PMC:3148254 / 11222-11377
Annnotations
bionlp-st-ge-2016-reference
{"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T4232","span":{"begin":32,"end":35},"obj":"Protein"},{"id":"T4233","span":{"begin":36,"end":46},"obj":"Gene_expression"},{"id":"T4234","span":{"begin":64,"end":68},"obj":"Protein"},{"id":"T4235","span":{"begin":69,"end":78},"obj":"Negative_regulation"},{"id":"T4236","span":{"begin":150,"end":154},"obj":"Protein"}],"relations":[{"id":"R3244","pred":"themeOf","subj":"T4232","obj":"T4233"},{"id":"R3245","pred":"themeOf","subj":"T4234","obj":"T4235"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"In contrast, only low levels of GLε expression were detected in HOIP-deficient cells stimulated with either anti-CD40 antibody alone or anti-CD40 and IL-4."}
bionlp-st-ge-2016-reference-tees
{"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T5312","span":{"begin":113,"end":117},"obj":"Protein"},{"id":"T5313","span":{"begin":141,"end":145},"obj":"Protein"},{"id":"T5314","span":{"begin":150,"end":154},"obj":"Protein"}],"text":"In contrast, only low levels of GLε expression were detected in HOIP-deficient cells stimulated with either anti-CD40 antibody alone or anti-CD40 and IL-4."}
events-check-again
{"project":"events-check-again","denotations":[{"id":"T5375","span":{"begin":32,"end":35},"obj":"Protein"},{"id":"T5376","span":{"begin":36,"end":46},"obj":"Gene_expression"},{"id":"T5377","span":{"begin":64,"end":68},"obj":"Protein"},{"id":"T5378","span":{"begin":69,"end":78},"obj":"Negative_regulation"},{"id":"T5379","span":{"begin":150,"end":154},"obj":"Protein"}],"relations":[{"id":"R4146","pred":"themeOf","subj":"T5375","obj":"T5376"},{"id":"R4147","pred":"themeOf","subj":"T5377","obj":"T5378"}],"text":"In contrast, only low levels of GLε expression were detected in HOIP-deficient cells stimulated with either anti-CD40 antibody alone or anti-CD40 and IL-4."}
pmc-enju-pas
{"project":"pmc-enju-pas","denotations":[{"id":"T4942","span":{"begin":0,"end":2},"obj":"IN"},{"id":"T4943","span":{"begin":3,"end":11},"obj":"NN"},{"id":"T4944","span":{"begin":11,"end":12},"obj":"-COMMA-"},{"id":"T4945","span":{"begin":13,"end":17},"obj":"RB"},{"id":"T4946","span":{"begin":18,"end":21},"obj":"JJ"},{"id":"T4947","span":{"begin":22,"end":28},"obj":"NN"},{"id":"T4948","span":{"begin":29,"end":31},"obj":"IN"},{"id":"T4949","span":{"begin":32,"end":35},"obj":"NN"},{"id":"T4950","span":{"begin":36,"end":46},"obj":"NN"},{"id":"T4951","span":{"begin":47,"end":51},"obj":"VB"},{"id":"T4952","span":{"begin":52,"end":60},"obj":"VB"},{"id":"T4953","span":{"begin":61,"end":63},"obj":"IN"},{"id":"T4954","span":{"begin":64,"end":78},"obj":"JJ"},{"id":"T4955","span":{"begin":79,"end":84},"obj":"NN"},{"id":"T4956","span":{"begin":85,"end":95},"obj":"VB"},{"id":"T4957","span":{"begin":96,"end":100},"obj":"IN"},{"id":"T4958","span":{"begin":101,"end":107},"obj":"CC"},{"id":"T4959","span":{"begin":108,"end":117},"obj":"JJ"},{"id":"T4960","span":{"begin":118,"end":126},"obj":"NN"},{"id":"T4961","span":{"begin":127,"end":132},"obj":"RB"},{"id":"T4962","span":{"begin":133,"end":135},"obj":"CC"},{"id":"T4963","span":{"begin":136,"end":145},"obj":"NN"},{"id":"T4964","span":{"begin":146,"end":149},"obj":"CC"},{"id":"T4965","span":{"begin":150,"end":154},"obj":"NN"}],"relations":[{"id":"R3940","pred":"arg2Of","subj":"T4943","obj":"T4942"},{"id":"R3941","pred":"arg1Of","subj":"T4947","obj":"T4945"},{"id":"R3942","pred":"arg1Of","subj":"T4947","obj":"T4946"},{"id":"R3943","pred":"arg1Of","