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PMC:3148254 / 15654-15793 JSONTXT

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bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T6589 35-40 Protein denotes TRAF2
T6590 41-51 Binding denotes associated
T6591 41-51 Binding denotes associated
T6592 61-66 Protein denotes cIAP1
T6593 71-76 Protein denotes cIAP2
T6594 84-88 Regulation denotes role
T6595 84-88 Regulation denotes role
T6596 84-88 Regulation denotes role
T6597 84-88 Regulation denotes role
T6598 96-107 Binding denotes recruitment
T6599 96-107 Binding denotes recruitment
T6600 111-115 Protein denotes HOIP
T6601 119-124 Protein denotes TNFR1
T6602 129-133 Protein denotes CD40
R5010 T6589 T6590 themeOf TRAF2,associated
R5011 T6589 T6591 themeOf TRAF2,associated
R5012 T6592 T6590 themeOf cIAP1,associated
R5013 T6592 T6597 causeOf cIAP1,role
R5014 T6592 T6596 causeOf cIAP1,role
R5015 T6593 T6591 themeOf cIAP2,associated
R5016 T6593 T6594 causeOf cIAP2,role
R5017 T6593 T6595 causeOf cIAP2,role
R5018 T6598 T6597 themeOf recruitment,role
R5019 T6598 T6594 themeOf recruitment,role
R5020 T6599 T6596 themeOf recruitment,role
R5021 T6599 T6595 themeOf recruitment,role
R5022 T6600 T6598 themeOf HOIP,recruitment
R5023 T6600 T6599 themeOf HOIP,recruitment
R5024 T6601 T6598 themeOf TNFR1,recruitment
R5025 T6602 T6599 themeOf CD40,recruitment

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T8622 35-40 Protein denotes TRAF2
T8623 61-66 Protein denotes cIAP1
T8624 71-76 Protein denotes cIAP2
T8625 111-115 Protein denotes HOIP
T8626 119-124 Protein denotes TNFR1
T8627 96-107 Binding denotes recruitment
R6724 T8625 T8627 themeOf HOIP,recruitment
R6744 T8626 T8627 themeOf TNFR1,recruitment

events-check-again

Id Subject Object Predicate Lexical cue
T8601 35-40 Protein denotes TRAF2
T8602 41-51 Binding denotes associated
T8603 41-51 Binding denotes associated
T8604 61-66 Protein denotes cIAP1
T8605 71-76 Protein denotes cIAP2
T8606 84-88 Regulation denotes role
T8607 84-88 Regulation denotes role
T8608 84-88 Regulation denotes role
T8609 84-88 Regulation denotes role
T8610 96-107 Binding denotes recruitment
T8611 96-107 Binding denotes recruitment
T8612 111-115 Protein denotes HOIP
T8696 119-124 Protein denotes TNFR1
T8697 129-133 Protein denotes CD40
R6730 T8601 T8602 themeOf TRAF2,associated
R6731 T8601 T8603 themeOf TRAF2,associated
R6732 T8604 T8602 themeOf cIAP1,associated
R6733 T8604 T8609 causeOf cIAP1,role
R6734 T8604 T8608 causeOf cIAP1,role
R6735 T8605 T8603 themeOf cIAP2,associated
R6736 T8605 T8606 causeOf cIAP2,role
R6737 T8605 T8607 causeOf cIAP2,role
R6738 T8610 T8609 themeOf recruitment,role
R6739 T8610 T8606 themeOf recruitment,role
R6740 T8611 T8608 themeOf recruitment,role
R6741 T8611 T8607 themeOf recruitment,role
R6742 T8612 T8610 themeOf HOIP,recruitment
R6743 T8612 T8611 themeOf HOIP,recruitment
R6754 T8696 T8610 themeOf TNFR1,recruitment
R6756 T8697 T8611 themeOf CD40,recruitment

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T7543 0-7 NN denotes Studies
T7544 8-10 IN denotes by
T7545 11-17 NN denotes others
T7546 18-25 VB denotes suggest
T7547 26-30 IN denotes that
T7548 31-34 DT denotes the
T7549 35-51 JJ denotes TRAF2-associated
T7550 52-60 NN denotes proteins
T7551 61-66 NN denotes cIAP1
T7552 67-70 CC denotes and
T7553 71-76 NN denotes cIAP2
T7554 77-81 VB denotes play
T7555 82-83 DT denotes a
T7556 84-88 NN denotes role
T7557 89-91 IN denotes in
T7558 92-95 DT denotes the
T7559 96-107 NN denotes recruitment
T7560 108-110 IN denotes of
T7561 111-115 NN denotes HOIP
T7562 116-118 TO denotes to
T7563 119-124 NN denotes TNFR1
T7564 125-128 CC denotes and
T7565 129-133 NN denotes CD40
T7566 134-135 -LRB- denotes [
T7567 135-137 CD denotes 14
T7568 137-138 -RRB- denotes ]
R5900 T7543 T7544 arg1Of Studies,by
R5901 T7543 T7546 arg1Of Studies,suggest
R5902 T7545 T7544 arg2Of others,by
R5903 T7550 T7548 arg1Of proteins,the
R5904 T7550 T7549 arg1Of proteins,TRAF2-associated
R5905 T7551 T7552 arg1Of cIAP1,and
R5906 T7552 T7550 arg1Of and,proteins
R5907 T7552 T7554 arg1Of and,play
R5908 T7553 T7552 arg2Of cIAP2,and
R5909 T7554 T7546 arg2Of play,suggest
R5910 T7554 T7547 arg1Of play,that
R5911 T7554 T7557 arg1Of play,in
R5912 T7554 T7566 arg1Of play,[
R5913 T7556 T7554 arg2Of role,play
R5914 T7556 T7555 arg1Of role,a
R5915 T7559 T7557 arg2Of recruitment,in
R5916 T7559 T7558 arg1Of recruitment,the
R5917 T7559 T7560 arg1Of recruitment,of
R5918 T7559 T7562 arg1Of recruitment,to
R5919 T7561 T7560 arg2Of HOIP,of
R5920 T7563 T7564 arg1Of TNFR1,and
R5921 T7564 T7562 arg2Of and,to
R5922 T7565 T7564 arg2Of CD40,and
R5923 T7567 T7566 arg2Of 14,[
R5924 T7568 T7566 arg3Of ],[

