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PMC:3148254 / 16387-16641 JSONTXT

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bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue Negation
T6616 21-29 Positive_regulation denotes increase
T6617 65-75 Binding denotes recognized
T6618 152-157 Regulation denotes alter true
T6619 192-196 Protein denotes HOIP
R5038 T6619 T6618 themeOf HOIP,alter

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T8639 79-97 Protein denotes anti-HOIP antibody
T8641 65-75 Binding denotes recognized
T8643 131-143 Protein denotes SMAC peptide
R6755 T8639 T8641 themeOf anti-HOIP antibody,recognized

events-check-again

Id Subject Object Predicate Lexical cue Negation
T8711 21-29 Positive_regulation denotes increase
T8712 65-75 Binding denotes recognized
T8713 152-157 Regulation denotes alter true
T8714 192-196 Protein denotes HOIP
R6771 T8714 T8713 themeOf HOIP,alter

bionlp-st-ge-2016-coref

Id Subject Object Predicate Lexical cue
T8182 57-64 Anaphor denotes species

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T7666 4-8 IN denotes with
T7667 9-11 DT denotes an
T7668 12-20 JJ denotes apparent
T7669 21-29 NN denotes increase
T7670 30-32 IN denotes in
T7671 33-39 JJ denotes higher
T7672 40-49 JJ denotes molecular
T7673 50-56 NN denotes weight
T7674 57-64 NN denotes species
T7675 65-75 VB denotes recognized
T7676 76-78 IN denotes by
T7677 79-88 JJ denotes anti-HOIP
T7678 89-97 NN denotes antibody
T7679 99-101 IN denotes In
T7680 102-110 NN denotes contrast
T7681 110-111 -COMMA- denotes ,
T7682 112-121 NN denotes treatment
T7683 122-126 IN denotes with
T7684 127-130 DT denotes the
T7685 131-135 NN denotes SMAC
T7686 136-143 NN denotes peptide
T7687 144-147 VB denotes did
T7688 148-151 RB denotes not
T7689 152-157 VB denotes alter
T7690 158-161 DT denotes the
T7691 162-168 NN denotes amount
T7692 169-171 CC denotes or
T7693 172-181 JJ denotes molecular
T7694 182-188 NN denotes weight
T7695 189-191 IN denotes of
T7696 192-196 NN denotes HOIP
T7697 197-204 JJ denotes present
T7698 205-207 IN denotes in
T7699 208-212 NN denotes cell
T7700 213-220 NN denotes lysates
T7701 222-227 DT denotes These
T7702 228-232 NN denotes data
T7703 233-240 VB denotes suggest
T7704 241-245 IN denotes that
T7705 246-250 NN denotes SMAC
R6022 T7669 T7666 arg2Of increase,with
R6023 T7669 T7667 arg1Of increase,an
R6024 T7669 T7668 arg1Of increase,apparent
R6025 T7669 T7670 arg1Of increase,in
R6026 T7674 T7670 arg2Of species,in
R6027 T7674 T7671 arg1Of species,higher
R6028 T7674 T7672 arg1Of species,molecular
R6029 T7674 T7673 arg1Of species,weight
R6030 T7674 T7675 arg2Of species,recognized
R6031 T7678 T7675 arg1Of antibody,recognized
R6032 T7678 T7676 arg2Of antibody,by
R6033 T7678 T7677 arg1Of antibody,anti-HOIP
R6034 T7680 T7679 arg2Of contrast,In
R6035 T7682 T7683 arg1Of treatment,with
R6036 T7682 T7687 arg1Of treatment,did
R6037 T7682 T7689 arg1Of treatment,alter
R6038 T7686 T7683 arg2Of peptide,with
R6039 T7686 T7684 arg1Of peptide,the
R6040 T7686 T7685 arg1Of peptide,SMAC
R6041 T7689 T7679 arg1Of alter,In
R6042 T7689 T7681 arg1Of alter,","
R6043 T7689 T7687 arg2Of alter,did
R6044 T7689 T7688 arg1Of alter,not
R6045 T7691 T7692 arg1Of amount,or
R6046 T7692 T7689 arg2Of or,alter
R6047 T7692 T7690 arg1Of or,the
R6048 T7692 T7695 arg1Of or,of
R6049 T7692 T7697 arg1Of or,present
R6050 T7694 T7692 arg2Of weight,or
R6051 T7694 T7693 arg1Of weight,molecular
R6052 T7696 T7695 arg2Of HOIP,of
R6053 T7697 T7698 arg1Of present,in
R6054 T7700 T7698 arg2Of lysates,in
R6055 T7700 T7699 arg1Of lysates,cell
R6056 T7702 T7701 arg1Of data,These
R6057 T7702 T7703 arg1Of data,suggest

