PMC:3062687 / 7516-7695
Annnotations
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T5586 | 31-35 | P23396 | denotes | RPS3 |
T5587 | 91-95 | P25963 | denotes | IκBα |
T5588 | 102-106 | P25963 | denotes | IκBα |
T5589 | 134-138 | O14920 | denotes | IKKβ |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T5291 | 0-2 | PRP | denotes | We |
T5292 | 3-11 | VB | denotes | measured |
T5293 | 12-15 | DT | denotes | the |
T5294 | 16-27 | NN | denotes | association |
T5295 | 28-30 | IN | denotes | of |
T5296 | 31-35 | NN | denotes | RPS3 |
T5297 | 36-40 | IN | denotes | with |
T5298 | 41-51 | NN | denotes | importin-α |
T5299 | 52-54 | IN | denotes | in |
T5300 | 55-59 | NN | denotes | 293T |
T5301 | 60-65 | NN | denotes | cells |
T5302 | 66-80 | VB | denotes | overexpressing |
T5303 | 81-90 | JJ | denotes | wild-type |
T5304 | 91-95 | NN | denotes | IκBα |
T5305 | 96-98 | CC | denotes | or |
T5306 | 99-101 | DT | denotes | an |
T5307 | 102-106 | NN | denotes | IκBα |
T5308 | 107-113 | NN | denotes | mutant |
T5309 | 114-115 | -LRB- | denotes | ( |
T5310 | 115-119 | NN | denotes | SSAA |
T5311 | 119-120 | -RRB- | denotes | ) |
T5312 | 121-130 | JJ | denotes | resistant |
T5313 | 131-133 | TO | denotes | to |
T5314 | 134-146 | JJ | denotes | IKKβ-induced |
T5315 | 147-162 | NN | denotes | phosphorylation |
T5316 | 163-166 | CC | denotes | and |
T5317 | 167-178 | NN | denotes | degradation |
R4221 | T5291 | T5292 | arg1Of | We,measured |
R4222 | T5294 | T5293 | arg1Of | association,the |
R4223 | T5294 | T5295 | arg1Of | association,of |
R4224 | T5294 | T5297 | arg1Of | association,with |
R4225 | T5294 | T5299 | arg1Of | association,in |
R4226 | T5294 | T5305 | arg1Of | association,or |
R4227 | T5296 | T5295 | arg2Of | RPS3,of |
R4228 | T5298 | T5297 | arg2Of | importin-α,with |
R4229 | T5301 | T5299 | arg2Of | cells,in |
R4230 | T5301 | T5300 | arg1Of | cells,293T |
R4231 | T5301 | T5302 | arg1Of | cells,overexpressing |
R4232 | T5304 | T5302 | arg2Of | IκBα,overexpressing |
R4233 | T5304 | T5303 | arg1Of | IκBα,wild-type |
R4234 | T5305 | T5292 | arg2Of | or,measured |
R4235 | T5308 | T5305 | arg2Of | mutant,or |
R4236 | T5308 | T5306 | arg1Of | mutant,an |
R4237 | T5308 | T5307 | arg1Of | mutant,IκBα |
R4238 | T5308 | T5309 | arg1Of | mutant,( |
R4239 | T5308 | T5312 | arg1Of | mutant,resistant |
R4240 | T5310 | T5309 | arg2Of | SSAA,( |
R4241 | T5311 | T5309 | arg3Of | ),( |
R4242 | T5312 | T5313 | arg1Of | resistant,to |
R4243 | T5315 | T5316 | arg1Of | phosphorylation,and |
R4244 | T5316 | T5313 | arg2Of | and,to |
R4245 | T5316 | T5314 | arg1Of | and,IKKβ-induced |
R4246 | T5317 | T5316 | arg2Of | degradation,and |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T5757 | 0-2 | PRP | denotes | We |
T5758 | 3-11 | VBD | denotes | measured |
T5759 | 12-15 | DT | denotes | the |
T5760 | 16-27 | NN | denotes | association |
T5761 | 28-30 | IN | denotes | of |
T5762 | 31-35 | CD | denotes | RPS3 |
T5763 | 36-40 | IN | denotes | with |
