | WDT | denotes | which |
T3049 | 133-136 | PRP$ | denotes | its |
T3050 | 137-143 | NN | denotes | genome |
T3051 | 144-147 | MD | denotes | can |
T3052 | 148-150 | VB | denotes | be |
T3053 | 151-159 | VBN | denotes | modified |
T3054 | 160-162 | IN | denotes | by |
T3055 | 163-173 | RB | denotes | homologous |
T3056 | 174-187 | NN | denotes | recombination |
T3057 | 188-189 | NN | denotes | [ |
T3058 | 189-190 | CD | denotes | 7 |
T3059 | 190-191 | NNP | denotes | ] |
T3060 | 191-192 | , | denotes | , |
T3061 | 193-194 | NNP | denotes | [ |
T3062 | 194-195 | CD | denotes | 8 |
T3063 | 195-196 | NNP | denotes | ] |
T3064 | 196-197 | , | denotes | , |
T3065 | 198-199 | NNP | denotes | [ |
T3066 | 199-200 | CD | denotes | 9 |
T3067 | 200-201 | NNP | denotes | ] |
T3068 | 201-202 | . | denotes | . |
R2273 | T3028 | T3030 | det | This,line |
R2274 | T3029 | T3030 | compound | cell,line |
R2275 | T3030 | T3032 | nsubj | line,been |
R2276 | T3031 | T3032 | aux | has,been |
R2277 | T3032 | T3032 | ROOT | been,been |
R2278 | T3033 | T3034 | advmod | particularly,useful |
R2279 | T3034 | T3032 | acomp | useful,been |
R2280 | T3035 | T3034 | prep | in,useful |
R2281 | T3036 | T3037 | det | the,characterization |
R2282 | T3037 | T3035 | pobj | characterization,in |
R2283 | T3038 | T3037 | prep | of,characterization |
R2284 | T3039 | T3038 | pobj | CD40,of |
R2285 | T3040 | T3032 | advcl | signaling,been |
R2286 | T3041 | T3040 | dobj | mechanisms,signaling |
R2287 | T3042 | T3041 | amod | due,mechanisms |
R2288 | T3043 | T3042 | pcomp | to,due |
R2289 | T3044 | T3046 | det | the,ease |
R2290 | T3045 | T3046 | amod | relative,ease |
R2291 | T3046 | T3042 | pobj | ease,due |
R2292 | T3047 | T3053 | prep | with,modified |
R2293 | T3048 | T3047 | pobj | which,with |
R2294 | T3049 | T3050 | poss | its,genome |
R2295 | T3050 | T3053 | nsubjpass | genome,modified |
R2296 | T3051 | T3053 | aux | can,modified |
R2297 | T3052 | T3053 | auxpass | be,modified |
R2298 | T3053 | T3046 | relcl | modified,ease |
R2299 | T3054 | T3053 | agent | by,modified |
R2300 | T3055 | T3057 | nmod | homologous,[ |
R2301 | T3056 | T3057 | compound | recombination,[ |
R2302 | T3057 | T3059 | nmod | [,] |
R2303 | T3058 | T3059 | nummod | 7,] |
R2304 | T3059 | T3054 | pobj | ],by |
R2305 | T3060 | T3059 | punct | ",",] |
R2306 | T3061 | T3063 | nmod | [,] |
R2307 | T3062 | T3063 | nummod | 8,] |
R2308 | T3063 | T3059 | conj | ],] |
R2309 | T3064 | T3063 | punct | ",",] |
R2310 | T3065 | T3067 | det | [,] |
R2311 | T3066 | T3067 | nummod | 9,] |
R2312 | T3067 | T3063 | appos | ],] |
R2313 | T3068 | T3032 | punct | .,been |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3837 | 76-85 | http://purl.obolibrary.org/obo/GO_0023052 | denotes | signaling |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2869 | 0-202 | Sentence | denotes | This cell line has been particularly useful in the characterization of CD40 signaling mechanisms due to the relative ease with which its genome can be modified by homologous recombination [7], [8], [9]. |
T41 | 0-202 | Sentence | denotes | This cell line has been particularly useful in the characterization of CD40 signaling mechanisms due to the relative ease with which its genome can be modified by homologous recombination [7], [8], [9]. |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3800 | 71-75 | P25942 | denotes | CD40 |
T3801 | 108-116 | Q04864 | denotes | relative |
test2
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2785 | 71-75 | Protein | denotes | CD40 |