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PMC:3148254 / 3648-3810 JSONTXT

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bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue Speculation
T1152 78-82 Protein denotes HOIP
T1153 83-103 Positive_regulation denotes functions downstream true
T1154 107-112 Protein denotes TRAF2
T1155 120-124 Protein denotes CD40
T1156 152-156 Protein denotes HOIP
T6574 152-156 Protein denotes HOIP
R803 T1152 T1153 causeOf HOIP,functions downstream
R804 T1154 T1153 themeOf TRAF2,functions downstream

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T2611 107-112 Protein denotes TRAF2
T2612 120-124 Protein denotes CD40

events-check-again

Id Subject Object Predicate Lexical cue Speculation
T2681 78-82 Protein denotes HOIP
T2682 83-103 Positive_regulation denotes functions downstream true
T2683 107-112 Protein denotes TRAF2
T2684 120-124 Protein denotes CD40
T2685 152-156 Protein denotes HOIP
T8586 152-156 Protein denotes HOIP
R2027 T2681 T2682 causeOf HOIP,functions downstream
R2034 T2683 T2682 themeOf TRAF2,functions downstream

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T2021 2-11 JJ denotes agonistic
T2022 12-20 NN denotes antibody
T2023 21-22 -LRB- denotes [
T2024 22-23 CD denotes 6
T2025 23-24 -RRB- denotes ]
T2026 26-31 DT denotes These
T2027 32-35 CC denotes and
T2028 36-41 JJ denotes other
T2029 42-50 NN denotes findings
T2030 51-54 VB denotes led
T2031 55-57 PRP denotes us
T2032 58-60 TO denotes to
T2033 61-72 VB denotes hypothesize
T2034 73-77 IN denotes that
T2035 78-82 NN denotes HOIP
T2036 83-92 VB denotes functions
T2037 93-103 RB denotes downstream
T2038 104-106 IN denotes of
T2039 107-112 NN denotes TRAF2
T2040 113-115 IN denotes in
T2041 116-119 DT denotes the
T2042 120-124 NN denotes CD40
T2043 125-134 NN denotes signaling
T2044 135-142 NN denotes pathway
T2045 143-146 CC denotes and
T2046 147-151 IN denotes that
T2047 152-156 NN denotes HOIP
T2048 157-159 VB denotes is
T7475 152-156 NN denotes HOIP
T7476 157-159 VB denotes is
R1662 T2022 T2021 arg1Of antibody,agonistic
R1664 T2024 T2023 arg2Of 6,[
R1665 T2025 T2023 arg3Of ],[
R1666 T2029 T2026 arg1Of findings,These
R1667 T2029 T2027 arg1Of findings,and
R1668 T2029 T2028 arg1Of findings,other
R1669 T2029 T2030 arg1Of findings,led
R1671 T2031 T2030 arg2Of us,led
R1672 T2031 T2033 arg1Of us,hypothesize
R1673 T2033 T2030 arg3Of hypothesize,led
R1674 T2033 T2032 arg1Of hypothesize,to
R1676 T2035 T2036 arg1Of HOIP,functions
R1677 T2036 T2034 arg1Of functions,that
R1678 T2036 T2037 arg1Of functions,downstream
R1679 T2036 T2040 arg1Of functions,in
R1680 T2036 T2045 arg1Of functions,and
R1681 T2037 T2038 arg1Of downstream,of
R1682 T2039 T2038 arg2Of TRAF2,of
R1684 T2044 T2040 arg2Of pathway,in
R1685 T2044 T2041 arg1Of pathway,the
R1686 T2044 T2042 arg1Of pathway,CD40
R1687 T2044 T2043 arg1Of pathway,signaling
R1688 T2045 T2033 arg2Of and,hypothesize
R1690 T2046 T2045 arg2Of that,and
R1692 T2047 T2048 arg1Of HOIP,is
R1694 T2048 T2046 arg2Of is,that
R5833 T7475 T7476 arg1Of HOIP,is

2_test

Id Subject Object Predicate Lexical cue
21829693-20614026-89653754 22-23 20614026 denotes 6
T18092 22-23 20614026 denotes 6