T5764 | 41-51 | JJ | denotes | importin-α |
T5765 | 52-54 | IN | denotes | in |
T5766 | 55-59 | JJ | denotes | 293T |
T5767 | 60-65 | NNS | denotes | cells |
T5768 | 66-80 | VBG | denotes | overexpressing |
T5769 | 81-90 | JJ | denotes | wild-type |
T5770 | 91-95 | NNP | denotes | IκBα |
T5771 | 96-98 | CC | denotes | or |
T5772 | 99-101 | DT | denotes | an |
T5773 | 102-106 | NNP | denotes | IκBα |
T5774 | 107-113 | JJ | denotes | mutant |
T5775 | 114-115 | -LRB- | denotes | ( |
T5776 | 115-119 | NNP | denotes | SSAA |
T5777 | 119-120 | -RRB- | denotes | ) |
T5778 | 121-130 | NN | denotes | resistant |
T5779 | 131-133 | TO | denotes | to |
T5780 | 134-146 | JJ | denotes | IKKβ-induced |
T5781 | 147-162 | NN | denotes | phosphorylation |
T5782 | 163-166 | CC | denotes | and |
T5783 | 167-178 | NN | denotes | degradation |
T5784 | 178-179 | . | denotes | . |
R4650 | T5771 | T5770 | cc | or,IκBα |
R4651 | T5772 | T5774 | det | an,mutant |
R4652 | T5773 | T5774 | compound | IκBα,mutant |
R4653 | T5774 | T5770 | conj | mutant,IκBα |
R4654 | T5775 | T5776 | punct | (,SSAA |
R4655 | T5776 | T5774 | appos | SSAA,mutant |
R4656 | T5777 | T5774 | punct | ),mutant |
R4657 | T5778 | T5768 | conj | resistant,overexpressing |
R4658 | T5779 | T5778 | prep | to,resistant |
R4659 | T5780 | T5781 | advmod | IKKβ-induced,phosphorylation |
R4660 | T5781 | T5779 | pobj | phosphorylation,to |
R4661 | T5782 | T5781 | cc | and,phosphorylation |
R4662 | T5783 | T5781 | conj | degradation,phosphorylation |
R4663 | T5784 | T5758 | punct | .,measured |
R4636 | T5757 | T5758 | nsubj | We,measured |
R4637 | T5758 | T5758 | ROOT | measured,measured |
R4638 | T5759 | T5760 | det | the,association |
R4639 | T5760 | T5758 | dobj | association,measured |
R4640 | T5761 | T5760 | prep | of,association |
R4641 | T5762 | T5761 | pobj | RPS3,of |
R4642 | T5763 | T5762 | prep | with,RPS3 |
R4643 | T5764 | T5763 | pobj | importin-α,with |
R4644 | T5765 | T5764 | prep | in,importin-α |
R4645 | T5766 | T5767 | amod | 293T,cells |
R4646 | T5767 | T5765 | pobj | cells,in |
R4647 | T5768 | T5758 | advcl | overexpressing,measured |
R4648 | T5769 | T5770 | compound | wild-type,IκBα |
R4649 | T5770 | T5768 | dobj | IκBα,overexpressing |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T6178 | 167-178 | http://purl.obolibrary.org/obo/GO_0009056 | denotes | degradation |
T6191 | 147-162 | http://purl.obolibrary.org/obo/GO_0016310 | denotes | phosphorylation |
GO-CC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T6202 | 60-65 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T5149 | 0-179 | Sentence | denotes | We measured the association of RPS3 with importin-α in 293T cells overexpressing wild-type IκBα or an IκBα mutant (SSAA) resistant to IKKβ-induced phosphorylation and degradation. |
T57 | 0-179 | Sentence | denotes | We measured the association of RPS3 with importin-α in 293T cells overexpressing wild-type IκBα or an IκBα mutant (SSAA) resistant to IKKβ-induced phosphorylation and degradation. |
