PMC:3148254 / 19983-20107
Annnotations
bionlp-st-ge-2016-reference
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T6659 | 13-17 | Protein | denotes | IKKα |
T6660 | 18-19 | Protein | denotes | β |
T6661 | 24-28 | Protein | denotes | IKKγ |
T6662 | 52-56 | Protein | denotes | CD40 |
T6663 | 91-95 | Protein | denotes | HOIP |
T6664 | 96-105 | Negative_regulation | denotes | deficient |
R5067 | T6663 | T6664 | themeOf | HOIP,deficient |
bionlp-st-ge-2016-reference-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T8661 | 13-28 | Protein | denotes | IKKα/β and IKKγ |
T8662 | 52-56 | Protein | denotes | CD40 |
T8663 | 38-48 | Gene_expression | denotes | detectable |
T8664 | 38-48 | Gene_expression | denotes | detectable |
R6793 | T8661 | T8663 | themeOf | IKKα/β and IKKγ,detectable |
R6794 | T8662 | T8664 | themeOf | CD40,detectable |
events-check-again
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T8754 | 13-17 | Protein | denotes | IKKα |
T8755 | 18-19 | Protein | denotes | β |
T8756 | 24-28 | Protein | denotes | IKKγ |
T8757 | 52-56 | Protein | denotes | CD40 |
T8758 | 91-95 | Protein | denotes | HOIP |
T8759 | 96-105 | Negative_regulation | denotes | deficient |
R6813 | T8758 | T8759 | themeOf | HOIP,deficient |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T7843 | 0-2 | IN | denotes | In |
T7844 | 3-11 | NN | denotes | contrast |
T7845 | 11-12 | -COMMA- | denotes | , |
T7846 | 13-19 | NN | denotes | IKKα/β |
T7847 | 20-23 | CC | denotes | and |
T7848 | 24-28 | NN | denotes | IKKγ |
T7849 | 29-33 | VB | denotes | were |
T7850 | 34-37 | RB | denotes | not |
T7851 | 38-48 | JJ | denotes | detectable |
T7852 | 49-51 | IN | denotes | in |
T7853 | 52-56 | NN | denotes | CD40 |
T7854 | 57-75 | NN | denotes | immunoprecipitates |
T7855 | 76-85 | VB | denotes | recovered |
T7856 | 86-90 | IN | denotes | from |
T7857 | 91-105 | JJ | denotes | HOIP-deficient |
T7858 | 106-111 | NN | denotes | cells |
T7859 | 112-113 | -LRB- | denotes | ( |
T7860 | 113-117 | NN | denotes | Fig. |
T7861 | 118-120 | NN | denotes | 5B |
T7862 | 120-121 | -COMMA- | denotes | , |
T7863 | 121-122 | NN | denotes | C |
T7864 | 122-123 | -RRB- | denotes | ) |
R6160 | T7861 | T7859 | arg2Of | 5B,( |
R6161 | T7861 | T7860 | arg1Of | 5B,Fig. |
R6162 | T7861 | T7862 | arg1Of | 5B,"," |
R6165 | T7863 | T7862 | arg2Of | C,"," |
R6166 | T7864 | T7859 | arg3Of | ),( |
R6297 | T7844 | T7843 | arg2Of | contrast,In |
R6298 | T7846 | T7847 | arg1Of | IKKα/β,and |
R6308 | T7847 | T7849 | arg1Of | and,were |
R6313 | T7847 | T7851 | arg1Of | and,detectable |
R6318 | T7848 | T7847 | arg2Of | IKKγ,and |
R6320 | T7849 | T7843 | arg1Of | were,In |
R6327 | T7849 | T7845 | arg1Of | were,"," |
R6328 | T7849 | T7850 | arg1Of | were,not |
R6329 | T7849 | T7852 | arg1Of | were,in |
R6334 | T7851 | T7849 | arg2Of | detectable,were |
R6337 | T7854 | T7852 | arg2Of | immunoprecipitates,in |
R6346 | T7854 | T7853 | arg1Of | immunoprecipitates,CD40 |
R6347 | T7854 | T7855 | arg2Of | immunoprecipitates,recovered |
R6350 | T7855 | T7856 | arg1Of | recovered,from |
R6353 | T7858 | T7856 | arg2Of | cells,from |
