PMC:3062687 / 761-937 JSONTXT

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    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T248","span":{"begin":10,"end":14},"obj":"O14920"},{"id":"T249","span":{"begin":66,"end":70},"obj":"P23396"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"Thus, the IKKβ-dependent modification of a specific amino acid in RPS3 promotes specific NF-κB functions that underlie the molecular pathogenetic mechanisms of E. coli O157:H7."}

    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T211","span":{"begin":0,"end":4},"obj":"RB"},{"id":"T212","span":{"begin":4,"end":5},"obj":"-COMMA-"},{"id":"T213","span":{"begin":6,"end":9},"obj":"DT"},{"id":"T214","span":{"begin":10,"end":24},"obj":"JJ"},{"id":"T215","span":{"begin":25,"end":37},"obj":"NN"},{"id":"T216","span":{"begin":38,"end":40},"obj":"IN"},{"id":"T217","span":{"begin":41,"end":42},"obj":"DT"},{"id":"T218","span":{"begin":43,"end":51},"obj":"JJ"},{"id":"T219","span":{"begin":52,"end":57},"obj":"NN"},{"id":"T220","span":{"begin":58,"end":62},"obj":"NN"},{"id":"T221","span":{"begin":63,"end":65},"obj":"IN"},{"id":"T222","span":{"begin":66,"end":70},"obj":"NN"},{"id":"T223","span":{"begin":71,"end":79},"obj":"VB"},{"id":"T224","span":{"begin":80,"end":88},"obj":"JJ"},{"id":"T225","span":{"begin":89,"end":94},"obj":"NN"},{"id":"T226","span":{"begin":95,"end":104},"obj":"NN"},{"id":"T227","span":{"begin":105,"end":109},"obj":"WDT"},{"id":"T228","span":{"begin":110,"end":118},"obj":"VB"},{"id":"T229","span":{"begin":119,"end":122},"obj":"DT"},{"id":"T230","span":{"begin":123,"end":132},"obj":"JJ"},{"id":"T231","span":{"begin":133,"end":145},"obj":"JJ"},{"id":"T232","span":{"begin":146,"end":156},"obj":"NN"},{"id":"T233","span":{"begin":157,"end":159},"obj":"IN"},{"id":"T234","span":{"begin":160,"end":162},"obj":"FW"},{"id":"T235","span":{"begin":163,"end":167},"obj":"FW"},{"id":"T236","span":{"begin":168,"end":172},"obj":"NN"},{"id":"T237","span":{"begin":172,"end":173},"obj":"-COLON-"},{"id":"T238","span":{"begin":173,"end":175},"obj":"NN"}],"relations":[{"id":"R191","pred":"arg1Of","subj":"T215","obj":"T213"},{"id":"R192","pred":"arg1Of","subj":"T215","obj":"T214"},{"id":"R193","pred":"arg1Of","subj":"T215","obj":"T216"},{"id":"R194","pred":"arg1Of","subj":"T215","obj":"T223"},{"id":"R195","pred":"arg2Of","subj":"T220","obj":"T216"},{"id":"R196","pred":"arg1Of","subj":"T220","obj":"T217"},{"id":"R197","pred":"arg1Of","subj":"T220","obj":"T218"},{"id":"R198","pred":"arg1Of","subj":"T220","obj":"T219"},{"id":"R199","pred":"arg1Of","subj":"T220","obj":"T221"},{"id":"R200","pred":"arg2Of","subj":"T222","obj":"T221"},{"id":"R201","pred":"arg1Of","subj":"T223","obj":"T211"},{"id":"R202","pred":"arg1Of","subj":"T223","obj":"T212"},{"id":"R203","pred":"arg2Of","subj":"T226","obj":"T223"},{"id":"R204","pred":"arg1Of","subj":"T226","obj":"T224"},{"id":"R205","pred":"arg1Of","subj":"T226","obj":"T225"},{"id":"R206","pred":"arg1Of","subj":"T226","obj":"T227"},{"id":"R207","pred":"arg1Of","subj":"T226","obj":"T228"},{"id":"R208","pred":"arg2Of","subj":"T232","obj":"T228"},{"id":"R209","pred":"arg1Of","subj":"T232","obj":"T229"},{"id":"R210","pred":"arg1Of","subj":"T232","obj":"T230"},{"id":"R211","pred":"arg1Of","subj":"T232","obj":"T231"},{"id":"R212","pred":"arg1Of","subj":"T232","obj":"T233"},{"id":"R213","pred":"arg1Of","subj":"T232","obj":"T237"},{"id":"R214","pred":"arg2Of","subj":"T236","obj":"T233"},{"id":"R215","pred":"arg1Of","subj":"T236","obj":"T234"},{"id":"R216","pred":"arg1Of","subj":"T236","obj":"T235"},{"id":"R217","pred":"arg2Of","subj":"T238","obj":"T237"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"Thus, the IKKβ-dependent modification of a specific amino acid in RPS3 promotes specific NF-κB functions that underlie the molecular pathogenetic mechanisms of E. coli O157:H7."}