events-check-again
Id | Subject | Object | Predicate | Lexical cue | Speculation |
---|---|---|---|---|---|
T6686 | 16-27 | Binding | denotes | association | true |
T6687 | 31-35 | Protein | denotes | RPS3 | |
T6688 | 91-95 | Protein | denotes | IκBα | |
T6689 | 102-106 | Protein | denotes | IκBα | |
T6690 | 115-119 | Negative_regulation | denotes | SSAA | |
T6691 | 121-130 | Negative_regulation | denotes | resistant | |
T6692 | 121-130 | Negative_regulation | denotes | resistant | |
T6693 | 134-138 | Protein | denotes | IKKβ | |
T6694 | 139-146 | Positive_regulation | denotes | induced | |
T6695 | 139-146 | Positive_regulation | denotes | induced | |
T6696 | 147-162 | Phosphorylation | denotes | phosphorylation | |
T6697 | 167-178 | Protein_catabolism | denotes | degradation | |
R5328 | T6687 | T6686 | themeOf | RPS3,association | |
R5330 | T6689 | T6690 | themeOf | IκBα,SSAA | |
R5331 | T6689 | T6696 | themeOf | IκBα,phosphorylation | |
R5332 | T6689 | T6697 | themeOf | IκBα,degradation | |
R5333 | T6690 | T6692 | causeOf | SSAA,resistant | |
R5334 | T6690 | T6691 | causeOf | SSAA,resistant | |
R5336 | T6693 | T6695 | causeOf | IKKβ,induced | |
R5338 | T6693 | T6694 | causeOf | IKKβ,induced | |
R5340 | T6694 | T6691 | themeOf | induced,resistant | |
R5343 | T6695 | T6692 | themeOf | induced,resistant | |
R5347 | T6696 | T6695 | themeOf | phosphorylation,induced | |
R5349 | T6697 | T6694 | themeOf | degradation,induced |
bionlp-st-ge-2016-reference-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T6250 | 31-35 | Protein | denotes | RPS3 |
T6251 | 81-95 | Protein | denotes | wild-type IκBα |
T6252 | 102-113 | Protein | denotes | IκBα mutant |
T6253 | 115-119 | Protein | denotes | SSAA |
T6254 | 134-138 | Protein | denotes | IKKβ |
T6255 | 16-27 | Binding | denotes | association |
T6256 | 66-80 | Positive_regulation | denotes | overexpressing |
T6257 | 66-80 | Positive_regulation | denotes | overexpressing |
T6258 | 66-80 | Positive_regulation | denotes | overexpressing |
T6259 | 147-162 | Phosphorylation | denotes | phosphorylation |
T6260 | 147-162 | Phosphorylation | denotes | phosphorylation |
T6261 | 167-178 | Protein_catabolism | denotes | degradation |
T6262 | 167-178 | Protein_catabolism | denotes | degradation |
T6263 | 121-130 | Positive_regulation | denotes | resistant |
T6264 | 121-130 | Positive_regulation | denotes | resistant |
T6265 | 139-146 | Positive_regulation | denotes | induced |
T6266 | 139-146 | Positive_regulation | denotes | induced |
R5037 | T6250 | T6255 | themeOf | RPS3,association |
R5038 | T6251 | T6256 | themeOf | wild-type IκBα,overexpressing |
R5039 | T6252 | T6257 | themeOf | IκBα mutant,overexpressing |
R5040 | T6252 | T6259 | themeOf | IκBα mutant,phosphorylation |
R5041 | T6252 | T6261 | themeOf | IκBα mutant,degradation |
R5042 | T6253 | T6258 | themeOf | SSAA,overexpressing |
R5043 | T6253 | T6260 | themeOf | SSAA,phosphorylation |