R6361 | T7858 | T7857 | arg1Of | cells,HOIP-deficient |
R6362 | T7858 | T7859 | arg1Of | cells,( |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T7118 | 0-2 | IN | denotes | In |
T7119 | 3-11 | NN | denotes | contrast |
T7120 | 11-12 | , | denotes | , |
T7121 | 13-17 | NNP | denotes | IKKα |
T7122 | 17-18 | NNP | denotes | / |
T7123 | 18-19 | NN | denotes | β |
T7124 | 20-23 | CC | denotes | and |
T7125 | 24-28 | NNP | denotes | IKKγ |
T7126 | 29-33 | VBD | denotes | were |
T7127 | 34-37 | RB | denotes | not |
T7128 | 38-48 | JJ | denotes | detectable |
T7129 | 49-51 | IN | denotes | in |
T7130 | 52-56 | CD | denotes | CD40 |
T7131 | 57-75 | NNS | denotes | immunoprecipitates |
T7132 | 76-85 | VBD | denotes | recovered |
T7133 | 86-90 | IN | denotes | from |
T7134 | 91-105 | JJ | denotes | HOIP-deficient |
T7135 | 106-111 | NNS | denotes | cells |
T7136 | 112-113 | -LRB- | denotes | ( |
T7137 | 113-117 | NNP | denotes | Fig. |
T7138 | 118-120 | NNP | denotes | 5B |
T7139 | 120-121 | , | denotes | , |
T7140 | 121-122 | NNP | denotes | C |
T7141 | 122-123 | -RRB- | denotes | ) |
T7142 | 123-124 | . | denotes | . |
R5476 | T7118 | T7126 | prep | In,were |
R5477 | T7119 | T7118 | pobj | contrast,In |
R5478 | T7120 | T7126 | punct | ",",were |
R5479 | T7121 | T7123 | compound | IKKα,β |
R5480 | T7122 | T7123 | compound | /,β |
R5481 | T7123 | T7126 | nsubj | β,were |
R5482 | T7124 | T7123 | cc | and,β |
R5483 | T7125 | T7123 | conj | IKKγ,β |
R5484 | T7126 | T7126 | ROOT | were,were |
R5485 | T7127 | T7126 | neg | not,were |
R5486 | T7128 | T7126 | acomp | detectable,were |
R5487 | T7129 | T7128 | prep | in,detectable |
R5488 | T7130 | T7131 | nummod | CD40,immunoprecipitates |
R5489 | T7131 | T7129 | pobj | immunoprecipitates,in |
R5490 | T7132 | T7131 | acl | recovered,immunoprecipitates |
R5491 | T7133 | T7132 | prep | from,recovered |
R5492 | T7134 | T7135 | amod | HOIP-deficient,cells |
R5493 | T7135 | T7133 | pobj | cells,from |
R5494 | T7136 | T7132 | punct | (,recovered |
R5495 | T7137 | T7138 | compound | Fig.,5B |
R5496 | T7138 | T7138 | ROOT | 5B,5B |
R5497 | T7139 | T7140 | punct | ",",C |
R5498 | T7140 | T7138 | appos | C,5B |
R5499 | T7141 | T7138 | punct | ),5B |
R5500 | T7142 | T7132 | punct | .,recovered |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T6718 | 0-124 | Sentence | denotes | In contrast, IKKα/β and IKKγ were not detectable in CD40 immunoprecipitates recovered from HOIP-deficient cells (Fig. 5B,C). |
T137 | 0-124 | Sentence | denotes | In contrast, IKKα/β and IKKγ were not detectable in CD40 immunoprecipitates recovered from HOIP-deficient cells (Fig. 5B,C). |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T8237 | 52-56 | P25942 | denotes | CD40 |
T8238 | 91-95 | Q96EP0 | denotes | HOIP |
test2
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T6523 | 13-17 | Protein | denotes | IKKα |
T6524 | 18-19 | Protein | denotes | β |
T6525 | 24-28 | Protein | denotes | IKKγ |
T6526 | 52-56 | Protein | denotes | CD40 |
T6527 | 91-95 | Protein | denotes | HOIP |
T6528 | 96-105 | Negative_regulation | denotes | deficient |
R4979 | T6527 | T6528 | themeOf | HOIP,deficient |