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PMC:3148254 / 10239-10373 JSONTXT

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bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T4219 0-4 Protein denotes CD40

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T5289 0-4 Protein denotes CD40
T5290 90-104 Protein denotes immunoglobulin

events-check-again

Id Subject Object Predicate Lexical cue
T5362 0-4 Protein denotes CD40

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T4768 0-4 NN denotes CD40
T4769 5-12 NN denotes signals
T4770 13-15 IN denotes in
T4771 16-17 NN denotes B
T4772 18-23 NN denotes cells
T4773 24-27 MD denotes can
T4774 28-32 RB denotes also
T4775 33-43 VB denotes contribute
T4776 44-46 TO denotes to
T4777 47-50 DT denotes the
T4778 51-61 NN denotes activation
T4779 62-64 IN denotes of
T4780 65-68 NN denotes DNA
T4781 69-82 NN denotes recombination
T4782 83-85 IN denotes in
T4783 86-89 DT denotes the
T4784 90-104 NN denotes immunoglobulin
T4785 105-110 JJ denotes heavy
T4786 111-116 NN denotes chain
T4787 117-122 NN denotes locus
T4788 123-124 -LRB- denotes [
T4789 124-126 CD denotes 11
T4790 126-127 -RRB- denotes ]
T4791 127-128 -COMMA- denotes ,
T4792 129-130 -LRB- denotes [
T4793 130-132 CD denotes 12
T4794 132-133 -RRB- denotes ]
R3761 T4769 T4768 arg1Of signals,CD40
R3762 T4769 T4770 arg1Of signals,in
R3763 T4769 T4773 arg1Of signals,can
R3764 T4769 T4775 arg1Of signals,contribute
R3765 T4772 T4770 arg2Of cells,in
R3766 T4772 T4771 arg1Of cells,B
R3767 T4775 T4773 arg2Of contribute,can
R3768 T4775 T4774 arg1Of contribute,also
R3769 T4775 T4776 arg1Of contribute,to
R3770 T4775 T4791 arg1Of contribute,","
R3771 T4775 T4792 arg1Of contribute,[
R3772 T4778 T4776 arg2Of activation,to
R3773 T4778 T4777 arg1Of activation,the
R3774 T4778 T4779 arg1Of activation,of
R3775 T4778 T4782 arg1Of activation,in
R3776 T4781 T4779 arg2Of recombination,of
R3777 T4781 T4780 arg1Of recombination,DNA
R3778 T4787 T4782 arg2Of locus,in
R3779 T4787 T4783 arg1Of locus,the
R3780 T4787 T4784 arg1Of locus,immunoglobulin
R3781 T4787 T4785 arg1Of locus,heavy
R3782 T4787 T4786 arg1Of locus,chain
R3783 T4787 T4788 arg1Of locus,[
R3784 T4789 T4788 arg2Of 11,[
R3785 T4790 T4788 arg3Of ],[
R3786 T4793 T4792 arg2Of 12,[
R3787 T4794 T4792 arg3Of ],[

2_test

Id Subject Object Predicate Lexical cue
21829693-7681587-89653763 124-126 7681587 denotes 11
21829693-1701824-89653764 130-132 1701824 denotes 12
T18517 124-126 7681587 denotes 11
T73302 130-132 1701824 denotes 12

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T4394 0-4 CD denotes CD40
T4395 5-12 NNS denotes signals
T4396 13-15 IN denotes in
T4397 16-17 NNP denotes B
T4398 18-23 NNS denotes cells
T4399 24-27 MD denotes can
T4400 28-32 RB denotes also
T4401 33-43 VB denotes contribute
T4402 44-46 TO denotes to
T4403 47-50 DT denotes the
T4404 51-61 NN denotes activation
T4405 62-64 IN denotes of
T4406 65-68 NNP denotes DNA
T4407 69-82 NN denotes recombination
T4408 83-85 IN denotes in
T4409 86-89 DT denotes the
T4410 90-104 NN denotes immunoglobulin
T4411 105-110 JJ denotes heavy
T4412 111-116 NN denotes chain
T4413 117-122 NN denotes locus
T4414 123-124 NNP denotes [
T4415 124-126 CD denotes 11
T4416 126-127 NNP denotes ]
T4417 127-128 , denotes ,
T4418 129-130 NNP denotes [
T4419 130-132 CD denotes 12
T4420 132-133 NNP denotes ]
T4421 133-134 . denotes .
R3384 T4394 T4395 nummod CD40,signals
R3385 T4395 T4401 nsubj signals,contribute
R3386 T4396 T4395 prep in,signals
R3387 T4397 T4398 compound B,cells
R3388 T4398 T4396 pobj cells,in
R3389 T4399 T4401 aux can,contribute
R3390 T4400 T4401 advmod also,contribute
R3391 T4401 T4401 ROOT contribute,contribute
R3392 T4402 T4401 prep to,contribute
R3393 T4403 T4404 det the,activation
R3394 T4404 T4402 pobj activation,to
R3395 T4405 T4404 prep of,activation
R3396 T4406 T4407 compound DNA,recombination
R3397 T4407 T4405 pobj recombination,of
R3398 T4408 T4404 prep in,activation
R3399 T4409 T4413 det the,locus
R3400 T4410 T4413 compound immunoglobulin,locus
R3401 T4411 T4412 amod heavy,chain
R3402 T4412 T4413 compound chain,locus
R3403 T4413 T4408 pobj locus,in
R3404 T4414 T4416 compound [,]
R3405 T4415 T4416 compound 11,]
R3406 T4416 T4404 appos ],activation
R3407 T4417 T4416 punct ",",]
R3408 T4418 T4420 nmod [,]
R3409 T4419 T4420 nummod 12,]
R3410 T4420 T4416 appos ],]
R3411 T4421 T4401 punct .,contribute

GO-BP

Id Subject Object Predicate Lexical cue
T5076 51-82 http://purl.obolibrary.org/obo/GO_0045911 denotes activation of DNA recombination
T5077 65-82 http://purl.obolibrary.org/obo/GO_0006310 denotes DNA recombination

GO-MF

Id Subject Object Predicate Lexical cue
T5086 90-104 http://purl.obolibrary.org/obo/GO_0003823 denotes immunoglobulin

GO-CC

Id Subject Object Predicate Lexical cue
T5104 18-23 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T4250 0-134 Sentence denotes CD40 signals in B cells can also contribute to the activation of DNA recombination in the immunoglobulin heavy chain locus [11], [12].
T71 0-134 Sentence denotes CD40 signals in B cells can also contribute to the activation of DNA recombination in the immunoglobulin heavy chain locus [11], [12].

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T5023 0-4 P25942 denotes CD40
T5024 90-116 P01860 denotes immunoglobulin heavy chain
T5025 90-116 P01877 denotes immunoglobulin heavy chain
T5026 90-116 P01871 denotes immunoglobulin heavy chain
T5027 90-116 P01876 denotes immunoglobulin heavy chain
T5028 90-116 P01859 denotes immunoglobulin heavy chain
T5029 90-116 P01861 denotes immunoglobulin heavy chain
T5030 90-116 P01854 denotes immunoglobulin heavy chain
T5031 90-116 P01857 denotes immunoglobulin heavy chain
T5032 90-116 P01880 denotes immunoglobulin heavy chain

test2

Id Subject Object Predicate Lexical cue
T4147 0-4 Protein denotes CD40