    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T365","span":{"begin":0,"end":4},"obj":"RB"},{"id":"T366","span":{"begin":4,"end":5},"obj":","},{"id":"T367","span":{"begin":6,"end":9},"obj":"DT"},{"id":"T368","span":{"begin":10,"end":24},"obj":"JJ"},{"id":"T369","span":{"begin":25,"end":37},"obj":"NN"},{"id":"T370","span":{"begin":38,"end":40},"obj":"IN"},{"id":"T371","span":{"begin":41,"end":42},"obj":"DT"},{"id":"T372","span":{"begin":43,"end":51},"obj":"JJ"},{"id":"T373","span":{"begin":52,"end":57},"obj":"JJ"},{"id":"T374","span":{"begin":58,"end":62},"obj":"NN"},{"id":"T375","span":{"begin":63,"end":65},"obj":"IN"},{"id":"T376","span":{"begin":66,"end":70},"obj":"CD"},{"id":"T377","span":{"begin":71,"end":79},"obj":"VBZ"},{"id":"T378","span":{"begin":80,"end":88},"obj":"JJ"},{"id":"T379","span":{"begin":89,"end":94},"obj":"NN"},{"id":"T380","span":{"begin":95,"end":104},"obj":"NNS"},{"id":"T381","span":{"begin":105,"end":109},"obj":"WDT"},{"id":"T382","span":{"begin":110,"end":118},"obj":"VBP"},{"id":"T383","span":{"begin":119,"end":122},"obj":"DT"},{"id":"T384","span":{"begin":123,"end":132},"obj":"JJ"},{"id":"T385","span":{"begin":133,"end":145},"obj":"JJ"},{"id":"T386","span":{"begin":146,"end":156},"obj":"NNS"},{"id":"T387","span":{"begin":157,"end":159},"obj":"IN"},{"id":"T388","span":{"begin":160,"end":162},"obj":"NNP"},{"id":"T389","span":{"begin":163,"end":167},"obj":"NNS"},{"id":"T390","span":{"begin":168,"end":172},"obj":"NNP"},{"id":"T391","span":{"begin":172,"end":173},"obj":":"},{"id":"T392","span":{"begin":173,"end":175},"obj":"NNP"},{"id":"T393","span":{"begin":175,"end":176},"obj":"."}],"relations":[{"id":"R299","pred":"advmod","subj":"T365","obj":"T377"},{"id":"R300","pred":"punct","subj":"T366","obj":"T377"},{"id":"R301","pred":"det","subj":"T367","obj":"T369"},{"id":"R302","pred":"amod","subj":"T368","obj":"T369"},{"id":"R303","pred":"nsubj","subj":"T369","obj":"T377"},{"id":"R304","pred":"prep","subj":"T370","obj":"T369"},{"id":"R305","pred":"det","subj":"T371","obj":"T374"},{"id":"R306","pred":"amod","subj":"T372","obj":"T374"},{"id":"R307","pred":"compound","subj":"T373","obj":"T374"},{"id":"R308","pred":"pobj","subj":"T374","obj":"T370"},{"id":"R309","pred":"prep","subj":"T375","obj":"T369"},{"id":"R310","pred":"pobj","subj":"T376","obj":"T375"},{"id":"R311","pred":"ROOT","subj":"T377","obj":"T377"},{"id":"R312","pred":"amod","subj":"T378","obj":"T380"},{"id":"R313","pred":"amod","subj":"T379","obj":"T380"},{"id":"R314","pred":"dobj","subj":"T380","obj":"T377"},{"id":"R315","pred":"nsubj","subj":"T381","obj":"T382"},{"id":"R316","pred":"relcl","subj":"T382","obj":"T380"},{"id":"R317","pred":"det","subj":"T383","obj":"T386"},{"id":"R318","pred":"amod","subj":"T384","obj":"T386"},{"id":"R319","pred":"amod","subj":"T385","obj":"T386"},{"id":"R320","pred":"dobj","subj":"T386","obj":"T382"},{"id":"R321","pred":"prep","subj":"T387","obj":"T386"},{"id":"R322","pred":"compound","subj":"T388","obj":"T390"},{"id":"R323","pred":"compound","subj":"T389","obj":"T390"},{"id":"R324","pred":"pobj","subj":"T390","obj":"T387"},{"id":"R325","pred":"punct","subj":"T391","obj":"T390"},{"id":"R326","pred":"appos","subj":"T392","obj":"T390"},{"id":"R327","pred":"punct","subj":"T393","obj":"T377"}],"text":"Thus, the IKKβ-dependent modification of a specific amino acid in RPS3 promotes specific NF-κB functions that underlie the molecular pathogenetic mechanisms of E. coli O157:H7."}