R5044 | T6253 | T6262 | themeOf | SSAA,degradation |
R5045 | T6254 | T6265 | causeOf | IKKβ,induced |
R5046 | T6254 | T6266 | causeOf | IKKβ,induced |
R5047 | T6259 | T6265 | themeOf | phosphorylation,induced |
R5048 | T6260 | T6266 | themeOf | phosphorylation,induced |
R5049 | T6261 | T6263 | themeOf | degradation,resistant |
R5050 | T6262 | T6264 | themeOf | degradation,resistant |
bionlp-st-ge-2016-reference
Id | Subject | Object | Predicate | Lexical cue | Speculation |
---|---|---|---|---|---|
T5064 | 16-27 | Binding | denotes | association | true |
T5065 | 31-35 | Protein | denotes | RPS3 | |
T5066 | 91-95 | Protein | denotes | IκBα | |
T5067 | 102-106 | Protein | denotes | IκBα | |
T5068 | 115-119 | Negative_regulation | denotes | SSAA | |
T5069 | 121-130 | Negative_regulation | denotes | resistant | |
T5070 | 121-130 | Negative_regulation | denotes | resistant | |
T5071 | 134-138 | Protein | denotes | IKKβ | |
T5072 | 139-146 | Positive_regulation | denotes | induced | |
T5073 | 139-146 | Positive_regulation | denotes | induced | |
T5074 | 147-162 | Phosphorylation | denotes | phosphorylation | |
T5075 | 167-178 | Protein_catabolism | denotes | degradation | |
R4030 | T5065 | T5064 | themeOf | RPS3,association | |
R4031 | T5067 | T5068 | themeOf | IκBα,SSAA | |
R4032 | T5067 | T5074 | themeOf | IκBα,phosphorylation | |
R4033 | T5067 | T5075 | themeOf | IκBα,degradation | |
R4034 | T5068 | T5070 | causeOf | SSAA,resistant | |
R4035 | T5068 | T5069 | causeOf | SSAA,resistant | |
R4036 | T5071 | T5073 | causeOf | IKKβ,induced | |
R4037 | T5071 | T5072 | causeOf | IKKβ,induced | |
R4038 | T5072 | T5069 | themeOf | induced,resistant | |
R4039 | T5073 | T5070 | themeOf | induced,resistant | |
R4040 | T5074 | T5073 | themeOf | phosphorylation,induced | |
R4041 | T5075 | T5072 | themeOf | degradation,induced |
test2
Id | Subject | Object | Predicate | Lexical cue | Negation | Speculation |
---|---|---|---|---|---|---|
T4952 | 16-27 | Binding | denotes | association | ||
T4953 | 31-35 | Protein | denotes | RPS3 | ||
T4954 | 66-80 | Gene_expression | denotes | overexpressing | true | |
T4955 | 91-95 | Protein | denotes | IκBα | ||
T4956 | 102-106 | Protein | denotes | IκBα | true | |
T4957 | 115-119 | Negative_regulation | denotes | SSAA | ||
T4958 | 134-138 | Protein | denotes | IKKβ | ||
T4959 | 139-146 | Positive_regulation | denotes | induced | true | |
T4960 | 147-162 | Phosphorylation | denotes | phosphorylation | ||
T4961 | 167-178 | Protein_catabolism | denotes | degradation | true | |
R3950 | T4953 | T4952 | themeOf | RPS3,association | ||
R3951 | T4955 | T4954 | themeOf | IκBα,overexpressing | ||
R3952 | T4956 | T4957 | themeOf | IκBα,SSAA | ||
R3953 | T4956 | T4961 | themeOf | IκBα,degradation | ||
R3954 | T4956 | T4960 | themeOf | IκBα,phosphorylation | ||
R3955 | T4958 | T4959 | causeOf | IKKβ,induced | ||
R3956 | T4960 | T4959 | themeOf | phosphorylation,induced | ||
R3957 | T4961 | T4959 | themeOf | degradation,induced |