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T6928 4-8 IN denotes with
T6929 9-11 DT denotes an
T6930 12-20 JJ denotes apparent
T6931 21-29 NN denotes increase
T6932 30-32 IN denotes in
T6933 33-39 JJR denotes higher
T6934 40-49 JJ denotes molecular
T6935 50-56 NN denotes weight
T6936 57-64 NNS denotes species
T6937 65-75 VBN denotes recognized
T6938 76-78 IN denotes by
T6939 79-88 JJ denotes anti-HOIP
T6940 89-97 NN denotes antibody
T6941 97-98 . denotes .
T6942 99-101 IN denotes In
T6943 102-110 NN denotes contrast
T6944 110-111 , denotes ,
T6945 112-121 NN denotes treatment
T6946 122-126 IN denotes with
T6947 127-130 DT denotes the
T6948 131-135 NNP denotes SMAC
T6949 136-143 NN denotes peptide
T6950 144-147 VBD denotes did
T6951 148-151 RB denotes not
T6952 152-157 VB denotes alter
T6953 158-161 DT denotes the
T6954 162-168 NN denotes amount
T6955 169-171 CC denotes or
T6956 172-181 JJ denotes molecular
T6957 182-188 NN denotes weight
T6958 189-191 IN denotes of
T6959 192-196 NNP denotes HOIP
T6960 197-204 NN denotes present
T6961 205-207 IN denotes in
T6962 208-212 NN denotes cell
T6963 213-220 NNS denotes lysates
T6964 220-221 . denotes .
T6965 222-227 DT denotes These
T6966 228-232 NNS denotes data
T6967 233-240 VBP denotes suggest
T6968 241-245 IN denotes that
T6969 246-250 NNP denotes SMAC
R5287 T6929 T6931 det an,increase
R5288 T6930 T6931 amod apparent,increase
R5289 T6931 T6928 pobj increase,with
R5290 T6932 T6931 prep in,increase
R5291 T6933 T6936 amod higher,species
R5292 T6934 T6936 amod molecular,species
R5293 T6935 T6936 compound weight,species
R5294 T6936 T6932 pobj species,in
R5295 T6937 T6936 acl recognized,species
R5296 T6938 T6937 agent by,recognized
R5297 T6939 T6940 amod anti-HOIP,antibody
R5298 T6940 T6938 pobj antibody,by
R5300 T6942 T6952 prep In,alter
R5301 T6943 T6942 pobj contrast,In
R5302 T6944 T6952 punct ",",alter
R5303 T6945 T6952 nsubj treatment,alter
R5304 T6946 T6945 prep with,treatment
R5305 T6947 T6949 det the,peptide
R5306 T6948 T6949 compound SMAC,peptide
R5307 T6949 T6946 pobj peptide,with
R5308 T6950 T6952 aux did,alter
R5309 T6951 T6952 neg not,alter
R5310 T6952 T6952 ROOT alter,alter
R5311 T6953 T6954 det the,amount
R5312 T6954 T6952 dobj amount,alter
R5313 T6955 T6954 cc or,amount
R5314 T6956 T6957 amod molecular,weight
R5315 T6957 T6954 conj weight,amount
R5316 T6958 T6954 prep of,amount
R5317 T6959 T6960 compound HOIP,present
R5318 T6960 T6958 pobj present,of
R5319 T6961 T6960 prep in,present
R5320 T6962 T6963 compound cell,lysates
R5321 T6963 T6961 pobj lysates,in
R5322 T6964 T6952 punct .,alter
R5323 T6965 T6966 det These,data
R5324 T6966 T6967 nsubj data,suggest
R5325 T6967 T6967 ROOT suggest,suggest

GO-MF

Id Subject Object Predicate Lexical cue
T8307 89-97 http://purl.obolibrary.org/obo/GO_0003823 denotes antibody

GO-CC

Id Subject Object Predicate Lexical cue
T8313 208-212 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T8319 89-97 http://purl.obolibrary.org/obo/GO_0019815 denotes antibody
T8322 89-97 http://purl.obolibrary.org/obo/GO_0042571 denotes antibody

sentences

Id Subject Object Predicate Lexical cue
T6712 99-221 Sentence denotes In contrast, treatment with the SMAC peptide did not alter the amount or molecular weight of HOIP present in cell lysates.
T114 99-221 Sentence denotes In contrast, treatment with the SMAC peptide did not alter the amount or molecular weight of HOIP present in cell lysates.

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T8213 84-88 Q96EP0 denotes HOIP
T8214 192-196 Q96EP0 denotes HOIP

test2

Id Subject Object Predicate Lexical cue Negation
T6486 152-157 Regulation denotes alter
T6487 192-196 Protein denotes HOIP true