    sentences

    {"project":"sentences","denotations":[{"id":"T99","span":{"begin":0,"end":176},"obj":"Sentence"},{"id":"T7","span":{"begin":0,"end":176},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Thus, the IKKβ-dependent modification of a specific amino acid in RPS3 promotes specific NF-κB functions that underlie the molecular pathogenetic mechanisms of E. coli O157:H7."}

    events-check-again

    {"project":"events-check-again","denotations":[{"id":"T590","span":{"begin":10,"end":14},"obj":"Protein"},{"id":"T591","span":{"begin":15,"end":24},"obj":"Regulation"},{"id":"T592","span":{"begin":25,"end":37},"obj":"Protein_modification"},{"id":"T593","span":{"begin":66,"end":70},"obj":"Protein"}],"relations":[{"id":"R463","pred":"causeOf","subj":"T590","obj":"T591"},{"id":"R464","pred":"themeOf","subj":"T592","obj":"T591"},{"id":"R465","pred":"themeOf","subj":"T593","obj":"T592"}],"text":"Thus, the IKKβ-dependent modification of a specific amino acid in RPS3 promotes specific NF-κB functions that underlie the molecular pathogenetic mechanisms of E. coli O157:H7."}

    bionlp-st-ge-2016-reference-tees

    {"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T526","span":{"begin":10,"end":14},"obj":"Protein"},{"id":"T527","span":{"begin":66,"end":70},"obj":"Protein"},{"id":"T528","span":{"begin":89,"end":94},"obj":"Protein"},{"id":"T529","span":{"begin":71,"end":79},"obj":"Positive_regulation"}],"relations":[{"id":"R411","pred":"themeOf","subj":"T528","obj":"T529"}],"text":"Thus, the IKKβ-dependent modification of a specific amino acid in RPS3 promotes specific NF-κB functions that underlie the molecular pathogenetic mechanisms of E. coli O157:H7."}

    bionlp-st-ge-2016-reference

    {"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T90","span":{"begin":10,"end":14},"obj":"Protein"},{"id":"T91","span":{"begin":15,"end":24},"obj":"Regulation"},{"id":"T92","span":{"begin":25,"end":37},"obj":"Protein_modification"},{"id":"T93","span":{"begin":66,"end":70},"obj":"Protein"}],"relations":[{"id":"R75","pred":"causeOf","subj":"T90","obj":"T91"},{"id":"R76","pred":"themeOf","subj":"T92","obj":"T91"},{"id":"R77","pred":"themeOf","subj":"T93","obj":"T92"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"Thus, the IKKβ-dependent modification of a specific amino acid in RPS3 promotes specific NF-κB functions that underlie the molecular pathogenetic mechanisms of E. coli O157:H7."}

    test2

    {"project":"test2","denotations":[{"id":"T60","span":{"begin":10,"end":14},"obj":"Protein"},{"id":"T61","span":{"begin":66,"end":70},"obj":"Protein"}],"text":"Thus, the IKKβ-dependent modification of a specific amino acid in RPS3 promotes specific NF-κB functions that underlie the molecular pathogenetic mechanisms of E. coli O157:H7."}