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T1504 2-11 JJ denotes agonistic
T1505 12-20 NN denotes antibody
T1506 21-22 NN denotes [
T1507 22-23 CD denotes 6
T1508 23-24 NNP denotes ]
T1509 24-25 . denotes .
T1510 26-31 DT denotes These
T1511 32-35 CC denotes and
T1512 36-41 JJ denotes other
T1513 42-50 NNS denotes findings
T1514 51-54 VBD denotes led
T1515 55-57 PRP denotes us
T1516 58-60 TO denotes to
T1517 61-72 VB denotes hypothesize
T1518 73-77 DT denotes that
T1519 78-82 NNP denotes HOIP
T1520 83-92 NNS denotes functions
T1521 93-103 JJ denotes downstream
T1522 104-106 IN denotes of
T1523 107-112 CD denotes TRAF2
T1524 113-115 IN denotes in
T1525 116-119 DT denotes the
T1526 120-124 NNP denotes CD40
T1527 125-134 VBG denotes signaling
T1528 135-142 NN denotes pathway
T1529 143-146 CC denotes and
T1530 147-151 IN denotes that
T1531 152-156 NNP denotes HOIP
T1532 157-159 VBZ denotes is
T6730 152-156 NNP denotes HOIP
T6731 157-159 VBZ denotes is
R1122 T1504 T1506 amod agonistic,[
R1123 T1505 T1506 compound antibody,[
R1124 T1506 T1508 nmod [,]
R1125 T1507 T1508 nummod 6,]
R1128 T1510 T1513 det These,findings
R1129 T1511 T1510 cc and,These
R1130 T1512 T1513 amod other,findings
R1131 T1513 T1514 nsubj findings,led
R1132 T1514 T1514 ROOT led,led
R1133 T1515 T1514 dobj us,led
R1134 T1516 T1517 aux to,hypothesize
R1135 T1517 T1514 xcomp hypothesize,led
R1136 T1518 T1520 det that,functions
R1137 T1519 T1520 compound HOIP,functions
R1138 T1520 T1517 dobj functions,hypothesize
R1139 T1521 T1520 dobj downstream,functions
R1140 T1522 T1521 prep of,downstream
R1141 T1523 T1522 pobj TRAF2,of
R1142 T1524 T1521 prep in,downstream
R1143 T1525 T1526 det the,CD40
R1144 T1526 T1524 pobj CD40,in
R1145 T1527 T1520 prep signaling,functions
R1146 T1528 T1527 dobj pathway,signaling
R1147 T1529 T1520 cc and,functions
R1148 T1530 T1532 mark that,is
R1149 T1531 T1532 nsubj HOIP,is
R1150 T1532 T1520 conj is,functions
R5088 T6730 T6731 nsubj HOIP,is
R5089 T6731 T6731 ROOT is,is

GO-BP

Id Subject Object Predicate Lexical cue
T2320 125-134 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T2347 120-142 http://purl.obolibrary.org/obo/GO_2000348 denotes CD40 signaling pathway
T2362 120-142 http://purl.obolibrary.org/obo/GO_0023035 denotes CD40 signaling pathway

GO-MF

Id Subject Object Predicate Lexical cue
T2404 12-20 http://purl.obolibrary.org/obo/GO_0003823 denotes antibody

GO-CC

Id Subject Object Predicate Lexical cue
T2422 12-20 http://purl.obolibrary.org/obo/GO_0019815 denotes antibody
T2423 12-20 http://purl.obolibrary.org/obo/GO_0042571 denotes antibody

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T2273 78-82 Q96EP0 denotes HOIP
T2274 107-112 Q12933 denotes TRAF2
T2275 120-124 P25942 denotes CD40
T2276 152-156 Q96EP0 denotes HOIP
T8190 152-156 Q96EP0 denotes HOIP

test2

Id Subject Object Predicate Lexical cue
T1082 78-82 Protein denotes HOIP
T1083 93-103 Regulation denotes downstream
T1084 107-112 Protein denotes TRAF2
T1085 120-124 Protein denotes CD40
T1086 152-156 Protein denotes HOIP
T6451 152-156 Protein denotes HOIP