2_test

Id Subject Object Predicate Lexical cue
21829693-21455173-89653770 135-137 21455173 denotes 14
T83759 135-137 21455173 denotes 14

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T6800 0-7 NNS denotes Studies
T6801 8-10 IN denotes by
T6802 11-17 NNS denotes others
T6803 18-25 VBP denotes suggest
T6804 26-30 IN denotes that
T6805 31-34 DT denotes the
T6806 35-51 JJ denotes TRAF2-associated
T6807 52-60 NNS denotes proteins
T6808 61-66 JJ denotes cIAP1
T6809 67-70 CC denotes and
T6810 71-76 JJ denotes cIAP2
T6811 77-81 NN denotes play
T6812 82-83 DT denotes a
T6813 84-88 NN denotes role
T6814 89-91 IN denotes in
T6815 92-95 DT denotes the
T6816 96-107 NN denotes recruitment
T6817 108-110 IN denotes of
T6818 111-115 NNP denotes HOIP
T6819 116-118 TO denotes to
T6820 119-124 CD denotes TNFR1
T6821 125-128 CC denotes and
T6822 129-133 CD denotes CD40
T6823 134-135 NNP denotes [
T6824 135-137 CD denotes 14
T6825 137-138 NNP denotes ]
T6826 138-139 . denotes .
R5158 T6800 T6803 nsubj Studies,suggest
R5159 T6801 T6800 prep by,Studies
R5160 T6802 T6801 pobj others,by
R5161 T6803 T6803 ROOT suggest,suggest
R5162 T6804 T6808 mark that,cIAP1
R5163 T6805 T6807 det the,proteins
R5164 T6806 T6807 amod TRAF2-associated,proteins
R5165 T6807 T6808 nsubj proteins,cIAP1
R5166 T6808 T6803 ccomp cIAP1,suggest
R5167 T6809 T6808 cc and,cIAP1
R5168 T6810 T6808 conj cIAP2,cIAP1
R5169 T6811 T6803 conj play,suggest
R5170 T6812 T6813 det a,role
R5171 T6813 T6811 dobj role,play
R5172 T6814 T6813 prep in,role
R5173 T6815 T6816 det the,recruitment
R5174 T6816 T6814 pobj recruitment,in
R5175 T6817 T6816 prep of,recruitment
R5176 T6818 T6817 pobj HOIP,of
R5177 T6819 T6813 prep to,role
R5178 T6820 T6819 pobj TNFR1,to
R5179 T6821 T6820 cc and,TNFR1
R5180 T6822 T6820 conj CD40,TNFR1
R5181 T6823 T6825 nmod [,]
R5182 T6824 T6825 nummod 14,]
R5183 T6825 T6819 pobj ],to
R5184 T6826 T6803 punct .,suggest

sentences

Id Subject Object Predicate Lexical cue
T6708 0-139 Sentence denotes Studies by others suggest that the TRAF2-associated proteins cIAP1 and cIAP2 play a role in the recruitment of HOIP to TNFR1 and CD40 [14].
T110 0-139 Sentence denotes Studies by others suggest that the TRAF2-associated proteins cIAP1 and cIAP2 play a role in the recruitment of HOIP to TNFR1 and CD40 [14].

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T8201 35-40 Q12933 denotes TRAF2
T8202 61-66 Q13490 denotes cIAP1
T8203 111-115 Q96EP0 denotes HOIP
T8204 129-133 P25942 denotes CD40

test2

Id Subject Object Predicate Lexical cue Speculation
T6466 35-40 Protein denotes TRAF2 true
T6467 41-51 Binding denotes associated
T6468 61-66 Protein denotes cIAP1
T6469 71-76 Protein denotes cIAP2
T6470 84-88 Regulation denotes role
T6471 96-107 Binding denotes recruitment
T6472 111-115 Protein denotes HOIP
T6473 119-124 Protein denotes TNFR1
T6474 129-133 Protein denotes CD40
R4936 T6466 T6470 causeOf TRAF2,role
R4937 T6466 T6467 themeOf TRAF2,associated
R4938 T6467 T6470 causeOf associated,role
R4939 T6468 T6470 causeOf cIAP1,role
R4940 T6468 T6467 themeOf cIAP1,associated
R4941 T6469 T6467 themeOf cIAP2,associated
R4942 T6469 T6470 causeOf cIAP2,role
R4943 T6471 T6470 themeOf recruitment,role
R4944 T6472 T6471 themeOf HOIP,recruitment
R4945 T6473 T6471 themeOf TNFR1,recruitment
R4946 T6474 T6471 themeOf CD40,recruitment