subj":"T4947","obj":"T4948"},{"id":"R3944","pred":"arg1Of","subj":"T4947","obj":"T4951"},{"id":"R3945","pred":"arg2Of","subj":"T4947","obj":"T4952"},{"id":"R3946","pred":"arg2Of","subj":"T4950","obj":"T4948"},{"id":"R3947","pred":"arg1Of","subj":"T4950","obj":"T4949"},{"id":"R3948","pred":"arg1Of","subj":"T4952","obj":"T4942"},{"id":"R3949","pred":"arg1Of","subj":"T4952","obj":"T4944"},{"id":"R3950","pred":"arg2Of","subj":"T4952","obj":"T4951"},{"id":"R3951","pred":"arg1Of","subj":"T4952","obj":"T4953"},{"id":"R3952","pred":"arg2Of","subj":"T4955","obj":"T4953"},{"id":"R3953","pred":"arg1Of","subj":"T4955","obj":"T4954"},{"id":"R3954","pred":"arg2Of","subj":"T4955","obj":"T4956"},{"id":"R3955","pred":"arg1Of","subj":"T4956","obj":"T4957"},{"id":"R3956","pred":"arg1Of","subj":"T4960","obj":"T4959"},{"id":"R3957","pred":"arg1Of","subj":"T4960","obj":"T4961"},{"id":"R3958","pred":"arg1Of","subj":"T4960","obj":"T4962"},{"id":"R3959","pred":"arg2Of","subj":"T4962","obj":"T4957"},{"id":"R3960","pred":"arg1Of","subj":"T4962","obj":"T4958"},{"id":"R3961","pred":"arg1Of","subj":"T4963","obj":"T4964"},{"id":"R3962","pred":"arg2Of","subj":"T4964","obj":"T4962"},{"id":"R3963","pred":"arg2Of","subj":"T4965","obj":"T4964"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"In contrast, only low levels of GLε expression were detected in HOIP-deficient cells stimulated with either anti-CD40 antibody alone or anti-CD40 and IL-4."}
bionlp-st-ge-2016-spacy-parsed
{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T4576","span":{"begin":0,"end":2},"obj":"IN"},{"id":"T4577","span":{"begin":3,"end":11},"obj":"NN"},{"id":"T4578","span":{"begin":11,"end":12},"obj":","},{"id":"T4579","span":{"begin":13,"end":17},"obj":"RB"},{"id":"T4580","span":{"begin":18,"end":21},"obj":"JJ"},{"id":"T4581","span":{"begin":22,"end":28},"obj":"NNS"},{"id":"T4582","span":{"begin":29,"end":31},"obj":"IN"},{"id":"T4583","span":{"begin":32,"end":35},"obj":"NNP"},{"id":"T4584","span":{"begin":36,"end":46},"obj":"NN"},{"id":"T4585","span":{"begin":47,"end":51},"obj":"VBD"},{"id":"T4586","span":{"begin":52,"end":60},"obj":"VBN"},{"id":"T4587","span":{"begin":61,"end":63},"obj":"IN"},{"id":"T4588","span":{"begin":64,"end":78},"obj":"JJ"},{"id":"T4589","span":{"begin":79,"end":84},"obj":"NNS"},{"id":"T4590","span":{"begin":85,"end":95},"obj":"VBN"},{"id":"T4591","span":{"begin":96,"end":100},"obj":"IN"},{"id":"T4592","span":{"begin":101,"end":107},"obj":"DT"},{"id":"T4593","span":{"begin":108,"end":117},"obj":"JJ"},{"id":"T4594","span":{"begin":118,"end":126},"obj":"NN"},{"id":"T4595","span":{"begin":127,"end":132},"obj":"RB"},{"id":"T4596","span":{"begin":133,"end":135},"obj":"CC"},{"id":"T4597","span":{"begin":136,"end":145},"obj":"JJ"},{"id":"T4598","span":{"begin":146,"end":149},"obj":"CC"},{"id":"T4599","span":{"begin":150,"end":154},"obj":"NN"},{"id":"T4600","span":{"begin":154,"end":155},"obj":"."}],"relations":[{"id":"R3566","pred":"prep","subj":"T4576","obj":"T4586"},{"id":"R3567","pred":"pobj","subj":"T4577","obj":"T4576"},{"id":"R3568","pred":"punct","subj":"T4578","obj":"T4586"},{"id":"R3569","pred":"advmod","subj":"T4579","obj":"T4581"},{"id":"R3570","pred":"amod","subj":"T4580","obj":"T4581"},{"id":"R3571","pred":"nsubjpass","subj":"T4581","obj":"T4586"},{"id":"R3572","pred":"prep","subj":"T4582","obj":"T4581"},{"id":"R3573","pred":"compound","subj":"T4583","obj":"T4584"},{"id":"R3574","pred":"pobj","subj":"T4584","obj":"T4582"},{"id":"R3575","pred":"auxpass","subj":"T4585","obj":"T4586"},{"id":"R3576","pred":"ROOT","subj":"T4586","obj":"T4586"},{"id":"R3577","pred":"prep","subj":"T4587","obj":"T4586"},{"id":"R3578","pred":"amod","subj":"T4588","obj":"T4589"},{"id":"R3579","pred":"pobj","subj":"T4589","obj":"T4587"},{"id":"R3580","pred":"conj","subj":"T4590","obj":"T4586"},{"id":"R3581","pred":"prep","subj":"T4591","obj":"T4590"},{"id":"R3582","pred":"det","subj":"T4592","obj":"T4594"},{"id":"R3583","pred":"amod","subj":"T4593","obj":"T4594"},{"id":"R3584","pred":"pobj","subj":"T4594","obj":"T4591"},{"id":"R3585","pred":"advmod","subj":"T4595","obj":"T4594"},{"id":"R3586","pred":"cc","subj":"T4596","obj":"T4594"},{"id":"R3587","pred":"conj","subj":"T4597","obj":"T4594"},{"id":"R3588","pred":"cc","subj":"T4598","obj":"T4597"},{"id":"R3589","pred":"conj","subj":"T4599","obj":"T4597"},{"id":"R3590","pred":"punct","subj":"T4600","obj":"T4586"}],"text":"In contrast, only low levels of GLε expression were detected in HOIP-deficient cells stimulated with either anti-CD40 antibody alone or anti-CD40 and IL-4."}
GO-MF
{"project":"GO-MF","denotations":[{"id":"T5090","span":{"begin":118,"end":126},"obj":"http://purl.obolibrary.org/obo/GO_0003823"},{"id":"T5095","span":{"begin":150,"end":154},"obj":"http://purl.obolibrary.org/obo/GO_0005136"}],"text":"In contrast, only low levels of GLε expression were detected in HOIP-deficient cells stimulated with either anti-CD40 antibody alone or anti-CD40 and IL-4."}
GO-CC
{"project":"GO-CC","denotations":[{"id":"T5107","span":{"begin":79,"end":84},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T5113","span":{"begin":118,"end":126},"obj":"http://purl.obolibrary.org/obo/GO_0019815"},{"id":"T5117","span":{"begin":118,"end":126},"obj":"http://purl.obolibrary.org/obo/GO_0042571"}],"text":"In contrast, only low levels of GLε expression were detected in HOIP-deficient cells stimulated with either anti-CD40 antibody alone or anti-CD40 and IL-4."}
sentences
{"project":"sentences","denotations":[{"id":"T4256","span":{"begin":0,"end":155},"obj":"Sentence"},{"id":"T77","span":{"begin":0,"end":155},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"In contrast, only low levels of GLε expression were detected in HOIP-deficient cells stimulated with either anti-CD40 antibody alone or anti-CD40 and IL-4."}
bionlp-st-ge-2016-uniprot
{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T5044","span":{"begin":32,"end":35},"obj":"Q28322"},{"id":"T5045","span":{"begin":64,"end":68},"obj":"Q96EP0"},{"id":"T5046","span":{"begin":113,"end":117},"obj":"P25942"},{"id":"T5047","span":{"begin":141,"end":145},"obj":"P25942"},{"id":"T5048","span":{"begin":150,"end":154},"obj":"P05112"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"In contrast, only low levels of GLε expression were detected in HOIP-deficient cells stimulated with either anti-CD40 antibody alone or anti-CD40 and IL-4."}
test2
{"project":"test2","denotations":[{"id":"T4161","span":{"begin":32,"end":35},"obj":"Protein"},{"id":"T4162","span":{"begin":36,"end":46},"obj":"Gene_expression"},{"id":"T4163","span":{"begin":64,"end":68},"obj":"Protein"},{"id":"T4164","span":{"begin":69,"end":78},"obj":"Negative_regulation"},{"id":"T4165","span":{"begin":150,"end":154},"obj":"Protein"}],"relations":[{"id":"R3201","pred":"themeOf","subj":"T4161","obj":"T4162"},{"id":"R3202","pred":"themeOf","subj":"T4163","obj":"T4164"}],"text":"In contrast, only low levels of GLε expression were detected in HOIP-deficient cells stimulated with either anti-CD40 antibody alone or anti-CD40 and IL-4."}